RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 NPHP1O15259 732 aa4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 FGF10O15520 208 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 PCDHGA12O60330 932 aa4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 KDM1AO60341 852 aa4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 OFD1O75665 1012 aa4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 MYBP10242 640 aa4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 ENDOUP21128 410 aaKnown RBP4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 LPOP22079 712 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 HTRA3P83110 453 aa4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 LACTBP83111 547 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 CYP27A1Q02318 531 aa4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 ADCY1Q08828 1119 aa4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 TMEM132BQ14DG7 1078 aa4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 GPR19Q15760 415 aa4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 DUSP27Q5VZP5 1158 aa4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 CYP2R1Q6VVX0 501 aa4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 ZPBP2Q6X784 338 aa4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 FRMD7Q6ZUT3 714 aa4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 WAPLQ7Z5K2 1190 aa4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 CREG2Q8IUH2 290 aa4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 CLEC10AQ8IUN9 316 aa4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 MIER2Q8N344 545 aa4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 SYTL4Q96C24 671 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 TNIP3Q96KP6 325 aa4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 PRDM16Q9HAZ2 1276 aa4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 DNAJC28Q9NX36 388 aa4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 MARCH2Q9P0N8 246 aa4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 DDX20Q9UHI6 824 aaKnown RBP4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 TAGLN3Q9UI15 199 aa4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 FBXL7Q9UJT9 491 aa4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 PCDHGA9Q9Y5G4 932 aaKnown RBP4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 PCDHGA8Q9Y5G5 932 aa4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 PCDHGA7Q9Y5G6 932 aa4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 PCDHGA6Q9Y5G7 932 aa4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 PCDHGA3Q9Y5H0 932 aa4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 PCDHGA2Q9Y5H1 932 aa4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 PCDHA11Q9Y5I1 949 aa4.69□□□□□ -1.66
HMGB1P25-201ENST00000468402 KRTAP4-8A0A0G2JLE6 195 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 A0A1W2PQ27 194 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 A0A1W2PQ64 194 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 A0A1W2PQC6 194 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 A0A1W2PQD8 194 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 RASSF10A6NK89 507 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 FZD9O00144 591 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 APAF1O14727 1248 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 DGKIO75912 1065 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 ASGR2P07307 311 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 MYL3P08590 195 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 ZNF865P0CJ78 1059 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 MORC3Q14149 939 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 GBX1Q14549 363 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 RALBP1Q15311 655 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 C4orf46Q504U0 113 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 CPZQ66K79 652 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 RNF111Q6ZNA4 994 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 Q6ZS46 218 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 ZNF765Q7L2R6 523 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 FAM214BQ7L5A3 538 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 OTOP1Q7RTM1 612 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 MORC1Q86VD1 984 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 TEX2Q8IWB9 1127 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 ARMC10Q8N2F6 343 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 ZNF610Q8N9Z0 462 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 VPS37AQ8NEZ2 397 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 PARD3BQ8TEW8 1205 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 FBXO41Q8TF61 875 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 UBE2Q2Q8WVN8 375 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 E2F7Q96AV8 911 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 TEKT5Q96M29 485 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 HSPA12BQ96MM6 686 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 AIFM3Q96NN9 605 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 NUP88Q99567 741 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 ZDHHC5Q9C0B5 715 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 CSRNP2Q9H175 543 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 SMURF1Q9HCE7 757 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 C1orf112Q9NSG2 853 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 GULP1Q9UBP9 304 aa4.68□□□□□ -1.66
HMGB1P25-201ENST00000468402 HMX2A2RU54 273 aa4.67□□□□□ -1.66
HMGB1P25-201ENST00000468402 LCHNA4D1U4 455 aa4.67□□□□□ -1.66
HMGB1P25-201ENST00000468402 FAM170BA6NMN3 283 aa4.67□□□□□ -1.66
HMGB1P25-201ENST00000468402 C22orf46C9J442 243 aa4.67□□□□□ -1.66
HMGB1P25-201ENST00000468402 H7BY64 318 aa4.67□□□□□ -1.66
HMGB1P25-201ENST00000468402 ZNF561-AS1K7EIQ3 104 aa4.67□□□□□ -1.66
HMGB1P25-201ENST00000468402 WDHD1O75717 1129 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P25-201ENST00000468402 FUCA1P04066 466 aa4.67□□□□□ -1.66
HMGB1P25-201ENST00000468402 ZBTB48P10074 688 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P25-201ENST00000468402 SRFP11831 508 aa4.67□□□□□ -1.66
HMGB1P25-201ENST00000468402 TAL1P17542 331 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P25-201ENST00000468402 FPR2P25090 351 aa4.67□□□□□ -1.66
HMGB1P25-201ENST00000468402 CD40P25942 277 aa4.67□□□□□ -1.66
HMGB1P25-201ENST00000468402 PTX3P26022 381 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P25-201ENST00000468402 ADMP35318 185 aa4.67□□□□□ -1.66
HMGB1P25-201ENST00000468402 GPR3P46089 330 aa4.67□□□□□ -1.66
HMGB1P25-201ENST00000468402 SMAD3P84022 425 aaKnown RBP4.67□□□□□ -1.66
HMGB1P25-201ENST00000468402 FZD5Q13467 585 aa4.67□□□□□ -1.66
HMGB1P25-201ENST00000468402 SMAD2Q15796 467 aaKnown RBP4.67□□□□□ -1.66
HMGB1P25-201ENST00000468402 GRAMD1BQ3KR37 738 aa4.67□□□□□ -1.66
HMGB1P25-201ENST00000468402 RRP12Q5JTH9 1297 aaKnown RBP4.67□□□□□ -1.66
HMGB1P25-201ENST00000468402 GPR158Q5T848 1215 aa4.67□□□□□ -1.66
HMGB1P25-201ENST00000468402 ANGEL2Q5VTE6 544 aaKnown RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms