RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 KLHL30Q0D2K2 578 aa21.62■■□□□ 1.05
SDF4-205ENST00000465727 FAM228AQ86W67 206 aa21.62■■□□□ 1.05
SDF4-205ENST00000465727 CDK5RAP3Q96JB5 506 aa21.62■■□□□ 1.05
SDF4-205ENST00000465727 LSM14BQ9BX40 385 aaKnown RBP21.62■■□□□ 1.05
SDF4-205ENST00000465727 COL16A1Q07092 1604 aaPredicted RBP21.62■■□□□ 1.05
SDF4-205ENST00000465727 FXR2P51116 673 aaKnown RBP eCLIP21.62■■□□□ 1.05
SDF4-205ENST00000465727 EIF3BP55884 814 aaKnown RBP21.62■■□□□ 1.05
SDF4-205ENST00000465727 EVX2Q03828 476 aa21.62■■□□□ 1.05
SDF4-205ENST00000465727 BYSLQ13895 437 aaKnown RBP21.62■■□□□ 1.05
SDF4-205ENST00000465727 SEPT2Q15019 361 aa21.62■■□□□ 1.05
SDF4-205ENST00000465727 ZCWPW2Q504Y3 356 aa21.62■■□□□ 1.05
SDF4-205ENST00000465727 MYOCDQ8IZQ8 938 aa21.62■■□□□ 1.05
SDF4-205ENST00000465727 RAB34Q9BZG1 259 aa21.62■■□□□ 1.05
SDF4-205ENST00000465727 IL17RBQ9NRM6 502 aa21.62■■□□□ 1.05
SDF4-205ENST00000465727 FBXL5Q9UKA1 691 aa21.62■■□□□ 1.05
SDF4-205ENST00000465727 KIF13BQ9NQT8 1826 aa21.61■■□□□ 1.05
SDF4-205ENST00000465727 SART1O43290 800 aaKnown RBP21.61■■□□□ 1.05
SDF4-205ENST00000465727 TMOD1P28289 359 aa21.61■■□□□ 1.05
SDF4-205ENST00000465727 RNASE9P60153 205 aaKnown RBP21.61■■□□□ 1.05
SDF4-205ENST00000465727 CPLX4Q7Z7G2 160 aa21.61■■□□□ 1.05
SDF4-205ENST00000465727 GPIHBP1Q8IV16 184 aa21.61■■□□□ 1.05
SDF4-205ENST00000465727 OR2W6PQ8NHA6 318 aa21.61■■□□□ 1.05
SDF4-205ENST00000465727 UBLCP1Q8WVY7 318 aaPredicted RBP21.61■■□□□ 1.05
SDF4-205ENST00000465727 SEC14L1Q92503 715 aa21.61■■□□□ 1.05
SDF4-205ENST00000465727 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.61■■□□□ 1.051e-10■■□□□ 11.9
SDF4-205ENST00000465727 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.61■■□□□ 1.05
SDF4-205ENST00000465727 AHDC1Q5TGY3 1603 aaPredicted RBP21.61■■□□□ 1.05
SDF4-205ENST00000465727 MYH7BA7E2Y1 1941 aa21.61■■□□□ 1.05
SDF4-205ENST00000465727 A0A1B0GUA9 196 aa21.6■■□□□ 1.05
SDF4-205ENST00000465727 PALM3A6NDB9 673 aaPredicted RBP21.6■■□□□ 1.05
SDF4-205ENST00000465727 PDHBP11177 359 aa21.6■■□□□ 1.05
SDF4-205ENST00000465727 ERCC3P19447 782 aa21.6■■□□□ 1.05
SDF4-205ENST00000465727 NAPAP54920 295 aa21.6■■□□□ 1.05
SDF4-205ENST00000465727 ASIC2Q16515 512 aa21.6■■□□□ 1.05
SDF4-205ENST00000465727 TMEM266Q2M3C6 531 aa21.6■■□□□ 1.05
SDF4-205ENST00000465727 SLC35G1Q2M3R5 365 aa21.6■■□□□ 1.05
SDF4-205ENST00000465727 CCDC26Q8TAB7 109 aa21.6■■□□□ 1.05
SDF4-205ENST00000465727 RAD54LQ92698 747 aa21.6■■□□□ 1.05
SDF4-205ENST00000465727 HVCN1Q96D96 273 aa21.6■■□□□ 1.05
SDF4-205ENST00000465727 PSMD1Q99460 953 aa21.6■■□□□ 1.05
SDF4-205ENST00000465727 SPZ1Q9BXG8 430 aa21.6■■□□□ 1.05
SDF4-205ENST00000465727 ADAMTS1Q9UHI8 967 aa21.6■■□□□ 1.05
SDF4-205ENST00000465727 NOVA2Q9UNW9 492 aaKnown RBP21.6■■□□□ 1.05
SDF4-205ENST00000465727 BZW2Q9Y6E2 419 aaKnown RBP21.6■■□□□ 1.05
SDF4-205ENST00000465727 CYP2D6P10635 497 aa21.6■■□□□ 1.05
SDF4-205ENST00000465727 MECOMQ03112 1051 aa21.6■■□□□ 1.05
SDF4-205ENST00000465727 RAPGEF1Q13905 1077 aa21.6■■□□□ 1.05
SDF4-205ENST00000465727 SPRED3Q2MJR0 410 aa21.6■■□□□ 1.05
SDF4-205ENST00000465727 DYMQ7RTS9 669 aa21.6■■□□□ 1.05
SDF4-205ENST00000465727 TMC3Q7Z5M5 1100 aa21.6■■□□□ 1.05
SDF4-205ENST00000465727 SCLT1Q96NL6 688 aa21.6■■□□□ 1.05
SDF4-205ENST00000465727 PNMA5Q96PV4 448 aa21.6■■□□□ 1.05
SDF4-205ENST00000465727 FAM114A2Q9NRY5 505 aa21.6■■□□□ 1.05
SDF4-205ENST00000465727 BCCIPQ9P287 314 aaKnown RBP eCLIP21.6■■□□□ 1.05
SDF4-205ENST00000465727 CEP104O60308 925 aa21.59■■□□□ 1.05
SDF4-205ENST00000465727 GSTA1P08263 222 aa21.59■■□□□ 1.05
SDF4-205ENST00000465727 DRD4P21917 467 aa21.59■■□□□ 1.05
SDF4-205ENST00000465727 TEX11Q8IYF3 940 aa21.59■■□□□ 1.05
SDF4-205ENST00000465727 ZNF622Q969S3 477 aaKnown RBP eCLIP21.59■■□□□ 1.053e-8■■■□□ 17.8
SDF4-205ENST00000465727 CHMP6Q96FZ7 201 aa21.59■■□□□ 1.05
SDF4-205ENST00000465727 MTMR9Q96QG7 549 aa21.59■■□□□ 1.05
SDF4-205ENST00000465727 CNOT8Q9UFF9 292 aaKnown RBP21.59■■□□□ 1.05
SDF4-205ENST00000465727 ANXA13P27216 316 aa21.59■■□□□ 1.05
SDF4-205ENST00000465727 MAGOHP61326 146 aaKnown RBP21.59■■□□□ 1.05
SDF4-205ENST00000465727 PDIA5Q14554 519 aa21.59■■□□□ 1.05
SDF4-205ENST00000465727 TRIM59Q8IWR1 403 aa21.59■■□□□ 1.05
SDF4-205ENST00000465727 ANKS4BQ8N8V4 417 aa21.59■■□□□ 1.05
SDF4-205ENST00000465727 LRRC57Q8N9N7 239 aa21.59■■□□□ 1.05
SDF4-205ENST00000465727 MAGOHBQ96A72 148 aaKnown RBP21.59■■□□□ 1.05
SDF4-205ENST00000465727 PACSIN1Q9BY11 444 aa21.59■■□□□ 1.05
SDF4-205ENST00000465727 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.59■■□□□ 1.05
SDF4-205ENST00000465727 TRAF5O00463 557 aa21.58■■□□□ 1.05
SDF4-205ENST00000465727 NTSR2O95665 410 aa21.58■■□□□ 1.05
SDF4-205ENST00000465727 ERMARDQ5T6L9 678 aa21.58■■□□□ 1.05
SDF4-205ENST00000465727 MSL1Q68DK7 614 aa21.58■■□□□ 1.05
SDF4-205ENST00000465727 RASGEF1CQ8N431 466 aa21.58■■□□□ 1.05
SDF4-205ENST00000465727 LMBR1Q8WVP7 490 aa21.58■■□□□ 1.05
SDF4-205ENST00000465727 DDX12PQ92771 950 aa21.58■■□□□ 1.05
SDF4-205ENST00000465727 TLCD1Q96CP7 247 aa21.58■■□□□ 1.05
SDF4-205ENST00000465727 NEUROG2Q9H2A3 272 aa21.58■■□□□ 1.05
SDF4-205ENST00000465727 ROBO3Q96MS0 1386 aa21.58■■□□□ 1.04
SDF4-205ENST00000465727 SMCO2A6NFE2 343 aa21.57■■□□□ 1.04
SDF4-205ENST00000465727 PPIP5K2O43314 1243 aa21.57■■□□□ 1.04
SDF4-205ENST00000465727 TXKP42681 527 aa21.57■■□□□ 1.04
SDF4-205ENST00000465727 KRT71Q3SY84 523 aa21.57■■□□□ 1.04
SDF4-205ENST00000465727 TLDC1Q6P9B6 456 aa21.57■■□□□ 1.04
SDF4-205ENST00000465727 CRELD2Q6UXH1 353 aaPredicted RBP21.57■■□□□ 1.04
SDF4-205ENST00000465727 HOOK3Q86VS8 718 aa21.57■■□□□ 1.04
SDF4-205ENST00000465727 FAM133AQ8N9E0 248 aa21.57■■□□□ 1.04
SDF4-205ENST00000465727 TBCKQ8TEA7 893 aa21.57■■□□□ 1.04
SDF4-205ENST00000465727 FAM84BQ96KN1 310 aaPredicted RBP21.57■■□□□ 1.04
SDF4-205ENST00000465727 NOC2LQ9Y3T9 749 aaKnown RBP21.57■■□□□ 1.04
SDF4-205ENST00000465727 F8VZ95 297 aa21.57■■□□□ 1.04
SDF4-205ENST00000465727 KRIT1O00522 736 aa21.57■■□□□ 1.04
SDF4-205ENST00000465727 TRIM37O94972 964 aa21.57■■□□□ 1.04
SDF4-205ENST00000465727 CALCRLQ16602 461 aa21.57■■□□□ 1.04
SDF4-205ENST00000465727 SOGA3Q5TF21 947 aa21.57■■□□□ 1.04
SDF4-205ENST00000465727 DDX42Q86XP3 938 aaKnown RBP eCLIP21.57■■□□□ 1.04
SDF4-205ENST00000465727 CCDC197Q8NCU1 140 aa21.57■■□□□ 1.04
SDF4-205ENST00000465727 FAM129AQ9BZQ8 928 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms