RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 GOLGA8BA8MQT2 603 aa11.87□□□□□ -0.51
SSR3-205ENST00000467789 EFCAB14O75071 495 aa11.87□□□□□ -0.51
SSR3-205ENST00000467789 CAND2O75155 1236 aa11.87□□□□□ -0.51
SSR3-205ENST00000467789 CKBP12277 381 aa11.87□□□□□ -0.51
SSR3-205ENST00000467789 HOXC8P31273 242 aa11.87□□□□□ -0.51
SSR3-205ENST00000467789 NAPAP54920 295 aa11.87□□□□□ -0.51
SSR3-205ENST00000467789 FUT2Q10981 343 aa11.87□□□□□ -0.51
SSR3-205ENST00000467789 SEMA3FQ13275 785 aa11.87□□□□□ -0.51
SSR3-205ENST00000467789 AP3B2Q13367 1082 aa11.87□□□□□ -0.51
SSR3-205ENST00000467789 ERICH6BQ5W0A0 696 aa11.87□□□□□ -0.51
SSR3-205ENST00000467789 MCTP2Q6DN12 878 aa11.87□□□□□ -0.51
SSR3-205ENST00000467789 RAB11FIP4Q86YS3 637 aa11.87□□□□□ -0.51
SSR3-205ENST00000467789 MAFAQ8NHW3 353 aaPredicted RBP11.87□□□□□ -0.51
SSR3-205ENST00000467789 MYLIPQ8WY64 445 aa11.87□□□□□ -0.51
SSR3-205ENST00000467789 GAS2L1Q99501 681 aaPredicted RBP11.87□□□□□ -0.51
SSR3-205ENST00000467789 GPR20Q99678 358 aa11.87□□□□□ -0.51
SSR3-205ENST00000467789 AGXT2Q9BYV1 514 aa11.87□□□□□ -0.51
SSR3-205ENST00000467789 FTOQ9C0B1 505 aaKnown RBP eCLIP11.87□□□□□ -0.51
SSR3-205ENST00000467789 RIC8AQ9NPQ8 531 aa11.87□□□□□ -0.51
SSR3-205ENST00000467789 BARHL2Q9NY43 387 aa11.87□□□□□ -0.51
SSR3-205ENST00000467789 PCDHA6Q9UN73 950 aa11.87□□□□□ -0.51
SSR3-205ENST00000467789 PCDHA8Q9Y5H6 950 aa11.87□□□□□ -0.51
SSR3-205ENST00000467789 UBIAD1Q9Y5Z9 338 aa11.87□□□□□ -0.51
SSR3-205ENST00000467789 NID2Q14112 1375 aa11.87□□□□□ -0.51
SSR3-205ENST00000467789 CDH23Q9H251 3354 aa11.87□□□□□ -0.51
SSR3-205ENST00000467789 EMSYQ7Z589 1322 aa11.86□□□□□ -0.51
SSR3-205ENST00000467789 hCG_1642624A0A1W2PR95 340 aa11.86□□□□□ -0.51
SSR3-205ENST00000467789 C17orf102A2RUQ5 167 aa11.86□□□□□ -0.51
SSR3-205ENST00000467789 GRXCR1A8MXD5 290 aa11.86□□□□□ -0.51
SSR3-205ENST00000467789 KIF28PB7ZC32 967 aa11.86□□□□□ -0.51
SSR3-205ENST00000467789 CXCL10P02778 98 aa11.86□□□□□ -0.51
SSR3-205ENST00000467789 PBX2P40425 430 aa11.86□□□□□ -0.51
SSR3-205ENST00000467789 METAP2P50579 478 aaKnown RBP eCLIP11.86□□□□□ -0.51
SSR3-205ENST00000467789 ADCY7P51828 1080 aa11.86□□□□□ -0.51
SSR3-205ENST00000467789 MTMR1Q13613 665 aa11.86□□□□□ -0.51
SSR3-205ENST00000467789 GRIN2CQ14957 1233 aa11.86□□□□□ -0.51
SSR3-205ENST00000467789 WWC2Q6AWC2 1192 aa11.86□□□□□ -0.51
SSR3-205ENST00000467789 CNKSR3Q6P9H4 555 aa11.86□□□□□ -0.51
SSR3-205ENST00000467789 SERINC5Q86VE9 423 aa11.86□□□□□ -0.51
SSR3-205ENST00000467789 CCDC12Q8WUD4 166 aaPredicted RBP11.86□□□□□ -0.51
SSR3-205ENST00000467789 PPP1R13LQ8WUF5 828 aa11.86□□□□□ -0.51
SSR3-205ENST00000467789 DHX38Q92620 1227 aaKnown RBP11.86□□□□□ -0.51
SSR3-205ENST00000467789 TCEANC2Q96MN5 208 aa11.86□□□□□ -0.51
SSR3-205ENST00000467789 JAKMIP1Q96N16 626 aaKnown RBP11.86□□□□□ -0.51
SSR3-205ENST00000467789 SNX14Q9Y5W7 946 aa11.86□□□□□ -0.51
SSR3-205ENST00000467789 V9GY48 417 aaPredicted RBP11.86□□□□□ -0.51
SSR3-205ENST00000467789 DOCK5Q9H7D0 1870 aa11.86□□□□□ -0.51
SSR3-205ENST00000467789 TET1Q8NFU7 2136 aa11.86□□□□□ -0.51
SSR3-205ENST00000467789 KAT6AQ92794 2004 aa11.86□□□□□ -0.51
SSR3-205ENST00000467789 ABHD14A-ACY1A0A1B0GW23 586 aa11.85□□□□□ -0.51
SSR3-205ENST00000467789 SORBS3O60504 671 aa11.85□□□□□ -0.51
SSR3-205ENST00000467789 SMIM10L2AP0DMW4 78 aa11.85□□□□□ -0.51
SSR3-205ENST00000467789 SMIM10L2BP0DMW5 78 aa11.85□□□□□ -0.51
SSR3-205ENST00000467789 KCNA2P16389 499 aa11.85□□□□□ -0.51
SSR3-205ENST00000467789 ITGB5P18084 799 aa11.85□□□□□ -0.51
SSR3-205ENST00000467789 RPS6KB1P23443 525 aa11.85□□□□□ -0.51
SSR3-205ENST00000467789 KCNJ6P48051 423 aa11.85□□□□□ -0.51
SSR3-205ENST00000467789 UBE2SQ16763 222 aa11.85□□□□□ -0.51
SSR3-205ENST00000467789 TRIM71Q2Q1W2 868 aaKnown RBP11.85□□□□□ -0.51
SSR3-205ENST00000467789 Q6ZUG5 572 aa11.85□□□□□ -0.51
SSR3-205ENST00000467789 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.85□□□□□ -0.51
SSR3-205ENST00000467789 SEPT1Q8WYJ6 367 aa11.85□□□□□ -0.51
SSR3-205ENST00000467789 TNPO1Q92973 898 aaKnown RBP11.85□□□□□ -0.51
SSR3-205ENST00000467789 BRF1Q92994 677 aa11.85□□□□□ -0.51
SSR3-205ENST00000467789 ATP6V0A1Q93050 837 aa11.85□□□□□ -0.51
SSR3-205ENST00000467789 RNPEPQ9H4A4 650 aa11.85□□□□□ -0.51
SSR3-205ENST00000467789 JADE2Q9NQC1 790 aa11.85□□□□□ -0.51
SSR3-205ENST00000467789 FAM217BQ9NTX9 383 aaPredicted RBP11.85□□□□□ -0.51
SSR3-205ENST00000467789 MYO9BQ13459 2157 aa11.85□□□□□ -0.51
SSR3-205ENST00000467789 NRCAMQ92823 1304 aa11.85□□□□□ -0.51
SSR3-205ENST00000467789 UNC80Q8N2C7 3258 aa11.84□□□□□ -0.51
SSR3-205ENST00000467789 ESYT2A0FGR8 921 aa11.84□□□□□ -0.51
SSR3-205ENST00000467789 SMCO2A6NFE2 343 aa11.84□□□□□ -0.51
SSR3-205ENST00000467789 STXBP3O00186 592 aa11.84□□□□□ -0.51
SSR3-205ENST00000467789 RPLP2P05387 115 aaKnown RBP11.84□□□□□ -0.51
SSR3-205ENST00000467789 SCG2P13521 617 aa11.84□□□□□ -0.51
SSR3-205ENST00000467789 CDC27P30260 824 aa11.84□□□□□ -0.51
SSR3-205ENST00000467789 TCF7P36402 384 aaPredicted RBP11.84□□□□□ -0.51
SSR3-205ENST00000467789 EVCP57679 992 aa11.84□□□□□ -0.51
SSR3-205ENST00000467789 IKBKEQ14164 716 aa11.84□□□□□ -0.51
SSR3-205ENST00000467789 PFKFB3Q16875 520 aaPredicted RBP11.84□□□□□ -0.51
SSR3-205ENST00000467789 PPP2R2DQ66LE6 453 aa11.84□□□□□ -0.51
SSR3-205ENST00000467789 ZNF710Q8N1W2 664 aa11.84□□□□□ -0.51
SSR3-205ENST00000467789 PTCD2Q8WV60 388 aaKnown RBP11.84□□□□□ -0.51
SSR3-205ENST00000467789 MXRA8Q9BRK3 442 aa11.84□□□□□ -0.51
SSR3-205ENST00000467789 NKX2-4Q9H2Z4 354 aa11.84□□□□□ -0.51
SSR3-205ENST00000467789 BCAS3Q9H6U6 928 aa11.84□□□□□ -0.51
SSR3-205ENST00000467789 ERAP1Q9NZ08 941 aa11.84□□□□□ -0.51
SSR3-205ENST00000467789 NAP1L2Q9ULW6 460 aaPredicted RBP11.84□□□□□ -0.51
SSR3-205ENST00000467789 ARIH1Q9Y4X5 557 aaPredicted RBP11.84□□□□□ -0.51
SSR3-205ENST00000467789 NFASCO94856 1347 aa11.84□□□□□ -0.51
SSR3-205ENST00000467789 TRANK1O15050 2925 aa11.83□□□□□ -0.51
SSR3-205ENST00000467789 RSPH10B2B2RC85 870 aa11.83□□□□□ -0.52
SSR3-205ENST00000467789 PRPF3O43395 683 aaKnown RBP11.83□□□□□ -0.52
SSR3-205ENST00000467789 NBNO60934 754 aa11.83□□□□□ -0.52
SSR3-205ENST00000467789 ATP9AO75110 1047 aa11.83□□□□□ -0.52
SSR3-205ENST00000467789 RSPH10BP0C881 870 aa11.83□□□□□ -0.52
SSR3-205ENST00000467789 GNA11P29992 359 aa11.83□□□□□ -0.52
SSR3-205ENST00000467789 ADD1P35611 737 aaKnown RBP11.83□□□□□ -0.52
SSR3-205ENST00000467789 SREBF1P36956 1147 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms