RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 SPATA31C2B4DYI2 1134 aa16.08■□□□□ 0.16
CCHCR1-211ENST00000467553 H3BRB1 525 aa16.08■□□□□ 0.16
CCHCR1-211ENST00000467553 TNFRSF10AO00220 468 aa16.08■□□□□ 0.16
CCHCR1-211ENST00000467553 CPLX1O14810 134 aa16.08■□□□□ 0.16
CCHCR1-211ENST00000467553 FIBPO43427 364 aa16.08■□□□□ 0.16
CCHCR1-211ENST00000467553 ZNF286BP0CG31 522 aa16.08■□□□□ 0.16
CCHCR1-211ENST00000467553 IFNAR1P17181 557 aa16.08■□□□□ 0.16
CCHCR1-211ENST00000467553 HOXC8P31273 242 aa16.08■□□□□ 0.16
CCHCR1-211ENST00000467553 SP2Q02086 613 aa16.08■□□□□ 0.16
CCHCR1-211ENST00000467553 GPNMBQ14956 572 aa16.08■□□□□ 0.16
CCHCR1-211ENST00000467553 PKN1Q16512 942 aa16.08■□□□□ 0.16
CCHCR1-211ENST00000467553 TRIM71Q2Q1W2 868 aaKnown RBP16.08■□□□□ 0.16
CCHCR1-211ENST00000467553 PCNX4Q63HM2 1172 aa16.08■□□□□ 0.16
CCHCR1-211ENST00000467553 PPP1R13LQ8WUF5 828 aa16.08■□□□□ 0.16
CCHCR1-211ENST00000467553 CDHR1Q96JP9 859 aa16.08■□□□□ 0.16
CCHCR1-211ENST00000467553 RAD9AQ99638 391 aa16.08■□□□□ 0.16
CCHCR1-211ENST00000467553 C16orf70Q9BSU1 422 aa16.08■□□□□ 0.16
CCHCR1-211ENST00000467553 TUT1Q9H6E5 874 aaKnown RBP16.08■□□□□ 0.16
CCHCR1-211ENST00000467553 PRDM6Q9NQX0 595 aa16.08■□□□□ 0.16
CCHCR1-211ENST00000467553 NID2Q14112 1375 aa16.08■□□□□ 0.16
CCHCR1-211ENST00000467553 XIRP2A4UGR9 3374 aa16.08■□□□□ 0.16
CCHCR1-211ENST00000467553 NCOR1O75376 2440 aa16.08■□□□□ 0.16
CCHCR1-211ENST00000467553 C17orf102A2RUQ5 167 aa16.07■□□□□ 0.16
CCHCR1-211ENST00000467553 NOP56O00567 594 aaKnown RBP16.07■□□□□ 0.16
CCHCR1-211ENST00000467553 NBNO60934 754 aa16.07■□□□□ 0.16
CCHCR1-211ENST00000467553 TAP1Q03518 808 aa16.07■□□□□ 0.16
CCHCR1-211ENST00000467553 SSRP1Q08945 709 aaKnown RBP16.07■□□□□ 0.16
CCHCR1-211ENST00000467553 CCDC85BQ15834 202 aaPredicted RBP16.07■□□□□ 0.16
CCHCR1-211ENST00000467553 C8orf34Q49A92 452 aa16.07■□□□□ 0.16
CCHCR1-211ENST00000467553 PPP1R18Q6NYC8 613 aa16.07■□□□□ 0.16
CCHCR1-211ENST00000467553 NLRX1Q86UT6 975 aa16.07■□□□□ 0.16
CCHCR1-211ENST00000467553 SERINC5Q86VE9 423 aa16.07■□□□□ 0.16
CCHCR1-211ENST00000467553 PGBD1Q96JS3 809 aa16.07■□□□□ 0.16
CCHCR1-211ENST00000467553 ZBED2Q9BTP6 218 aa16.07■□□□□ 0.16
CCHCR1-211ENST00000467553 RNF26Q9BY78 433 aaPredicted RBP16.07■□□□□ 0.16
CCHCR1-211ENST00000467553 EHMT1Q9H9B1 1298 aa16.07■□□□□ 0.16
CCHCR1-211ENST00000467553 TMEM260Q9NX78 707 aa16.07■□□□□ 0.16
CCHCR1-211ENST00000467553 COG5Q9UP83 839 aa16.07■□□□□ 0.16
CCHCR1-211ENST00000467553 MTCH2Q9Y6C9 303 aa16.07■□□□□ 0.16
CCHCR1-211ENST00000467553 RSPH10B2B2RC85 870 aa16.06■□□□□ 0.16
CCHCR1-211ENST00000467553 LGR5O75473 907 aa16.06■□□□□ 0.16
CCHCR1-211ENST00000467553 GJB5O95377 273 aa16.06■□□□□ 0.16
CCHCR1-211ENST00000467553 RSPH10BP0C881 870 aa16.06■□□□□ 0.16
CCHCR1-211ENST00000467553 NEK4P51957 841 aa16.06■□□□□ 0.16
CCHCR1-211ENST00000467553 AK2P54819 239 aa16.06■□□□□ 0.16
CCHCR1-211ENST00000467553 ANKRD1Q15327 319 aa16.06■□□□□ 0.16
CCHCR1-211ENST00000467553 ZNF618Q5T7W0 954 aa16.06■□□□□ 0.16
CCHCR1-211ENST00000467553 JAKMIP3Q5VZ66 844 aa16.06■□□□□ 0.16
CCHCR1-211ENST00000467553 CPLX2Q6PUV4 134 aaKnown RBP16.06■□□□□ 0.16
CCHCR1-211ENST00000467553 TRIM22Q8IYM9 498 aa16.06■□□□□ 0.16
CCHCR1-211ENST00000467553 CCDC12Q8WUD4 166 aaPredicted RBP16.06■□□□□ 0.16
CCHCR1-211ENST00000467553 ATP6V0A1Q93050 837 aa16.06■□□□□ 0.16
CCHCR1-211ENST00000467553 GLT8D2Q9H1C3 349 aa16.06■□□□□ 0.16
CCHCR1-211ENST00000467553 SLKQ9H2G2 1235 aaPredicted RBP16.06■□□□□ 0.16
CCHCR1-211ENST00000467553 BCAS3Q9H6U6 928 aa16.06■□□□□ 0.16
CCHCR1-211ENST00000467553 ZNF215Q9UL58 517 aaPredicted RBP16.06■□□□□ 0.16
CCHCR1-211ENST00000467553 TPCN1Q9ULQ1 816 aa16.06■□□□□ 0.16
CCHCR1-211ENST00000467553 REV3LO60673 3130 aa16.06■□□□□ 0.16
CCHCR1-211ENST00000467553 MAFGO15525 162 aa16.05■□□□□ 0.16
CCHCR1-211ENST00000467553 FOSP01100 380 aaPredicted RBP16.05■□□□□ 0.16
CCHCR1-211ENST00000467553 LGALS2P05162 132 aa16.05■□□□□ 0.16
CCHCR1-211ENST00000467553 TRAF7Q6Q0C0 670 aa16.05■□□□□ 0.16
CCHCR1-211ENST00000467553 ARNTL2Q8WYA1 636 aa16.05■□□□□ 0.16
CCHCR1-211ENST00000467553 C6orf50Q9HD87 102 aa16.05■□□□□ 0.16
CCHCR1-211ENST00000467553 PTPRSQ13332 1948 aa16.05■□□□□ 0.16
CCHCR1-211ENST00000467553 KAT6AQ92794 2004 aa16.04■□□□□ 0.16
CCHCR1-211ENST00000467553 SMIM10L2AP0DMW4 78 aa16.04■□□□□ 0.16
CCHCR1-211ENST00000467553 SMIM10L2BP0DMW5 78 aa16.04■□□□□ 0.16
CCHCR1-211ENST00000467553 THPOP40225 353 aa16.04■□□□□ 0.16
CCHCR1-211ENST00000467553 CYFIP1Q7L576 1253 aa16.04■□□□□ 0.16
CCHCR1-211ENST00000467553 GPRASP2Q96D09 838 aa16.04■□□□□ 0.16
CCHCR1-211ENST00000467553 GPR20Q99678 358 aa16.04■□□□□ 0.16
CCHCR1-211ENST00000467553 ANO3Q9BYT9 981 aa16.04■□□□□ 0.16
CCHCR1-211ENST00000467553 VPS54Q9P1Q0 977 aa16.04■□□□□ 0.16
CCHCR1-211ENST00000467553 INSL6Q9Y581 213 aa16.04■□□□□ 0.16
CCHCR1-211ENST00000467553 PRRC2BQ5JSZ5 2229 aaKnown RBP16.04■□□□□ 0.16
CCHCR1-211ENST00000467553 DOCK5Q9H7D0 1870 aa16.03■□□□□ 0.16
CCHCR1-211ENST00000467553 BDP1A6H8Y1 2624 aa16.03■□□□□ 0.16
CCHCR1-211ENST00000467553 ADAMTS3O15072 1205 aa16.03■□□□□ 0.16
CCHCR1-211ENST00000467553 PFKFB2O60825 505 aa16.03■□□□□ 0.16
CCHCR1-211ENST00000467553 DTNBO60941 627 aa16.03■□□□□ 0.16
CCHCR1-211ENST00000467553 AMHP03971 560 aa16.03■□□□□ 0.16
CCHCR1-211ENST00000467553 RPLP2P05387 115 aaKnown RBP16.03■□□□□ 0.16
CCHCR1-211ENST00000467553 GNA11P29992 359 aa16.03■□□□□ 0.16
CCHCR1-211ENST00000467553 NLRP5P59047 1200 aa16.03■□□□□ 0.16
CCHCR1-211ENST00000467553 ZNF200P98182 395 aaPredicted RBP16.03■□□□□ 0.16
CCHCR1-211ENST00000467553 SCRN1Q12765 414 aa16.03■□□□□ 0.16
CCHCR1-211ENST00000467553 SEMA3FQ13275 785 aa16.03■□□□□ 0.16
CCHCR1-211ENST00000467553 PLEKHG4Q58EX7 1191 aa16.03■□□□□ 0.16
CCHCR1-211ENST00000467553 ADAMTS19Q8TE59 1207 aa16.03■□□□□ 0.16
CCHCR1-211ENST00000467553 APBB2Q92870 758 aa16.03■□□□□ 0.16
CCHCR1-211ENST00000467553 IL17RAQ96F46 866 aa16.03■□□□□ 0.16
CCHCR1-211ENST00000467553 TGS1Q96RS0 853 aaKnown RBP16.03■□□□□ 0.16
CCHCR1-211ENST00000467553 UHRF1Q96T88 793 aaPredicted RBP16.03■□□□□ 0.16
CCHCR1-211ENST00000467553 ZMYND12Q9H0C1 365 aa16.03■□□□□ 0.16
CCHCR1-211ENST00000467553 RNPEPQ9H4A4 650 aa16.03■□□□□ 0.16
CCHCR1-211ENST00000467553 PKD2L1Q9P0L9 805 aa16.03■□□□□ 0.16
CCHCR1-211ENST00000467553 UBIAD1Q9Y5Z9 338 aa16.03■□□□□ 0.16
CCHCR1-211ENST00000467553 NRCAMQ92823 1304 aa16.02■□□□□ 0.16
CCHCR1-211ENST00000467553 ATP9AO75110 1047 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms