RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 NUP43Q8NFH3 380 aa6.72□□□□□ -1.33
LRCH3-212ENST00000466845 BRF1Q92994 677 aa6.72□□□□□ -1.33
LRCH3-212ENST00000466845 KLHL25Q9H0H3 589 aa6.72□□□□□ -1.33
LRCH3-212ENST00000466845 ARNT2Q9HBZ2 717 aa6.72□□□□□ -1.33
LRCH3-212ENST00000466845 CD248Q9HCU0 757 aa6.72□□□□□ -1.33
LRCH3-212ENST00000466845 CNOT6Q9ULM6 557 aaKnown RBP6.72□□□□□ -1.33
LRCH3-212ENST00000466845 ZNF652Q9Y2D9 606 aa6.72□□□□□ -1.33
LRCH3-212ENST00000466845 SHROOM2Q13796 1616 aa6.72□□□□□ -1.33
LRCH3-212ENST00000466845 KRTAP4-8A0A0G2JLE6 195 aa6.71□□□□□ -1.34
LRCH3-212ENST00000466845 GOLGA6L6A8MZA4 724 aa6.71□□□□□ -1.34
LRCH3-212ENST00000466845 KIF3BO15066 747 aa6.71□□□□□ -1.34
LRCH3-212ENST00000466845 NUAK1O60285 661 aa6.71□□□□□ -1.34
LRCH3-212ENST00000466845 SRGNP10124 158 aa6.71□□□□□ -1.34
LRCH3-212ENST00000466845 TRPC1P48995 793 aa6.71□□□□□ -1.34
LRCH3-212ENST00000466845 CCT2P78371 535 aaKnown RBP6.71□□□□□ -1.34
LRCH3-212ENST00000466845 KIAA2012Q0VF49 1180 aa6.71□□□□□ -1.34
LRCH3-212ENST00000466845 NCAPHQ15003 741 aa6.71□□□□□ -1.34
LRCH3-212ENST00000466845 INO80DQ53TQ3 878 aaPredicted RBP6.71□□□□□ -1.34
LRCH3-212ENST00000466845 ARMC3Q5W041 872 aa6.71□□□□□ -1.34
LRCH3-212ENST00000466845 C16orf87Q6PH81 154 aa6.71□□□□□ -1.34
LRCH3-212ENST00000466845 ADAT2Q7Z6V5 191 aaKnown RBP6.71□□□□□ -1.34
LRCH3-212ENST00000466845 ARHGEF39Q8N4T4 335 aa6.71□□□□□ -1.34
LRCH3-212ENST00000466845 TEX19Q8NA77 164 aa6.71□□□□□ -1.34
LRCH3-212ENST00000466845 SIGLEC10Q96LC7 697 aa6.71□□□□□ -1.34
LRCH3-212ENST00000466845 PTCHD1Q96NR3 888 aa6.71□□□□□ -1.34
LRCH3-212ENST00000466845 FCRL3Q96P31 734 aaPredicted RBP6.71□□□□□ -1.34
LRCH3-212ENST00000466845 NOL6Q9H6R4 1146 aaKnown RBP6.71□□□□□ -1.34
LRCH3-212ENST00000466845 KCNK12Q9HB15 430 aa6.71□□□□□ -1.34
LRCH3-212ENST00000466845 GCM1Q9NP62 436 aa6.71□□□□□ -1.34
LRCH3-212ENST00000466845 HDAC9Q9UKV0 1011 aa6.71□□□□□ -1.34
LRCH3-212ENST00000466845 RUSC2Q8N2Y8 1516 aa6.71□□□□□ -1.34
LRCH3-212ENST00000466845 A0A1W2PQJ5 194 aa6.7□□□□□ -1.34
LRCH3-212ENST00000466845 ANKRD34BA5PLL1 514 aa6.7□□□□□ -1.34
LRCH3-212ENST00000466845 CHL1O00533 1208 aa6.7□□□□□ -1.34
LRCH3-212ENST00000466845 N4BP3O15049 544 aa6.7□□□□□ -1.34
LRCH3-212ENST00000466845 NPHP1O15259 732 aa6.7□□□□□ -1.34
LRCH3-212ENST00000466845 RAPGEF3O95398 923 aa6.7□□□□□ -1.34
LRCH3-212ENST00000466845 RPN1P04843 607 aaKnown RBP6.7□□□□□ -1.34
LRCH3-212ENST00000466845 VIPR1P32241 457 aa6.7□□□□□ -1.34
LRCH3-212ENST00000466845 ZBED6P86452 979 aa6.7□□□□□ -1.34
LRCH3-212ENST00000466845 SEPT2Q15019 361 aa6.7□□□□□ -1.34
LRCH3-212ENST00000466845 PPP2R5EQ16537 467 aa6.7□□□□□ -1.34
LRCH3-212ENST00000466845 LCA5Q86VQ0 697 aa6.7□□□□□ -1.34
LRCH3-212ENST00000466845 WDR75Q8IWA0 830 aaKnown RBP6.7□□□□□ -1.34
LRCH3-212ENST00000466845 MYO1HQ8N1T3 1032 aa6.7□□□□□ -1.34
LRCH3-212ENST00000466845 JMJD8Q96S16 334 aa6.7□□□□□ -1.34
LRCH3-212ENST00000466845 POLR3CQ9BUI4 534 aaPredicted RBP6.7□□□□□ -1.34
LRCH3-212ENST00000466845 PDGFDQ9GZP0 370 aaPredicted RBP6.7□□□□□ -1.34
LRCH3-212ENST00000466845 TNFRSF12AQ9NP84 129 aa6.7□□□□□ -1.34
LRCH3-212ENST00000466845 PDLIM7Q9NR12 457 aa6.7□□□□□ -1.34
LRCH3-212ENST00000466845 KLHL14Q9P2G3 628 aa6.7□□□□□ -1.34
LRCH3-212ENST00000466845 ZNF69Q9UC07 566 aa6.7□□□□□ -1.34
LRCH3-212ENST00000466845 IP6K2Q9UHH9 426 aa6.7□□□□□ -1.34
LRCH3-212ENST00000466845 MBD1Q9UIS9 605 aaPredicted RBP6.7□□□□□ -1.34
LRCH3-212ENST00000466845 INTUQ9ULD6 942 aa6.7□□□□□ -1.34
LRCH3-212ENST00000466845 CEP83Q9Y592 693 aa6.7□□□□□ -1.34
LRCH3-212ENST00000466845 ERCC6L2Q5T890 1561 aa6.69□□□□□ -1.34
LRCH3-212ENST00000466845 PRG4Q92954 1404 aaPredicted RBP6.69□□□□□ -1.34
LRCH3-212ENST00000466845 A0A1W2PRQ8 180 aa6.69□□□□□ -1.34
LRCH3-212ENST00000466845 ERICH4A6NGS2 130 aa6.69□□□□□ -1.34
LRCH3-212ENST00000466845 PRSS47A8MTI9 375 aa6.69□□□□□ -1.34
LRCH3-212ENST00000466845 SRGAP3O43295 1099 aa6.69□□□□□ -1.34
LRCH3-212ENST00000466845 CAND2O75155 1236 aa6.69□□□□□ -1.34
LRCH3-212ENST00000466845 NBPF7P0C2Y1 421 aaPredicted RBP6.69□□□□□ -1.34
LRCH3-212ENST00000466845 ATF4P18848 351 aaPredicted RBP6.69□□□□□ -1.34
LRCH3-212ENST00000466845 DNAJA1P31689 397 aaKnown RBP6.69□□□□□ -1.34
LRCH3-212ENST00000466845 L1CAMP32004 1257 aa6.69□□□□□ -1.34
LRCH3-212ENST00000466845 TSPAN7P41732 249 aa6.69□□□□□ -1.34
LRCH3-212ENST00000466845 MAPKAPK2P49137 400 aa6.69□□□□□ -1.34
LRCH3-212ENST00000466845 CEBPAP49715 358 aaPredicted RBP6.69□□□□□ -1.34
LRCH3-212ENST00000466845 RAB3GAP1Q15042 981 aa6.69□□□□□ -1.34
LRCH3-212ENST00000466845 TAF11Q15544 211 aa6.69□□□□□ -1.34
LRCH3-212ENST00000466845 TNNI3KQ59H18 835 aa6.69□□□□□ -1.34
LRCH3-212ENST00000466845 SOGA3Q5TF21 947 aa6.69□□□□□ -1.34
LRCH3-212ENST00000466845 MFSD4BQ5TF39 518 aa6.69□□□□□ -1.34
LRCH3-212ENST00000466845 POMZP3Q6PJE2 187 aa6.69□□□□□ -1.34
LRCH3-212ENST00000466845 PAQR3Q6TCH7 311 aa6.69□□□□□ -1.34
LRCH3-212ENST00000466845 ACBD3Q9H3P7 528 aa6.69□□□□□ -1.34
LRCH3-212ENST00000466845 IMPACTQ9P2X3 320 aa6.69□□□□□ -1.34
LRCH3-212ENST00000466845 MAFFQ9ULX9 164 aa6.69□□□□□ -1.34
LRCH3-212ENST00000466845 KCTD3Q9Y597 815 aa6.69□□□□□ -1.34
LRCH3-212ENST00000466845 IRAK3Q9Y616 596 aa6.69□□□□□ -1.34
LRCH3-212ENST00000466845 SETD1BQ9UPS6 1966 aaKnown RBP6.68□□□□□ -1.34
LRCH3-212ENST00000466845 AURKAO14965 403 aa6.68□□□□□ -1.34
LRCH3-212ENST00000466845 CTAGE5O15320 804 aa6.68□□□□□ -1.34
LRCH3-212ENST00000466845 SLC26A4O43511 780 aa6.68□□□□□ -1.34
LRCH3-212ENST00000466845 KIF5CO60282 957 aa6.68□□□□□ -1.34
LRCH3-212ENST00000466845 EFEMP2O95967 443 aa6.68□□□□□ -1.34
LRCH3-212ENST00000466845 CYBBP04839 570 aa6.68□□□□□ -1.34
LRCH3-212ENST00000466845 CD3EP07766 207 aa6.68□□□□□ -1.34
LRCH3-212ENST00000466845 ABCD1P33897 745 aa6.68□□□□□ -1.34
LRCH3-212ENST00000466845 PIK3CAP42336 1068 aa6.68□□□□□ -1.34
LRCH3-212ENST00000466845 CASP2P42575 452 aa6.68□□□□□ -1.34
LRCH3-212ENST00000466845 GALK1P51570 392 aa6.68□□□□□ -1.34
LRCH3-212ENST00000466845 AMPD2Q01433 879 aa6.68□□□□□ -1.34
LRCH3-212ENST00000466845 MVKQ03426 396 aa6.68□□□□□ -1.34
LRCH3-212ENST00000466845 BRD3Q15059 726 aa6.68□□□□□ -1.34
LRCH3-212ENST00000466845 TOMM20Q15388 145 aa6.68□□□□□ -1.34
LRCH3-212ENST00000466845 TCERG1LQ5VWI1 586 aa6.68□□□□□ -1.34
LRCH3-212ENST00000466845 VHLLQ6RSH7 139 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms