RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 IL23AQ9NPF7 189 aa11.59□□□□□ -0.55
CD40-204ENST00000466205 SH3GLB2Q9NR46 395 aa11.59□□□□□ -0.55
CD40-204ENST00000466205 SETD4Q9NVD3 440 aa11.59□□□□□ -0.55
CD40-204ENST00000466205 ORC3Q9UBD5 711 aaPredicted RBP11.59□□□□□ -0.55
CD40-204ENST00000466205 SLC9A2Q9UBY0 812 aa11.59□□□□□ -0.55
CD40-204ENST00000466205 RANBP2P49792 3224 aaKnown RBP11.58□□□□□ -0.56
CD40-204ENST00000466205 IGLV3-22A0A075B6J6 115 aa11.58□□□□□ -0.56
CD40-204ENST00000466205 ZBBXA8MT70 800 aa11.58□□□□□ -0.56
CD40-204ENST00000466205 MEIS1O00470 390 aa11.58□□□□□ -0.56
CD40-204ENST00000466205 FGBP02675 491 aa11.58□□□□□ -0.56
CD40-204ENST00000466205 CTSHP09668 335 aa11.58□□□□□ -0.56
CD40-204ENST00000466205 ACTR2P61160 394 aa11.58□□□□□ -0.56
CD40-204ENST00000466205 IGBP1P78318 339 aa11.58□□□□□ -0.56
CD40-204ENST00000466205 BFSP2Q13515 415 aa11.58□□□□□ -0.56
CD40-204ENST00000466205 PSRC1Q6PGN9 363 aaPredicted RBP11.58□□□□□ -0.56
CD40-204ENST00000466205 CCDC83Q8IWF9 413 aa11.58□□□□□ -0.56
CD40-204ENST00000466205 NSUN7Q8NE18 718 aaKnown RBP11.58□□□□□ -0.56
CD40-204ENST00000466205 OXER1Q8TDS5 423 aa11.58□□□□□ -0.56
CD40-204ENST00000466205 TBCKQ8TEA7 893 aa11.58□□□□□ -0.56
CD40-204ENST00000466205 ATP6V0A1Q93050 837 aa11.58□□□□□ -0.56
CD40-204ENST00000466205 IL17RAQ96F46 866 aa11.58□□□□□ -0.56
CD40-204ENST00000466205 KIF2CQ99661 725 aa11.58□□□□□ -0.56
CD40-204ENST00000466205 ZNF577Q9BSK1 485 aa11.58□□□□□ -0.56
CD40-204ENST00000466205 FTOQ9C0B1 505 aaKnown RBP eCLIP11.58□□□□□ -0.56
CD40-204ENST00000466205 CXXC1Q9P0U4 656 aaPredicted RBP11.58□□□□□ -0.56
CD40-204ENST00000466205 ZNF215Q9UL58 517 aaPredicted RBP11.58□□□□□ -0.56
CD40-204ENST00000466205 SCN5AQ14524 2016 aa11.57□□□□□ -0.56
CD40-204ENST00000466205 MAFGO15525 162 aa11.57□□□□□ -0.56
CD40-204ENST00000466205 EDIL3O43854 480 aa11.57□□□□□ -0.56
CD40-204ENST00000466205 TDP2O95551 362 aa11.57□□□□□ -0.56
CD40-204ENST00000466205 CCNE2O96020 404 aa11.57□□□□□ -0.56
CD40-204ENST00000466205 CYP3A4P08684 503 aa11.57□□□□□ -0.56
CD40-204ENST00000466205 CKBP12277 381 aa11.57□□□□□ -0.56
CD40-204ENST00000466205 FDPSP14324 419 aaKnown RBP11.57□□□□□ -0.56
CD40-204ENST00000466205 THPOP40225 353 aa11.57□□□□□ -0.56
CD40-204ENST00000466205 PTK7Q13308 1070 aa11.57□□□□□ -0.56
CD40-204ENST00000466205 NPY5RQ15761 445 aa11.57□□□□□ -0.56
CD40-204ENST00000466205 INF2Q27J81 1249 aa11.57□□□□□ -0.56
CD40-204ENST00000466205 LRRC8DQ7L1W4 858 aa11.57□□□□□ -0.56
CD40-204ENST00000466205 CCDC155Q8N6L0 562 aa11.57□□□□□ -0.56
CD40-204ENST00000466205 CRYGNQ8WXF5 182 aa11.57□□□□□ -0.56
CD40-204ENST00000466205 VWCEQ96DN2 955 aa11.57□□□□□ -0.56
CD40-204ENST00000466205 PCYT2Q99447 389 aa11.57□□□□□ -0.56
CD40-204ENST00000466205 PHF20Q9BVI0 1012 aa11.57□□□□□ -0.56
CD40-204ENST00000466205 NFASCO94856 1347 aa11.57□□□□□ -0.56
CD40-204ENST00000466205 STK36Q9NRP7 1315 aa11.57□□□□□ -0.56
CD40-204ENST00000466205 LAMA3Q16787 3333 aa11.57□□□□□ -0.56
CD40-204ENST00000466205 TRIOBPQ9H2D6 2365 aa11.56□□□□□ -0.56
CD40-204ENST00000466205 M0R2N6 131 aa11.56□□□□□ -0.56
CD40-204ENST00000466205 IPO5O00410 1097 aaKnown RBP11.56□□□□□ -0.56
CD40-204ENST00000466205 BACH1O14867 736 aa11.56□□□□□ -0.56
CD40-204ENST00000466205 CHMP2AO43633 222 aa11.56□□□□□ -0.56
CD40-204ENST00000466205 XBP1P17861 261 aa11.56□□□□□ -0.56
CD40-204ENST00000466205 PBX2P40425 430 aa11.56□□□□□ -0.56
CD40-204ENST00000466205 GUCY1B3Q02153 619 aa11.56□□□□□ -0.56
CD40-204ENST00000466205 ZNF618Q5T7W0 954 aa11.56□□□□□ -0.56
CD40-204ENST00000466205 MCTP2Q6DN12 878 aa11.56□□□□□ -0.56
CD40-204ENST00000466205 RUFY4Q6ZNE9 571 aa11.56□□□□□ -0.56
CD40-204ENST00000466205 PIK3AP1Q6ZUJ8 805 aa11.56□□□□□ -0.56
CD40-204ENST00000466205 NIPA1Q7RTP0 329 aa11.56□□□□□ -0.56
CD40-204ENST00000466205 RPUSD2Q8IZ73 545 aaKnown RBP11.56□□□□□ -0.56
CD40-204ENST00000466205 DEFB123Q8N688 67 aa11.56□□□□□ -0.56
CD40-204ENST00000466205 CAGE1Q8TC20 777 aa11.56□□□□□ -0.56
CD40-204ENST00000466205 LMBR1Q8WVP7 490 aa11.56□□□□□ -0.56
CD40-204ENST00000466205 TANC1Q9C0D5 1861 aa11.56□□□□□ -0.56
CD40-204ENST00000466205 AZI2Q9H6S1 392 aa11.56□□□□□ -0.56
CD40-204ENST00000466205 ERAP1Q9NZ08 941 aa11.56□□□□□ -0.56
CD40-204ENST00000466205 TRPC6Q9Y210 931 aa11.56□□□□□ -0.56
CD40-204ENST00000466205 FAM205CA6NFA0 338 aa11.55□□□□□ -0.56
CD40-204ENST00000466205 PITPNM1O00562 1244 aa11.55□□□□□ -0.56
CD40-204ENST00000466205 MSH4O15457 936 aa11.55□□□□□ -0.56
CD40-204ENST00000466205 SELPP16109 830 aa11.55□□□□□ -0.56
CD40-204ENST00000466205 STAT5BP51692 787 aa11.55□□□□□ -0.56
CD40-204ENST00000466205 RABGGTBP53611 331 aa11.55□□□□□ -0.56
CD40-204ENST00000466205 SETQ01105 290 aaPredicted RBP11.55□□□□□ -0.56
CD40-204ENST00000466205 PPFIA1Q13136 1202 aa11.55□□□□□ -0.56
CD40-204ENST00000466205 NR5A1Q13285 461 aa11.55□□□□□ -0.56
CD40-204ENST00000466205 GPNMBQ14956 572 aa11.55□□□□□ -0.56
CD40-204ENST00000466205 NONOQ15233 471 aaKnown RBP eCLIP11.55□□□□□ -0.56
CD40-204ENST00000466205 TCTN1Q2MV58 587 aa11.55□□□□□ -0.56
CD40-204ENST00000466205 TRIM71Q2Q1W2 868 aaKnown RBP11.55□□□□□ -0.56
CD40-204ENST00000466205 LETM2Q2VYF4 491 aa11.55□□□□□ -0.56
CD40-204ENST00000466205 EARS2Q5JPH6 523 aaKnown RBP11.55□□□□□ -0.56
CD40-204ENST00000466205 CCDC60Q8IWA6 550 aaPredicted RBP11.55□□□□□ -0.56
CD40-204ENST00000466205 TEX2Q8IWB9 1127 aa11.55□□□□□ -0.56
CD40-204ENST00000466205 DAGLBQ8NCG7 672 aa11.55□□□□□ -0.56
CD40-204ENST00000466205 AFAP1L1Q8TED9 768 aa11.55□□□□□ -0.56
CD40-204ENST00000466205 TRAPPC12Q8WVT3 735 aa11.55□□□□□ -0.56
CD40-204ENST00000466205 HERVK_113Q902F9 699 aa11.55□□□□□ -0.56
CD40-204ENST00000466205 LENG9Q96B70 501 aa11.55□□□□□ -0.56
CD40-204ENST00000466205 OSBPL7Q9BZF2 842 aa11.55□□□□□ -0.56
CD40-204ENST00000466205 SMARCAD1Q9H4L7 1026 aa11.55□□□□□ -0.56
CD40-204ENST00000466205 UPF2Q9HAU5 1272 aaKnown RBP11.55□□□□□ -0.56
CD40-204ENST00000466205 TCEAL9Q9UHQ7 104 aa11.55□□□□□ -0.56
CD40-204ENST00000466205 LIMCH1Q9UPQ0 1083 aa11.55□□□□□ -0.56
CD40-204ENST00000466205 SAMM50Q9Y512 469 aa11.55□□□□□ -0.56
CD40-204ENST00000466205 GTF3C3Q9Y5Q9 886 aa11.55□□□□□ -0.56
CD40-204ENST00000466205 EMSYQ7Z589 1322 aa11.55□□□□□ -0.56
CD40-204ENST00000466205 SZT2Q5T011 3432 aa11.54□□□□□ -0.56
CD40-204ENST00000466205 CCDC194A0A1B0GVG4 234 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms