RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-208ENST00000467838 HMGB1P1B2RPK0 211 aaPredicted RBP15.95■□□□□ 0.14
SEC16A-208ENST00000467838 FTCDO95954 541 aa15.95■□□□□ 0.14
SEC16A-208ENST00000467838 PLCG2P16885 1265 aa15.95■□□□□ 0.14
SEC16A-208ENST00000467838 LSP1P33241 339 aa15.95■□□□□ 0.14
SEC16A-208ENST00000467838 POLR2FP61218 127 aaKnown RBP15.95■□□□□ 0.14
SEC16A-208ENST00000467838 TNNC1P63316 161 aa15.95■□□□□ 0.14
SEC16A-208ENST00000467838 ZNF804AQ7Z570 1209 aa15.95■□□□□ 0.14
SEC16A-208ENST00000467838 CNPY4Q8N129 248 aa15.95■□□□□ 0.14
SEC16A-208ENST00000467838 SH2D3CQ8N5H7 860 aa15.95■□□□□ 0.14
SEC16A-208ENST00000467838 HAS1Q92839 578 aa15.95■□□□□ 0.14
SEC16A-208ENST00000467838 ARHGEF1Q92888 912 aaKnown RBP15.95■□□□□ 0.14
SEC16A-208ENST00000467838 ATP6V1G3Q96LB4 118 aa15.95■□□□□ 0.14
SEC16A-208ENST00000467838 EPN3Q9H201 632 aa15.95■□□□□ 0.14
SEC16A-208ENST00000467838 KCTD10Q9H3F6 313 aa15.95■□□□□ 0.14
SEC16A-208ENST00000467838 SRP68Q9UHB9 627 aaKnown RBP15.95■□□□□ 0.14
SEC16A-208ENST00000467838 GGA2Q9UJY4 613 aa15.95■□□□□ 0.14
SEC16A-208ENST00000467838 MYH4Q9Y623 1939 aa15.95■□□□□ 0.14
SEC16A-208ENST00000467838 A0A087X0T9 212 aa15.95■□□□□ 0.14
SEC16A-208ENST00000467838 FRMD3A2A2Y4 597 aa15.95■□□□□ 0.14
SEC16A-208ENST00000467838 TRAF5O00463 557 aa15.95■□□□□ 0.14
SEC16A-208ENST00000467838 NDUFAB1O14561 156 aa15.95■□□□□ 0.14
SEC16A-208ENST00000467838 ZPR1O75312 459 aa15.95■□□□□ 0.14
SEC16A-208ENST00000467838 FAM228BP0C875 321 aa15.95■□□□□ 0.14
SEC16A-208ENST00000467838 ZBTB48P10074 688 aaPredicted RBP15.95■□□□□ 0.14
SEC16A-208ENST00000467838 GCFC2P16383 781 aaKnown RBP15.95■□□□□ 0.14
SEC16A-208ENST00000467838 NR1D1P20393 614 aa15.95■□□□□ 0.14
SEC16A-208ENST00000467838 EDRF1Q3B7T1 1238 aa15.95■□□□□ 0.14
SEC16A-208ENST00000467838 SWT1Q5T5J6 900 aaKnown RBP15.95■□□□□ 0.14
SEC16A-208ENST00000467838 DPY19L2P1Q6NXN4 242 aa15.95■□□□□ 0.14
SEC16A-208ENST00000467838 PPP4R3CPQ6ZMV5 832 aa15.95■□□□□ 0.14
SEC16A-208ENST00000467838 TBC1D5Q92609 795 aa15.95■□□□□ 0.14
SEC16A-208ENST00000467838 FAM163AQ96GL9 167 aaPredicted RBP15.95■□□□□ 0.14
SEC16A-208ENST00000467838 RNPC3Q96LT9 517 aaKnown RBP15.95■□□□□ 0.14
SEC16A-208ENST00000467838 KRT12Q99456 494 aa15.95■□□□□ 0.14
SEC16A-208ENST00000467838 PLCB1Q9NQ66 1216 aa15.95■□□□□ 0.14
SEC16A-208ENST00000467838 PANK4Q9NVE7 773 aa15.95■□□□□ 0.14
SEC16A-208ENST00000467838 GREB1LQ9C091 1923 aaPredicted RBP15.94■□□□□ 0.14
SEC16A-208ENST00000467838 GAKO14976 1311 aa15.94■□□□□ 0.14
SEC16A-208ENST00000467838 ESYT3A0FGR9 886 aa15.94■□□□□ 0.14
SEC16A-208ENST00000467838 FSBPO95073 299 aa15.94■□□□□ 0.14
SEC16A-208ENST00000467838 ANXA13P27216 316 aa15.94■□□□□ 0.14
SEC16A-208ENST00000467838 ECHS1P30084 290 aa15.94■□□□□ 0.14
SEC16A-208ENST00000467838 INPP5BP32019 993 aa15.94■□□□□ 0.14
SEC16A-208ENST00000467838 LIG3P49916 1009 aa15.94■□□□□ 0.14
SEC16A-208ENST00000467838 RHBDL3P58872 404 aa15.94■□□□□ 0.14
SEC16A-208ENST00000467838 TRAPPC3LQ5T215 181 aa15.94■□□□□ 0.14
SEC16A-208ENST00000467838 TPTE2Q6XPS3 522 aa15.94■□□□□ 0.14
SEC16A-208ENST00000467838 GPIHBP1Q8IV16 184 aa15.94■□□□□ 0.14
SEC16A-208ENST00000467838 TEX11Q8IYF3 940 aa15.94■□□□□ 0.14
SEC16A-208ENST00000467838 CALR3Q96L12 384 aaKnown RBP15.94■□□□□ 0.14
SEC16A-208ENST00000467838 NT5C3AQ9H0P0 336 aa15.94■□□□□ 0.14
SEC16A-208ENST00000467838 ISCUQ9H1K1 167 aa15.94■□□□□ 0.14
SEC16A-208ENST00000467838 NENFQ9UMX5 172 aa15.94■□□□□ 0.14
SEC16A-208ENST00000467838 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.94■□□□□ 0.14
SEC16A-208ENST00000467838 IGKV6D-41A0A0C4DH26 115 aa15.93■□□□□ 0.14
SEC16A-208ENST00000467838 RAD51CO43502 376 aa15.93■□□□□ 0.14
SEC16A-208ENST00000467838 PPP1R37O75864 691 aa15.93■□□□□ 0.14
SEC16A-208ENST00000467838 APBA3O96018 575 aa15.93■□□□□ 0.14
SEC16A-208ENST00000467838 USP11P51784 963 aa15.93■□□□□ 0.14
SEC16A-208ENST00000467838 GTF2A1P52655 376 aaPredicted RBP15.93■□□□□ 0.14
SEC16A-208ENST00000467838 NAP1L1P55209 391 aaKnown RBP15.93■□□□□ 0.14
SEC16A-208ENST00000467838 GRAPQ13588 217 aa15.93■□□□□ 0.14
SEC16A-208ENST00000467838 CUL1Q13616 776 aa15.93■□□□□ 0.14
SEC16A-208ENST00000467838 ASIC2Q16515 512 aa15.93■□□□□ 0.14
SEC16A-208ENST00000467838 PTGISQ16647 500 aa15.93■□□□□ 0.14
SEC16A-208ENST00000467838 PRPF38AQ8NAV1 312 aaKnown RBP15.93■□□□□ 0.14
SEC16A-208ENST00000467838 GRAPLQ8TC17 118 aaPredicted RBP15.93■□□□□ 0.14
SEC16A-208ENST00000467838 FGFBP2Q9BYJ0 223 aa15.93■□□□□ 0.14
SEC16A-208ENST00000467838 UBA5Q9GZZ9 404 aa15.93■□□□□ 0.14
SEC16A-208ENST00000467838 TAF1DQ9H5J8 278 aaPredicted RBP15.93■□□□□ 0.14
SEC16A-208ENST00000467838 VAT1LQ9HCJ6 419 aa15.93■□□□□ 0.14
SEC16A-208ENST00000467838 RFC4P35249 363 aa15.93■□□□□ 0.14
SEC16A-208ENST00000467838 FNTAP49354 379 aa15.93■□□□□ 0.14
SEC16A-208ENST00000467838 KLHL30Q0D2K2 578 aa15.93■□□□□ 0.14
SEC16A-208ENST00000467838 ITGB3BPQ13352 177 aaPredicted RBP15.93■□□□□ 0.14
SEC16A-208ENST00000467838 RAPGEF1Q13905 1077 aa15.93■□□□□ 0.14
SEC16A-208ENST00000467838 KIAA0753Q2KHM9 967 aa15.93■□□□□ 0.14
SEC16A-208ENST00000467838 NAA35Q5VZE5 725 aa15.93■□□□□ 0.14
SEC16A-208ENST00000467838 TTC19Q6DKK2 380 aaPredicted RBP15.93■□□□□ 0.14
SEC16A-208ENST00000467838 CCDC65Q8IXS2 484 aa15.93■□□□□ 0.14
SEC16A-208ENST00000467838 LRRC57Q8N9N7 239 aa15.93■□□□□ 0.14
SEC16A-208ENST00000467838 ACTRT1Q8TDG2 376 aa15.93■□□□□ 0.14
SEC16A-208ENST00000467838 SCFD2Q8WU76 684 aa15.93■□□□□ 0.14
SEC16A-208ENST00000467838 COA7Q96BR5 231 aa15.93■□□□□ 0.14
SEC16A-208ENST00000467838 PBKQ96KB5 322 aa15.93■□□□□ 0.14
SEC16A-208ENST00000467838 CEP89Q96ST8 783 aa15.93■□□□□ 0.14
SEC16A-208ENST00000467838 PACSIN1Q9BY11 444 aa15.93■□□□□ 0.14
SEC16A-208ENST00000467838 MTMR4Q9NYA4 1195 aa15.93■□□□□ 0.14
SEC16A-208ENST00000467838 DDX25Q9UHL0 483 aaKnown RBP15.93■□□□□ 0.14
SEC16A-208ENST00000467838 UBR3Q6ZT12 1888 aa15.92■□□□□ 0.14
SEC16A-208ENST00000467838 PLSCR1O15162 318 aa15.92■□□□□ 0.14
SEC16A-208ENST00000467838 MEFVO15553 781 aaPredicted RBP15.92■□□□□ 0.14
SEC16A-208ENST00000467838 KCTD16Q68DU8 428 aa15.92■□□□□ 0.14
SEC16A-208ENST00000467838 MCTP2Q6DN12 878 aa15.92■□□□□ 0.14
SEC16A-208ENST00000467838 KCNV1Q6PIU1 500 aa15.92■□□□□ 0.14
SEC16A-208ENST00000467838 SCFD1Q8WVM8 642 aa15.92■□□□□ 0.14
SEC16A-208ENST00000467838 IFT81Q8WYA0 676 aa15.92■□□□□ 0.14
SEC16A-208ENST00000467838 NAP1L4Q99733 375 aaKnown RBP15.92■□□□□ 0.14
SEC16A-208ENST00000467838 TMBIM4Q9HC24 238 aa15.92■□□□□ 0.14
SEC16A-208ENST00000467838 BMP2KQ9NSY1 1161 aaPredicted RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms