RNA–Protein interactions for RNA: ENST00000468621.5

SND1-207, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-207ENST00000468621 CNGA4Q8IV77 575 aa6.21□□□□□ -1.42
SND1-207ENST00000468621 GRAMD1CQ8IYS0 662 aa6.21□□□□□ -1.42
SND1-207ENST00000468621 ZNF654Q8IZM8 581 aa6.21□□□□□ -1.42
SND1-207ENST00000468621 ABRAQ8N0Z2 381 aa6.21□□□□□ -1.42
SND1-207ENST00000468621 FANCBQ8NB91 859 aa6.21□□□□□ -1.42
SND1-207ENST00000468621 NUP133Q8WUM0 1156 aa6.21□□□□□ -1.42
SND1-207ENST00000468621 ESR2Q92731 530 aa6.21□□□□□ -1.42
SND1-207ENST00000468621 FERMT2Q96AC1 680 aa6.21□□□□□ -1.42
SND1-207ENST00000468621 PAGE5Q96GU1 130 aa6.21□□□□□ -1.42
SND1-207ENST00000468621 PYM1Q9BRP8 204 aaKnown RBP6.21□□□□□ -1.42
SND1-207ENST00000468621 UBAC1Q9BSL1 405 aa6.21□□□□□ -1.42
SND1-207ENST00000468621 DESI2Q9BSY9 194 aa6.21□□□□□ -1.42
SND1-207ENST00000468621 RNF26Q9BY78 433 aaPredicted RBP6.21□□□□□ -1.42
SND1-207ENST00000468621 CSRNP2Q9H175 543 aa6.21□□□□□ -1.42
SND1-207ENST00000468621 ACBD3Q9H3P7 528 aa6.21□□□□□ -1.42
SND1-207ENST00000468621 MROH8Q9H579 483 aa6.21□□□□□ -1.42
SND1-207ENST00000468621 MRPL44Q9H9J2 332 aaKnown RBP6.21□□□□□ -1.42
SND1-207ENST00000468621 SLC38A10Q9HBR0 1119 aa6.21□□□□□ -1.42
SND1-207ENST00000468621 PSD3Q9NYI0 1048 aa6.21□□□□□ -1.42
SND1-207ENST00000468621 CDC23Q9UJX2 597 aa6.21□□□□□ -1.42
SND1-207ENST00000468621 FEM1BQ9UK73 627 aa6.21□□□□□ -1.42
SND1-207ENST00000468621 PCDHB6Q9Y5E3 794 aa6.21□□□□□ -1.42
SND1-207ENST00000468621 ADGRG1Q9Y653 693 aa6.21□□□□□ -1.42
SND1-207ENST00000468621 IVNS1ABPQ9Y6Y0 642 aa6.21□□□□□ -1.42
SND1-207ENST00000468621 ZNF536O15090 1300 aa6.21□□□□□ -1.42
SND1-207ENST00000468621 ITIH6Q6UXX5 1313 aa6.21□□□□□ -1.42
SND1-207ENST00000468621 RPTORQ8N122 1335 aa6.21□□□□□ -1.42
SND1-207ENST00000468621 EYSQ5T1H1 3165 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 SOWAHDA6NJG2 315 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 H0YGN5 161 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 FANCGO15287 622 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 TEX33O43247 280 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 PRPF3O43395 683 aaKnown RBP6.2□□□□□ -1.42
SND1-207ENST00000468621 MFAP3LO75121 409 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 SASH3O75995 380 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 SGPL1O95470 568 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 CALM1P0DP23 149 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 CALM2P0DP24 149 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 CALM3P0DP25 149 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 SNHG28P0DPA3 235 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 FCER1AP12319 257 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 CCND3P30281 292 aaPredicted RBP6.2□□□□□ -1.42
SND1-207ENST00000468621 SLC16A2P36021 539 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 AFMP43652 599 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 NT5C2P49902 561 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 STX17P56962 302 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 CACNB2Q08289 660 aaPredicted RBP6.2□□□□□ -1.42
SND1-207ENST00000468621 NR5A1Q13285 461 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 CUL4BQ13620 913 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 SEC23AQ15436 765 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 WHAMMP3Q1A5X7 153 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 LONRF2Q1L5Z9 754 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 MUM1L1Q5H9M0 696 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 ZNF569Q5MCW4 686 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 CDKAL1Q5VV42 579 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 TTBK2Q6IQ55 1244 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 KLHL10Q6JEL2 608 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 BTNL9Q6UXG8 535 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 RAD9BQ6WBX8 426 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.2□□□□□ -1.42
SND1-207ENST00000468621 SH3RF1Q7Z6J0 888 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 UBE2Q1Q7Z7E8 422 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 CATIPQ7Z7H3 387 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 IQCA1Q86XH1 822 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 DGKHQ86XP1 1220 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 CPXCR1Q8N123 301 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 MSL3Q8N5Y2 521 aaKnown RBP6.2□□□□□ -1.42
SND1-207ENST00000468621 ENAHQ8N8S7 591 aaPredicted RBP6.2□□□□□ -1.42
SND1-207ENST00000468621 SPATA20Q8TB22 786 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 U2AF1L4Q8WU68 220 aaKnown RBP6.2□□□□□ -1.42
SND1-207ENST00000468621 CHURC1Q8WUH1 139 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 DCAF4Q8WV16 495 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 CPLX3Q8WVH0 158 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 HNRNPLLQ8WVV9 542 aaKnown RBP6.2□□□□□ -1.42
SND1-207ENST00000468621 ANKS1AQ92625 1134 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 EXOC4Q96A65 974 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 DEFB118Q96PH6 123 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 GSDMAQ96QA5 445 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 NAPGQ99747 312 aaPredicted RBP6.2□□□□□ -1.42
SND1-207ENST00000468621 TEX13BQ9BXU2 312 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 FUT8Q9BYC5 575 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 CRISPLD2Q9H0B8 497 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.2□□□□□ -1.42
SND1-207ENST00000468621 EPC1Q9H2F5 836 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 RAVER2Q9HCJ3 691 aaKnown RBP6.2□□□□□ -1.42
SND1-207ENST00000468621 LZTFL1Q9NQ48 299 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 RBM28Q9NW13 759 aaKnown RBP6.2□□□□□ -1.42
SND1-207ENST00000468621 RMND1Q9NWS8 449 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 ADD3Q9UEY8 706 aaKnown RBP6.2□□□□□ -1.42
SND1-207ENST00000468621 LIMA1Q9UHB6 759 aaKnown RBP6.2□□□□□ -1.42
SND1-207ENST00000468621 PRR12Q9ULL5 1215 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 MTMR7Q9Y216 660 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 LOXHD1Q8IVV2 1947 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 SCN10AQ9Y5Y9 1956 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 TNKSO95271 1327 aa6.2□□□□□ -1.42
SND1-207ENST00000468621 FRMPD2Q68DX3 1309 aaPredicted RBP6.2□□□□□ -1.42
SND1-207ENST00000468621 PRUNE2Q8WUY3 3088 aa6.19□□□□□ -1.42
SND1-207ENST00000468621 DNAJC25-GNG10A0A024R161 153 aa6.19□□□□□ -1.42
SND1-207ENST00000468621 CTAGE15A4D2H0 777 aa6.19□□□□□ -1.42
SND1-207ENST00000468621 PPP1R3GB7ZBB8 358 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms