RNA–Protein interactions for RNA: ENST00000465560.5

PTCD3-206, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 747 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-206ENST00000465560 NFRKBQ6P4R8 1299 aa22.97■■□□□ 1.27
PTCD3-206ENST00000465560 C7orf61Q8IZ16 206 aa22.97■■□□□ 1.27
PTCD3-206ENST00000465560 TOX2Q96NM4 488 aa22.97■■□□□ 1.27
PTCD3-206ENST00000465560 KCNMB3Q9NPA1 279 aa22.97■■□□□ 1.27
PTCD3-206ENST00000465560 TCEAL9Q9UHQ7 104 aa22.97■■□□□ 1.27
PTCD3-206ENST00000465560 TRIP12Q14669 1992 aaPredicted RBP22.97■■□□□ 1.27
PTCD3-206ENST00000465560 TBX3O15119 743 aa22.96■■□□□ 1.27
PTCD3-206ENST00000465560 PQBP1O60828 265 aaKnown RBP22.96■■□□□ 1.27
PTCD3-206ENST00000465560 GAS7O60861 476 aa22.96■■□□□ 1.27
PTCD3-206ENST00000465560 ATG7O95352 703 aa22.96■■□□□ 1.27
PTCD3-206ENST00000465560 TRAPPC10P48553 1259 aa22.96■■□□□ 1.27
PTCD3-206ENST00000465560 TLE2Q04725 743 aa22.96■■□□□ 1.27
PTCD3-206ENST00000465560 MFSD10Q14728 455 aa22.96■■□□□ 1.27
PTCD3-206ENST00000465560 UTP14CQ5TAP6 766 aaKnown RBP22.96■■□□□ 1.27
PTCD3-206ENST00000465560 POTEDQ86YR6 584 aa22.96■■□□□ 1.27
PTCD3-206ENST00000465560 FAM20AQ96MK3 541 aa22.96■■□□□ 1.27
PTCD3-206ENST00000465560 TEKT3Q9BXF9 490 aa22.96■■□□□ 1.27
PTCD3-206ENST00000465560 ZNF215Q9UL58 517 aaPredicted RBP22.96■■□□□ 1.27
PTCD3-206ENST00000465560 EMSYQ7Z589 1322 aa22.96■■□□□ 1.27
PTCD3-206ENST00000465560 H3BRB1 525 aa22.95■■□□□ 1.26
PTCD3-206ENST00000465560 CEP290O15078 2479 aa22.95■■□□□ 1.26
PTCD3-206ENST00000465560 LGR5O75473 907 aa22.95■■□□□ 1.26
PTCD3-206ENST00000465560 PSMD10O75832 226 aa22.95■■□□□ 1.26
PTCD3-206ENST00000465560 HSP90AA1P07900 732 aaKnown RBP22.95■■□□□ 1.26
PTCD3-206ENST00000465560 PTPN11Q06124 597 aaPredicted RBP22.95■■□□□ 1.26
PTCD3-206ENST00000465560 KIAA0753Q2KHM9 967 aa22.95■■□□□ 1.26
PTCD3-206ENST00000465560 TRIM50Q86XT4 487 aa22.95■■□□□ 1.26
PTCD3-206ENST00000465560 FAM126BQ8IXS8 530 aa22.95■■□□□ 1.26
PTCD3-206ENST00000465560 SMAP1Q8IYB5 467 aaPredicted RBP22.95■■□□□ 1.26
PTCD3-206ENST00000465560 GJA10Q969M2 543 aa22.95■■□□□ 1.26
PTCD3-206ENST00000465560 TUT1Q9H6E5 874 aaKnown RBP22.95■■□□□ 1.26
PTCD3-206ENST00000465560 NOL7Q9UMY1 257 aaKnown RBP22.95■■□□□ 1.26
PTCD3-206ENST00000465560 NR2E3Q9Y5X4 410 aa22.95■■□□□ 1.26
PTCD3-206ENST00000465560 LTBP2Q14767 1821 aa22.94■■□□□ 1.26
PTCD3-206ENST00000465560 DCDC2CA8MYV0 355 aa22.94■■□□□ 1.26
PTCD3-206ENST00000465560 ATP2B1P20020 1258 aa22.94■■□□□ 1.26
PTCD3-206ENST00000465560 ORC2Q13416 577 aaPredicted RBP22.94■■□□□ 1.26
PTCD3-206ENST00000465560 ABHD15Q6UXT9 468 aa22.94■■□□□ 1.26
PTCD3-206ENST00000465560 SESTD1Q86VW0 696 aa22.94■■□□□ 1.26
PTCD3-206ENST00000465560 HAS1Q92839 578 aa22.94■■□□□ 1.26
PTCD3-206ENST00000465560 PCYT2Q99447 389 aa22.94■■□□□ 1.26
PTCD3-206ENST00000465560 IGKV6D-21A0A0A0MT36 114 aa22.93■■□□□ 1.26
PTCD3-206ENST00000465560 VPS37CA5D8V6 355 aaPredicted RBP22.93■■□□□ 1.26
PTCD3-206ENST00000465560 NEMFO60524 1076 aa22.93■■□□□ 1.26
PTCD3-206ENST00000465560 SUPT20HL2P0C7V6 817 aa22.93■■□□□ 1.26
PTCD3-206ENST00000465560 SYT1P21579 422 aa22.93■■□□□ 1.26
PTCD3-206ENST00000465560 CHMP4BP1P59074 171 aa22.93■■□□□ 1.26
PTCD3-206ENST00000465560 FAM47CQ5HY64 1035 aa22.93■■□□□ 1.26
PTCD3-206ENST00000465560 TTC38Q5R3I4 469 aa22.93■■□□□ 1.26
PTCD3-206ENST00000465560 MIS18BP1Q6P0N0 1132 aa22.93■■□□□ 1.26
PTCD3-206ENST00000465560 B3GNT9Q6UX72 402 aa22.93■■□□□ 1.26
PTCD3-206ENST00000465560 SMARCAD1Q9H4L7 1026 aa22.93■■□□□ 1.26
PTCD3-206ENST00000465560 MYH15Q9Y2K3 1946 aa22.92■■□□□ 1.26
PTCD3-206ENST00000465560 WDR64B1ANS9 1081 aa22.92■■□□□ 1.26
PTCD3-206ENST00000465560 TLR3O15455 904 aaKnown RBP22.92■■□□□ 1.26
PTCD3-206ENST00000465560 CD4P01730 458 aa22.92■■□□□ 1.26
PTCD3-206ENST00000465560 CLTBP09497 229 aa22.92■■□□□ 1.26
PTCD3-206ENST00000465560 MCM7P33993 719 aa22.92■■□□□ 1.26
PTCD3-206ENST00000465560 FAAP100Q0VG06 881 aa22.92■■□□□ 1.26
PTCD3-206ENST00000465560 CALCRLQ16602 461 aa22.92■■□□□ 1.26
PTCD3-206ENST00000465560 SLFN12Q8IYM2 578 aa22.92■■□□□ 1.26
PTCD3-206ENST00000465560 C7orf31Q8N865 590 aa22.92■■□□□ 1.26
PTCD3-206ENST00000465560 PPP1R13LQ8WUF5 828 aa22.92■■□□□ 1.26
PTCD3-206ENST00000465560 GLG1Q92896 1179 aa22.92■■□□□ 1.26
PTCD3-206ENST00000465560 UNC45AQ9H3U1 944 aa22.92■■□□□ 1.26
PTCD3-206ENST00000465560 AZI2Q9H6S1 392 aa22.92■■□□□ 1.26
PTCD3-206ENST00000465560 PDLIM7Q9NR12 457 aa22.92■■□□□ 1.26
PTCD3-206ENST00000465560 ERAP1Q9NZ08 941 aa22.92■■□□□ 1.26
PTCD3-206ENST00000465560 PCDHA10Q9Y5I2 948 aa22.92■■□□□ 1.26
PTCD3-206ENST00000465560 B4GALT4O60513 344 aa22.91■■□□□ 1.26
PTCD3-206ENST00000465560 BAG4O95429 457 aaKnown RBP22.91■■□□□ 1.26
PTCD3-206ENST00000465560 SFNP31947 248 aa22.91■■□□□ 1.26
PTCD3-206ENST00000465560 TOB1P50616 345 aaPredicted RBP22.91■■□□□ 1.26
PTCD3-206ENST00000465560 JAK3P52333 1124 aa22.91■■□□□ 1.26
PTCD3-206ENST00000465560 PLPPR4Q7Z2D5 763 aa22.91■■□□□ 1.26
PTCD3-206ENST00000465560 CCDC60Q8IWA6 550 aaPredicted RBP22.91■■□□□ 1.26
PTCD3-206ENST00000465560 RDM1Q8NG50 284 aa22.91■■□□□ 1.26
PTCD3-206ENST00000465560 AFAP1L1Q8TED9 768 aa22.91■■□□□ 1.26
PTCD3-206ENST00000465560 HDAC6Q9UBN7 1215 aa22.91■■□□□ 1.26
PTCD3-206ENST00000465560 GTF2IRD1Q9UHL9 959 aa22.91■■□□□ 1.26
PTCD3-206ENST00000465560 VAV3Q9UKW4 847 aa22.91■■□□□ 1.26
PTCD3-206ENST00000465560 BACH1O14867 736 aa22.9■■□□□ 1.26
PTCD3-206ENST00000465560 CHMP2AO43633 222 aa22.9■■□□□ 1.26
PTCD3-206ENST00000465560 MARCH6O60337 910 aa22.9■■□□□ 1.26
PTCD3-206ENST00000465560 PSAPP07602 524 aa22.9■■□□□ 1.26
PTCD3-206ENST00000465560 STAT5BP51692 787 aa22.9■■□□□ 1.26
PTCD3-206ENST00000465560 PPP2R5CQ13362 524 aa22.9■■□□□ 1.26
PTCD3-206ENST00000465560 ZNF174Q15697 407 aa22.9■■□□□ 1.26
PTCD3-206ENST00000465560 RILPL1Q5EBL4 403 aa22.9■■□□□ 1.26
PTCD3-206ENST00000465560 FAM160B1Q5W0V3 765 aa22.9■■□□□ 1.26
PTCD3-206ENST00000465560 BRAPQ7Z569 592 aa22.9■■□□□ 1.26
PTCD3-206ENST00000465560 MTMR9Q96QG7 549 aa22.9■■□□□ 1.26
PTCD3-206ENST00000465560 DISC1Q9NRI5 854 aa22.9■■□□□ 1.26
PTCD3-206ENST00000465560 TRMT13Q9NUP7 481 aaKnown RBP22.9■■□□□ 1.26
PTCD3-206ENST00000465560 SAMM50Q9Y512 469 aa22.9■■□□□ 1.26
PTCD3-206ENST00000465560 STX6O43752 255 aa22.89■■□□□ 1.25
PTCD3-206ENST00000465560 SMIM10L2AP0DMW4 78 aa22.89■■□□□ 1.25
PTCD3-206ENST00000465560 SMIM10L2BP0DMW5 78 aa22.89■■□□□ 1.25
PTCD3-206ENST00000465560 MARK3P27448 753 aa22.89■■□□□ 1.25
PTCD3-206ENST00000465560 SLC26A2P50443 739 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms