RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 PDE6AP16499 860 aa5.82□□□□□ -1.48
GPNMB-207ENST00000468723 RPL13P26373 211 aaKnown RBP5.82□□□□□ -1.48
GPNMB-207ENST00000468723 PRAMEF18Q5VWM3 479 aa5.82□□□□□ -1.48
GPNMB-207ENST00000468723 MCTP2Q6DN12 878 aa5.82□□□□□ -1.48
GPNMB-207ENST00000468723 KCTD1Q719H9 257 aa5.82□□□□□ -1.48
GPNMB-207ENST00000468723 PTRH1Q86Y79 214 aaKnown RBP5.82□□□□□ -1.48
GPNMB-207ENST00000468723 DDX1Q92499 740 aaKnown RBP5.82□□□□□ -1.48
GPNMB-207ENST00000468723 MAGEB10Q96LZ2 347 aaPredicted RBP5.82□□□□□ -1.48
GPNMB-207ENST00000468723 KRTAP17-1Q9BYP8 105 aa5.82□□□□□ -1.48
GPNMB-207ENST00000468723 USP40Q9NVE5 1235 aa5.82□□□□□ -1.48
GPNMB-207ENST00000468723 NUB1Q9Y5A7 615 aa5.82□□□□□ -1.48
GPNMB-207ENST00000468723 CCDC66A2RUB6 948 aa5.81□□□□□ -1.48
GPNMB-207ENST00000468723 AMY2AP04746 511 aa5.81□□□□□ -1.48
GPNMB-207ENST00000468723 FAHP16930 419 aa5.81□□□□□ -1.48
GPNMB-207ENST00000468723 NAT1P18440 290 aa5.81□□□□□ -1.48
GPNMB-207ENST00000468723 AMY2BP19961 511 aa5.81□□□□□ -1.48
GPNMB-207ENST00000468723 JAM2P57087 298 aa5.81□□□□□ -1.48
GPNMB-207ENST00000468723 SQSTM1Q13501 440 aa5.81□□□□□ -1.48
GPNMB-207ENST00000468723 RTP5Q14D33 572 aa5.81□□□□□ -1.48
GPNMB-207ENST00000468723 GPR19Q15760 415 aa5.81□□□□□ -1.48
GPNMB-207ENST00000468723 BTBD8Q5XKL5 378 aa5.81□□□□□ -1.48
GPNMB-207ENST00000468723 EP400NLQ6ZTU2 488 aa5.81□□□□□ -1.48
GPNMB-207ENST00000468723 C16orf59Q7L2K0 433 aa5.81□□□□□ -1.48
GPNMB-207ENST00000468723 FGD2Q7Z6J4 655 aa5.81□□□□□ -1.48
GPNMB-207ENST00000468723 ZNF761Q86XN6 746 aaPredicted RBP5.81□□□□□ -1.48
GPNMB-207ENST00000468723 PROSER1Q86XN7 944 aa5.81□□□□□ -1.48
GPNMB-207ENST00000468723 CISD2Q8N5K1 135 aaKnown RBP5.81□□□□□ -1.48
GPNMB-207ENST00000468723 GSTCDQ8NEC7 633 aa5.81□□□□□ -1.48
GPNMB-207ENST00000468723 TTLL11Q8NHH1 800 aa5.81□□□□□ -1.48
GPNMB-207ENST00000468723 ADAMTS17Q8TE56 1095 aa5.81□□□□□ -1.48
GPNMB-207ENST00000468723 SH3TC2Q8TF17 1288 aa5.81□□□□□ -1.48
GPNMB-207ENST00000468723 SCLYQ96I15 445 aa5.81□□□□□ -1.48
GPNMB-207ENST00000468723 CLIC6Q96NY7 704 aa5.81□□□□□ -1.48
GPNMB-207ENST00000468723 PIF1Q9H611 641 aa5.81□□□□□ -1.48
GPNMB-207ENST00000468723 SFMBT1Q9UHJ3 866 aa5.81□□□□□ -1.48
GPNMB-207ENST00000468723 COQ6Q9Y2Z9 468 aa5.81□□□□□ -1.48
GPNMB-207ENST00000468723 ACOT7O00154 380 aa5.8□□□□□ -1.48
GPNMB-207ENST00000468723 EFCAB14O75071 495 aa5.8□□□□□ -1.48
GPNMB-207ENST00000468723 RAPGEF3O95398 923 aa5.8□□□□□ -1.48
GPNMB-207ENST00000468723 CKMP06732 381 aa5.8□□□□□ -1.48
GPNMB-207ENST00000468723 GLRBP48167 497 aa5.8□□□□□ -1.48
GPNMB-207ENST00000468723 MLLT6P55198 1093 aaPredicted RBP5.8□□□□□ -1.48
GPNMB-207ENST00000468723 CRY1Q16526 586 aa5.8□□□□□ -1.48
GPNMB-207ENST00000468723 FAM47CQ5HY64 1035 aa5.8□□□□□ -1.48
GPNMB-207ENST00000468723 PRR31Q5SQ13 230 aa5.8□□□□□ -1.48
GPNMB-207ENST00000468723 VASNQ6EMK4 673 aa5.8□□□□□ -1.48
GPNMB-207ENST00000468723 BRAPQ7Z569 592 aa5.8□□□□□ -1.48
GPNMB-207ENST00000468723 NCOA5Q9HCD5 579 aaKnown RBP5.8□□□□□ -1.48
GPNMB-207ENST00000468723 RIC8BQ9NVN3 520 aa5.8□□□□□ -1.48
GPNMB-207ENST00000468723 SRPK3Q9UPE1 567 aa5.8□□□□□ -1.48
GPNMB-207ENST00000468723 CCDC163A0A0D9SF12 145 aa5.79□□□□□ -1.48
GPNMB-207ENST00000468723 FAM90A27PA6NNH2 459 aa5.79□□□□□ -1.48
GPNMB-207ENST00000468723 MAN2B1O00754 1011 aa5.79□□□□□ -1.48
GPNMB-207ENST00000468723 WNT9AO14904 365 aa5.79□□□□□ -1.48
GPNMB-207ENST00000468723 GSTA4O15217 222 aa5.79□□□□□ -1.48
GPNMB-207ENST00000468723 NOBOXO60393 691 aa5.79□□□□□ -1.48
GPNMB-207ENST00000468723 APPP05067 770 aa5.79□□□□□ -1.48
GPNMB-207ENST00000468723 IL13P35225 146 aa5.79□□□□□ -1.48
GPNMB-207ENST00000468723 EPHA5P54756 1037 aa5.79□□□□□ -1.48
GPNMB-207ENST00000468723 GJA9P57773 515 aa5.79□□□□□ -1.48
GPNMB-207ENST00000468723 NFIXQ14938 502 aa5.79□□□□□ -1.48
GPNMB-207ENST00000468723 RGL3Q3MIN7 710 aa5.79□□□□□ -1.48
GPNMB-207ENST00000468723 TRIM61Q5EBN2 209 aa5.79□□□□□ -1.48
GPNMB-207ENST00000468723 FERMT3Q86UX7 667 aa5.79□□□□□ -1.48
GPNMB-207ENST00000468723 TXNDC5Q8NBS9 432 aaKnown RBP5.79□□□□□ -1.48
GPNMB-207ENST00000468723 TMEM209Q96SK2 561 aa5.79□□□□□ -1.48
GPNMB-207ENST00000468723 MRPL4Q9BYD3 311 aaKnown RBP5.79□□□□□ -1.48
GPNMB-207ENST00000468723 RAPGEFL1Q9UHV5 662 aa5.79□□□□□ -1.48
GPNMB-207ENST00000468723 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.78□□□□□ -1.48
GPNMB-207ENST00000468723 ZNF561-AS1K7EIQ3 104 aa5.78□□□□□ -1.48
GPNMB-207ENST00000468723 PPP1R12AO14974 1030 aaPredicted RBP5.78□□□□□ -1.48
GPNMB-207ENST00000468723 PRICKLE3O43900 615 aaPredicted RBP5.78□□□□□ -1.48
GPNMB-207ENST00000468723 PTPN1P18031 435 aaKnown RBP5.78□□□□□ -1.48
GPNMB-207ENST00000468723 PFKPQ01813 784 aa5.78□□□□□ -1.48
GPNMB-207ENST00000468723 CD276Q5ZPR3 534 aa5.78□□□□□ -1.48
GPNMB-207ENST00000468723 TRMT10BQ6PF06 316 aaKnown RBP5.78□□□□□ -1.48
GPNMB-207ENST00000468723 NLGN4XQ8N0W4 816 aa5.78□□□□□ -1.48
GPNMB-207ENST00000468723 RELTQ969Z4 430 aa5.78□□□□□ -1.48
GPNMB-207ENST00000468723 CLUHP3Q96NS8 147 aa5.78□□□□□ -1.48
GPNMB-207ENST00000468723 L2HGDHQ9H9P8 463 aa5.78□□□□□ -1.48
GPNMB-207ENST00000468723 SMURF1Q9HCE7 757 aa5.78□□□□□ -1.48
GPNMB-207ENST00000468723 TRIM39Q9HCM9 518 aa5.78□□□□□ -1.48
GPNMB-207ENST00000468723 SLC39A2Q9NP94 309 aa5.78□□□□□ -1.48
GPNMB-207ENST00000468723 HSPBP1Q9NZL4 362 aa5.78□□□□□ -1.48
GPNMB-207ENST00000468723 ATP23Q9Y6H3 246 aa5.78□□□□□ -1.48
GPNMB-207ENST00000468723 DUSP10Q9Y6W6 482 aa5.78□□□□□ -1.48
GPNMB-207ENST00000468723 TCRBV16S1A1N1A0A5B0 115 aa5.77□□□□□ -1.49
GPNMB-207ENST00000468723 KRTAP9-7A8MTY7 169 aa5.77□□□□□ -1.49
GPNMB-207ENST00000468723 PLD2O14939 933 aa5.77□□□□□ -1.49
GPNMB-207ENST00000468723 CYP1A1P04798 512 aaPredicted RBP5.77□□□□□ -1.49
GPNMB-207ENST00000468723 ENO2P09104 434 aaPredicted RBP5.77□□□□□ -1.49
GPNMB-207ENST00000468723 ZNF28P17035 718 aa5.77□□□□□ -1.49
GPNMB-207ENST00000468723 SKIDA1Q1XH10 827 aa5.77□□□□□ -1.49
GPNMB-207ENST00000468723 UBXN11Q5T124 520 aa5.77□□□□□ -1.49
GPNMB-207ENST00000468723 CPZQ66K79 652 aa5.77□□□□□ -1.49
GPNMB-207ENST00000468723 ABHD17CQ6PCB6 329 aa5.77□□□□□ -1.49
GPNMB-207ENST00000468723 FRMD5Q7Z6J6 570 aa5.77□□□□□ -1.49
GPNMB-207ENST00000468723 DTX3Q8N9I9 347 aa5.77□□□□□ -1.49
GPNMB-207ENST00000468723 ZCCHC14Q8WYQ9 949 aaKnown RBP5.77□□□□□ -1.49
GPNMB-207ENST00000468723 RTEL1Q9NZ71 1219 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms