RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 HAUS3Q68CZ6 603 aa13.32□□□□□ -0.28
RNF13-208ENST00000467996 ZNF746Q6NUN9 644 aaPredicted RBP13.32□□□□□ -0.28
RNF13-208ENST00000467996 METTL7BQ6UX53 244 aa13.32□□□□□ -0.28
RNF13-208ENST00000467996 CCDC73Q6ZRK6 1079 aa13.32□□□□□ -0.28
RNF13-208ENST00000467996 CYFIP1Q7L576 1253 aa13.32□□□□□ -0.28
RNF13-208ENST00000467996 MIER3Q7Z3K6 550 aa13.32□□□□□ -0.28
RNF13-208ENST00000467996 CABP7Q86V35 215 aa13.32□□□□□ -0.28
RNF13-208ENST00000467996 TRPV1Q8NER1 839 aa13.32□□□□□ -0.28
RNF13-208ENST00000467996 PXYLP1Q8TE99 480 aa13.32□□□□□ -0.28
RNF13-208ENST00000467996 SNX29Q8TEQ0 813 aa13.32□□□□□ -0.28
RNF13-208ENST00000467996 CCSER1Q9C0I3 900 aa13.32□□□□□ -0.28
RNF13-208ENST00000467996 TELO2Q9Y4R8 837 aa13.32□□□□□ -0.28
RNF13-208ENST00000467996 PTCH2Q9Y6C5 1203 aa13.32□□□□□ -0.28
RNF13-208ENST00000467996 CEP350Q5VT06 3117 aa13.32□□□□□ -0.28
RNF13-208ENST00000467996 A0A087X0B3 334 aa13.31□□□□□ -0.28
RNF13-208ENST00000467996 WDR64B1ANS9 1081 aa13.31□□□□□ -0.28
RNF13-208ENST00000467996 MBD3O95983 291 aa13.31□□□□□ -0.28
RNF13-208ENST00000467996 SMPD1P17405 629 aa13.31□□□□□ -0.28
RNF13-208ENST00000467996 PTGS1P23219 599 aa13.31□□□□□ -0.28
RNF13-208ENST00000467996 SFNP31947 248 aa13.31□□□□□ -0.28
RNF13-208ENST00000467996 UBA7P41226 1012 aa13.31□□□□□ -0.28
RNF13-208ENST00000467996 JAK3P52333 1124 aa13.31□□□□□ -0.28
RNF13-208ENST00000467996 ACTR2P61160 394 aa13.31□□□□□ -0.28
RNF13-208ENST00000467996 SP4Q02446 784 aa13.31□□□□□ -0.28
RNF13-208ENST00000467996 ARHGAP1Q07960 439 aa13.31□□□□□ -0.28
RNF13-208ENST00000467996 CACNB2Q08289 660 aaPredicted RBP13.31□□□□□ -0.28
RNF13-208ENST00000467996 KARSQ15046 597 aaKnown RBP13.31□□□□□ -0.28
RNF13-208ENST00000467996 DUSP28Q4G0W2 176 aa13.31□□□□□ -0.28
RNF13-208ENST00000467996 KRT79Q5XKE5 535 aa13.31□□□□□ -0.28
RNF13-208ENST00000467996 IQSEC1Q6DN90 963 aa13.31□□□□□ -0.28
RNF13-208ENST00000467996 DHX37Q8IY37 1157 aaKnown RBP13.31□□□□□ -0.28
RNF13-208ENST00000467996 SMAP1Q8IYB5 467 aaPredicted RBP13.31□□□□□ -0.28
RNF13-208ENST00000467996 SLAIN1Q8ND83 568 aa13.31□□□□□ -0.28
RNF13-208ENST00000467996 ENGASEQ8NFI3 743 aa13.31□□□□□ -0.28
RNF13-208ENST00000467996 ERMNQ8TAM6 284 aa13.31□□□□□ -0.28
RNF13-208ENST00000467996 EIF2AK1Q9BQI3 630 aaKnown RBP13.31□□□□□ -0.28
RNF13-208ENST00000467996 MLXIPQ9HAP2 919 aa13.31□□□□□ -0.28
RNF13-208ENST00000467996 KCNH3Q9ULD8 1083 aa13.31□□□□□ -0.28
RNF13-208ENST00000467996 STK24Q9Y6E0 443 aa13.31□□□□□ -0.28
RNF13-208ENST00000467996 KDM3AQ9Y4C1 1321 aa13.31□□□□□ -0.28
RNF13-208ENST00000467996 NKRFO15226 690 aaKnown RBP eCLIP13.3□□□□□ -0.28
RNF13-208ENST00000467996 MED24O75448 989 aa13.3□□□□□ -0.28
RNF13-208ENST00000467996 NR1I2O75469 434 aa13.3□□□□□ -0.28
RNF13-208ENST00000467996 GH1P01241 217 aa13.3□□□□□ -0.28
RNF13-208ENST00000467996 PRKAR2AP13861 404 aaKnown RBP13.3□□□□□ -0.28
RNF13-208ENST00000467996 AKR1A1P14550 325 aa13.3□□□□□ -0.28
RNF13-208ENST00000467996 CCT6AP40227 531 aaKnown RBP13.3□□□□□ -0.28
RNF13-208ENST00000467996 SYKP43405 635 aa13.3□□□□□ -0.28
RNF13-208ENST00000467996 CYP4A11Q02928 519 aa13.3□□□□□ -0.28
RNF13-208ENST00000467996 TNFAIP2Q03169 654 aa13.3□□□□□ -0.28
RNF13-208ENST00000467996 FAM160A1Q05DH4 1040 aa13.3□□□□□ -0.28
RNF13-208ENST00000467996 GRB10Q13322 594 aa13.3□□□□□ -0.28
RNF13-208ENST00000467996 EPHA7Q15375 998 aa13.3□□□□□ -0.28
RNF13-208ENST00000467996 HYIQ5T013 277 aa13.3□□□□□ -0.28
RNF13-208ENST00000467996 FMR1NBQ8N0W7 255 aaPredicted RBP13.3□□□□□ -0.28
RNF13-208ENST00000467996 PDILTQ8N807 584 aa13.3□□□□□ -0.28
RNF13-208ENST00000467996 RDM1Q8NG50 284 aa13.3□□□□□ -0.28
RNF13-208ENST00000467996 RASSF8Q8NHQ8 419 aa13.3□□□□□ -0.28
RNF13-208ENST00000467996 NEK9Q8TD19 979 aa13.3□□□□□ -0.28
RNF13-208ENST00000467996 LENG1Q96BZ8 264 aaPredicted RBP13.3□□□□□ -0.28
RNF13-208ENST00000467996 DYDC2Q96IM9 177 aa13.3□□□□□ -0.28
RNF13-208ENST00000467996 PNMA5Q96PV4 448 aa13.3□□□□□ -0.28
RNF13-208ENST00000467996 DISC1Q9NRI5 854 aa13.3□□□□□ -0.28
RNF13-208ENST00000467996 CCDC39Q9UFE4 941 aa13.3□□□□□ -0.28
RNF13-208ENST00000467996 FAM184BQ9ULE4 1060 aa13.3□□□□□ -0.28
RNF13-208ENST00000467996 GNEQ9Y223 722 aaKnown RBP13.3□□□□□ -0.28
RNF13-208ENST00000467996 PTPN22Q9Y2R2 807 aa13.3□□□□□ -0.28
RNF13-208ENST00000467996 SAMM50Q9Y512 469 aa13.3□□□□□ -0.28
RNF13-208ENST00000467996 POTEB3A0JP26 581 aa13.29□□□□□ -0.28
RNF13-208ENST00000467996 POLR2DO15514 142 aaKnown RBP13.29□□□□□ -0.28
RNF13-208ENST00000467996 SLC26A4O43511 780 aa13.29□□□□□ -0.28
RNF13-208ENST00000467996 INHAP05111 366 aa13.29□□□□□ -0.28
RNF13-208ENST00000467996 SUPT20HL2P0C7V6 817 aa13.29□□□□□ -0.28
RNF13-208ENST00000467996 SPATA31C1P0DKV0 1188 aa13.29□□□□□ -0.28
RNF13-208ENST00000467996 PLCG1P19174 1290 aa13.29□□□□□ -0.28
RNF13-208ENST00000467996 RPA1P27694 616 aa13.29□□□□□ -0.28
RNF13-208ENST00000467996 CCND3P30281 292 aaPredicted RBP13.29□□□□□ -0.28
RNF13-208ENST00000467996 GRK4P32298 578 aa13.29□□□□□ -0.28
RNF13-208ENST00000467996 CTCFP49711 727 aaPredicted RBP13.29□□□□□ -0.28
RNF13-208ENST00000467996 LBX1P52954 281 aa13.29□□□□□ -0.28
RNF13-208ENST00000467996 SNW1Q13573 536 aaKnown RBP13.29□□□□□ -0.28
RNF13-208ENST00000467996 ZRSR1Q15695 479 aaKnown RBP13.29□□□□□ -0.28
RNF13-208ENST00000467996 ECM1Q16610 540 aa13.29□□□□□ -0.28
RNF13-208ENST00000467996 HSDL1Q3SXM5 330 aa13.29□□□□□ -0.28
RNF13-208ENST00000467996 TMEM119Q4V9L6 283 aa13.29□□□□□ -0.28
RNF13-208ENST00000467996 MAP3K21Q5TCX8 1036 aa13.29□□□□□ -0.28
RNF13-208ENST00000467996 POTEBQ6S5H4 581 aa13.29□□□□□ -0.28
RNF13-208ENST00000467996 CATSPER3Q86XQ3 398 aa13.29□□□□□ -0.28
RNF13-208ENST00000467996 OR6J1Q8NGC5 347 aa13.29□□□□□ -0.28
RNF13-208ENST00000467996 EMID1Q96A84 441 aaPredicted RBP13.29□□□□□ -0.28
RNF13-208ENST00000467996 DHX58Q96C10 678 aa13.29□□□□□ -0.28
RNF13-208ENST00000467996 CALML4Q96GE6 196 aa13.29□□□□□ -0.28
RNF13-208ENST00000467996 SPATA33Q96N06 139 aa13.29□□□□□ -0.28
RNF13-208ENST00000467996 PLIN2Q99541 437 aa13.29□□□□□ -0.28
RNF13-208ENST00000467996 GPR20Q99678 358 aa13.29□□□□□ -0.28
RNF13-208ENST00000467996 POLR3CQ9BUI4 534 aaPredicted RBP13.29□□□□□ -0.28
RNF13-208ENST00000467996 TUFT1Q9NNX1 390 aa13.29□□□□□ -0.28
RNF13-208ENST00000467996 DACT1Q9NYF0 836 aa13.29□□□□□ -0.28
RNF13-208ENST00000467996 RGL1Q9NZL6 768 aa13.29□□□□□ -0.28
RNF13-208ENST00000467996 PCDHA10Q9Y5I2 948 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms