RNA–Protein interactions for RNA: ENST00000465741.1

SPTA1-203, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-203ENST00000465741 PCDH11XQ9BZA7 1347 aa8.47□□□□□ -1.05
SPTA1-203ENST00000465741 PCDH11YQ9BZA8 1340 aa8.47□□□□□ -1.05
SPTA1-203ENST00000465741 OVOS2A0A0G2JMS6 1433 aa8.46□□□□□ -1.05
SPTA1-203ENST00000465741 TRBV23-1A0A0A0MS06 115 aa8.46□□□□□ -1.06
SPTA1-203ENST00000465741 TCERG1O14776 1098 aaKnown RBP8.46□□□□□ -1.06
SPTA1-203ENST00000465741 CPP00450 1065 aa8.46□□□□□ -1.06
SPTA1-203ENST00000465741 CD3EP07766 207 aa8.46□□□□□ -1.06
SPTA1-203ENST00000465741 CT47B1P0C2W7 299 aaPredicted RBP8.46□□□□□ -1.06
SPTA1-203ENST00000465741 TAL1P17542 331 aaPredicted RBP8.46□□□□□ -1.06
SPTA1-203ENST00000465741 CTSKP43235 329 aa8.46□□□□□ -1.06
SPTA1-203ENST00000465741 IRAK1P51617 712 aa8.46□□□□□ -1.06
SPTA1-203ENST00000465741 SLC39A6Q13433 755 aa8.46□□□□□ -1.06
SPTA1-203ENST00000465741 LINC00116Q8NCU8 138 aa8.46□□□□□ -1.06
SPTA1-203ENST00000465741 KCTD13Q8WZ19 329 aa8.46□□□□□ -1.06
SPTA1-203ENST00000465741 SLC52A2Q9HAB3 445 aa8.46□□□□□ -1.06
SPTA1-203ENST00000465741 CYP26B1Q9NR63 512 aa8.46□□□□□ -1.06
SPTA1-203ENST00000465741 SEMA3GQ9NS98 782 aa8.46□□□□□ -1.06
SPTA1-203ENST00000465741 VAV3Q9UKW4 847 aa8.46□□□□□ -1.06
SPTA1-203ENST00000465741 MINPP1Q9UNW1 487 aa8.46□□□□□ -1.06
SPTA1-203ENST00000465741 GPR55Q9Y2T6 319 aaPredicted RBP8.46□□□□□ -1.06
SPTA1-203ENST00000465741 CEMIPQ8WUJ3 1361 aa8.46□□□□□ -1.06
SPTA1-203ENST00000465741 COL18A1P39060 1754 aa8.45□□□□□ -1.06
SPTA1-203ENST00000465741 PHRF1Q9P1Y6 1649 aaKnown RBP8.45□□□□□ -1.06
SPTA1-203ENST00000465741 ERVV-2B6SEH9 535 aa8.45□□□□□ -1.06
SPTA1-203ENST00000465741 PRODHO43272 600 aa8.45□□□□□ -1.06
SPTA1-203ENST00000465741 TBX1O43435 398 aa8.45□□□□□ -1.06
SPTA1-203ENST00000465741 SNRPB2P08579 225 aaKnown RBP8.45□□□□□ -1.06
SPTA1-203ENST00000465741 PABPC1P11940 636 aaKnown RBP8.45□□□□□ -1.06
SPTA1-203ENST00000465741 EIF4A1P60842 406 aaKnown RBP8.45□□□□□ -1.06
SPTA1-203ENST00000465741 SUMO1P63165 101 aaKnown RBP8.45□□□□□ -1.06
SPTA1-203ENST00000465741 PRKCQQ04759 706 aa8.45□□□□□ -1.06
SPTA1-203ENST00000465741 TWISTNBQ3B726 338 aaPredicted RBP8.45□□□□□ -1.06
SPTA1-203ENST00000465741 RNF111Q6ZNA4 994 aa8.45□□□□□ -1.06
SPTA1-203ENST00000465741 STK11IPQ8N1F8 1099 aa8.45□□□□□ -1.06
SPTA1-203ENST00000465741 MARCH10Q8NA82 808 aaPredicted RBP8.45□□□□□ -1.06
SPTA1-203ENST00000465741 SSH1Q8WYL5 1049 aa8.45□□□□□ -1.06
SPTA1-203ENST00000465741 FEZ1Q99689 392 aa8.45□□□□□ -1.06
SPTA1-203ENST00000465741 IER2Q9BTL4 223 aa8.45□□□□□ -1.06
SPTA1-203ENST00000465741 COL22A1Q8NFW1 1626 aaPredicted RBP8.44□□□□□ -1.06
SPTA1-203ENST00000465741 RGPD1P0DJD0 1748 aa8.44□□□□□ -1.06
SPTA1-203ENST00000465741 DNAJC25-GNG10A0A024R161 153 aa8.44□□□□□ -1.06
SPTA1-203ENST00000465741 CAPNS1P04632 268 aa8.44□□□□□ -1.06
SPTA1-203ENST00000465741 SYPP08247 313 aa8.44□□□□□ -1.06
SPTA1-203ENST00000465741 VAV1P15498 845 aa8.44□□□□□ -1.06
SPTA1-203ENST00000465741 YBX3P16989 372 aaKnown RBP eCLIP8.44□□□□□ -1.06
SPTA1-203ENST00000465741 KCNJ6P48051 423 aa8.44□□□□□ -1.06
SPTA1-203ENST00000465741 GP2P55259 537 aaKnown RBP8.44□□□□□ -1.06
SPTA1-203ENST00000465741 GFRA1P56159 465 aa8.44□□□□□ -1.06
SPTA1-203ENST00000465741 RRP1P56182 461 aaKnown RBP8.44□□□□□ -1.06
SPTA1-203ENST00000465741 MAP4K2Q12851 820 aa8.44□□□□□ -1.06
SPTA1-203ENST00000465741 DPY19L1Q2PZI1 675 aa8.44□□□□□ -1.06
SPTA1-203ENST00000465741 GAB4Q2WGN9 574 aa8.44□□□□□ -1.06
SPTA1-203ENST00000465741 EXOC2Q96KP1 924 aa8.44□□□□□ -1.06
SPTA1-203ENST00000465741 TMX1Q9H3N1 280 aa8.44□□□□□ -1.06
SPTA1-203ENST00000465741 BSDC1Q9NW68 430 aaPredicted RBP8.44□□□□□ -1.06
SPTA1-203ENST00000465741 TCFL5Q9UL49 500 aa8.44□□□□□ -1.06
SPTA1-203ENST00000465741 MRPS23Q9Y3D9 190 aaKnown RBP8.44□□□□□ -1.06
SPTA1-203ENST00000465741 BACE2Q9Y5Z0 518 aa8.44□□□□□ -1.06
SPTA1-203ENST00000465741 RNF123Q5XPI4 1314 aa8.44□□□□□ -1.06
SPTA1-203ENST00000465741 RBAK-RBAKDNI3L0D1 243 aa8.43□□□□□ -1.06
SPTA1-203ENST00000465741 AURKAO14965 403 aa8.43□□□□□ -1.06
SPTA1-203ENST00000465741 COBLO75128 1261 aa8.43□□□□□ -1.06
SPTA1-203ENST00000465741 ZNF205O95201 554 aa8.43□□□□□ -1.06
SPTA1-203ENST00000465741 ASMTLO95671 621 aa8.43□□□□□ -1.06
SPTA1-203ENST00000465741 SCG5P05408 212 aa8.43□□□□□ -1.06
SPTA1-203ENST00000465741 GRIA2P42262 883 aa8.43□□□□□ -1.06
SPTA1-203ENST00000465741 AOC3Q16853 763 aa8.43□□□□□ -1.06
SPTA1-203ENST00000465741 MSMPQ1L6U9 139 aa8.43□□□□□ -1.06
SPTA1-203ENST00000465741 YOD1Q5VVQ6 348 aaPredicted RBP8.43□□□□□ -1.06
SPTA1-203ENST00000465741 ZNF790Q6PG37 636 aa8.43□□□□□ -1.06
SPTA1-203ENST00000465741 KIAA0907Q7Z7F0 614 aaPredicted RBP8.43□□□□□ -1.06
SPTA1-203ENST00000465741 CREG2Q8IUH2 290 aa8.43□□□□□ -1.06
SPTA1-203ENST00000465741 KSR1Q8IVT5 923 aa8.43□□□□□ -1.06
SPTA1-203ENST00000465741 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.43□□□□□ -1.06
SPTA1-203ENST00000465741 PIGBQ92521 554 aa8.43□□□□□ -1.06
SPTA1-203ENST00000465741 FRAT1Q92837 279 aaPredicted RBP8.43□□□□□ -1.06
SPTA1-203ENST00000465741 KISS1RQ969F8 398 aaPredicted RBP8.43□□□□□ -1.06
SPTA1-203ENST00000465741 SYTL4Q96C24 671 aaPredicted RBP8.43□□□□□ -1.06
SPTA1-203ENST00000465741 SMC4Q9NTJ3 1288 aa8.43□□□□□ -1.06
SPTA1-203ENST00000465741 TMOD3Q9NYL9 352 aa8.43□□□□□ -1.06
SPTA1-203ENST00000465741 PLEKHG2Q9H7P9 1386 aa8.43□□□□□ -1.06
SPTA1-203ENST00000465741 DISP2A7MBM2 1401 aa8.43□□□□□ -1.06
SPTA1-203ENST00000465741 LMO7Q8WWI1 1683 aa8.43□□□□□ -1.06
SPTA1-203ENST00000465741 STXBP3O00186 592 aa8.42□□□□□ -1.06
SPTA1-203ENST00000465741 NCLP19338 710 aaKnown RBP8.42□□□□□ -1.06
SPTA1-203ENST00000465741 EIF2S2P20042 333 aaKnown RBP8.42□□□□□ -1.06
SPTA1-203ENST00000465741 HOXA10P31260 410 aaPredicted RBP8.42□□□□□ -1.06
SPTA1-203ENST00000465741 L1CAMP32004 1257 aa8.42□□□□□ -1.06
SPTA1-203ENST00000465741 SCRN1Q12765 414 aa8.42□□□□□ -1.06
SPTA1-203ENST00000465741 ALDH1L2Q3SY69 923 aa8.42□□□□□ -1.06
SPTA1-203ENST00000465741 FAM209AQ5JX71 171 aa8.42□□□□□ -1.06
SPTA1-203ENST00000465741 FOXB2Q5VYV0 432 aa8.42□□□□□ -1.06
SPTA1-203ENST00000465741 TTC5Q8N0Z6 440 aa8.42□□□□□ -1.06
SPTA1-203ENST00000465741 SLC12A9Q9BXP2 914 aa8.42□□□□□ -1.06
SPTA1-203ENST00000465741 FOXP3Q9BZS1 431 aa8.42□□□□□ -1.06
SPTA1-203ENST00000465741 ATP13A1Q9HD20 1204 aa8.42□□□□□ -1.06
SPTA1-203ENST00000465741 NOB1Q9ULX3 412 aaKnown RBP8.42□□□□□ -1.06
SPTA1-203ENST00000465741 KDM6AO15550 1401 aaPredicted RBP8.42□□□□□ -1.06
SPTA1-203ENST00000465741 CRYBG1Q9Y4K1 1723 aa8.42□□□□□ -1.06
SPTA1-203ENST00000465741 LTN1O94822 1766 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms