RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 ADCY6O43306 1168 aa19.03■□□□□ 0.64
EXOSC3-203ENST00000465229 PTGS1P23219 599 aa19.03■□□□□ 0.64
EXOSC3-203ENST00000465229 PDIA5Q14554 519 aa19.03■□□□□ 0.64
EXOSC3-203ENST00000465229 DUSP28Q4G0W2 176 aa19.03■□□□□ 0.64
EXOSC3-203ENST00000465229 CELF3Q5SZQ8 465 aaKnown RBP19.03■□□□□ 0.64
EXOSC3-203ENST00000465229 GJC2Q5T442 439 aaPredicted RBP19.03■□□□□ 0.64
EXOSC3-203ENST00000465229 CYFIP1Q7L576 1253 aa19.03■□□□□ 0.64
EXOSC3-203ENST00000465229 IGSF22Q8N9C0 903 aa19.03■□□□□ 0.64
EXOSC3-203ENST00000465229 GIMAP8Q8ND71 665 aaPredicted RBP19.03■□□□□ 0.64
EXOSC3-203ENST00000465229 SDF4Q9BRK5 362 aa19.03■□□□□ 0.64
EXOSC3-203ENST00000465229 CSRNP2Q9H175 543 aa19.03■□□□□ 0.64
EXOSC3-203ENST00000465229 GOLPH3LQ9H4A5 285 aa19.03■□□□□ 0.64
EXOSC3-203ENST00000465229 SORBS3O60504 671 aa19.02■□□□□ 0.64
EXOSC3-203ENST00000465229 KINO60870 393 aaKnown RBP19.02■□□□□ 0.64
EXOSC3-203ENST00000465229 CUTAO60888 179 aa19.02■□□□□ 0.64
EXOSC3-203ENST00000465229 GGPS1O95749 300 aa19.02■□□□□ 0.64
EXOSC3-203ENST00000465229 INHAP05111 366 aa19.02■□□□□ 0.64
EXOSC3-203ENST00000465229 CMA1P23946 247 aa19.02■□□□□ 0.64
EXOSC3-203ENST00000465229 TNFAIP2Q03169 654 aa19.02■□□□□ 0.64
EXOSC3-203ENST00000465229 TYRO3Q06418 890 aa19.02■□□□□ 0.64
EXOSC3-203ENST00000465229 PPP2R5CQ13362 524 aa19.02■□□□□ 0.64
EXOSC3-203ENST00000465229 CAMK4Q16566 473 aa19.02■□□□□ 0.64
EXOSC3-203ENST00000465229 TMEM266Q2M3C6 531 aa19.02■□□□□ 0.64
EXOSC3-203ENST00000465229 FMR1NBQ8N0W7 255 aaPredicted RBP19.02■□□□□ 0.64
EXOSC3-203ENST00000465229 UNC45AQ9H3U1 944 aa19.02■□□□□ 0.64
EXOSC3-203ENST00000465229 FAM184BQ9ULE4 1060 aa19.02■□□□□ 0.64
EXOSC3-203ENST00000465229 TELO2Q9Y4R8 837 aa19.02■□□□□ 0.64
EXOSC3-203ENST00000465229 POTEMA6NI47 508 aa19.01■□□□□ 0.63
EXOSC3-203ENST00000465229 FARP2O94887 1054 aaPredicted RBP19.01■□□□□ 0.63
EXOSC3-203ENST00000465229 CCNE2O96020 404 aa19.01■□□□□ 0.63
EXOSC3-203ENST00000465229 LONP1P36776 959 aaKnown RBP19.01■□□□□ 0.63
EXOSC3-203ENST00000465229 SPECC1Q5M775 1068 aa19.01■□□□□ 0.63
EXOSC3-203ENST00000465229 METTL7BQ6UX53 244 aa19.01■□□□□ 0.63
EXOSC3-203ENST00000465229 ZNF579Q8NAF0 562 aaKnown RBP19.01■□□□□ 0.63
EXOSC3-203ENST00000465229 SH3TC2Q8TF17 1288 aa19.01■□□□□ 0.63
EXOSC3-203ENST00000465229 MLXIPQ9HAP2 919 aa19.01■□□□□ 0.63
EXOSC3-203ENST00000465229 JPH1Q9HDC5 661 aaPredicted RBP19.01■□□□□ 0.63
EXOSC3-203ENST00000465229 SLC9A2Q9UBY0 812 aa19.01■□□□□ 0.63
EXOSC3-203ENST00000465229 GNEQ9Y223 722 aaKnown RBP19.01■□□□□ 0.63
EXOSC3-203ENST00000465229 FAM237AA0A1B0GTK4 181 aa19■□□□□ 0.63
EXOSC3-203ENST00000465229 EML1O00423 815 aa19■□□□□ 0.63
EXOSC3-203ENST00000465229 CCND3P30281 292 aaPredicted RBP19■□□□□ 0.63
EXOSC3-203ENST00000465229 CDC25AP30304 524 aa19■□□□□ 0.63
EXOSC3-203ENST00000465229 ARHGAP1Q07960 439 aa19■□□□□ 0.63
EXOSC3-203ENST00000465229 SHC4Q6S5L8 630 aa19■□□□□ 0.63
EXOSC3-203ENST00000465229 USP49Q70CQ1 688 aa19■□□□□ 0.63
EXOSC3-203ENST00000465229 DHX37Q8IY37 1157 aaKnown RBP19■□□□□ 0.63
EXOSC3-203ENST00000465229 FAM200AQ8TCP9 573 aa19■□□□□ 0.63
EXOSC3-203ENST00000465229 LRWD1Q9UFC0 647 aa19■□□□□ 0.63
EXOSC3-203ENST00000465229 POTEFA5A3E0 1075 aa19■□□□□ 0.63
EXOSC3-203ENST00000465229 PP2D1A8MPX8 630 aa19■□□□□ 0.63
EXOSC3-203ENST00000465229 NKRFO15226 690 aaKnown RBP eCLIP19■□□□□ 0.63
EXOSC3-203ENST00000465229 SEPT4O43236 478 aa19■□□□□ 0.63
EXOSC3-203ENST00000465229 CHMP2AO43633 222 aa19■□□□□ 0.63
EXOSC3-203ENST00000465229 GH1P01241 217 aa19■□□□□ 0.63
EXOSC3-203ENST00000465229 AKR1A1P14550 325 aa19■□□□□ 0.63
EXOSC3-203ENST00000465229 CNGA1P29973 690 aa19■□□□□ 0.63
EXOSC3-203ENST00000465229 KRT76Q01546 638 aa19■□□□□ 0.63
EXOSC3-203ENST00000465229 ZNF746Q6NUN9 644 aaPredicted RBP19■□□□□ 0.63
EXOSC3-203ENST00000465229 SASS6Q6UVJ0 657 aa19■□□□□ 0.63
EXOSC3-203ENST00000465229 LENG1Q96BZ8 264 aaPredicted RBP19■□□□□ 0.63
EXOSC3-203ENST00000465229 AK8Q96MA6 479 aa19■□□□□ 0.63
EXOSC3-203ENST00000465229 RAB34Q9BZG1 259 aa19■□□□□ 0.63
EXOSC3-203ENST00000465229 SP4Q02446 784 aa18.99■□□□□ 0.63
EXOSC3-203ENST00000465229 LAMC2Q13753 1193 aa18.99■□□□□ 0.63
EXOSC3-203ENST00000465229 NCAPH2Q6IBW4 605 aa18.99■□□□□ 0.63
EXOSC3-203ENST00000465229 CKAP2LQ8IYA6 745 aa18.99■□□□□ 0.63
EXOSC3-203ENST00000465229 EMID1Q96A84 441 aaPredicted RBP18.99■□□□□ 0.63
EXOSC3-203ENST00000465229 EPSTI1Q96J88 318 aa18.99■□□□□ 0.63
EXOSC3-203ENST00000465229 ACTR2P61160 394 aa18.98■□□□□ 0.63
EXOSC3-203ENST00000465229 PKN2Q16513 984 aaKnown RBP18.98■□□□□ 0.63
EXOSC3-203ENST00000465229 HSDL1Q3SXM5 330 aa18.98■□□□□ 0.63
EXOSC3-203ENST00000465229 SLC9C1Q4G0N8 1177 aa18.98■□□□□ 0.63
EXOSC3-203ENST00000465229 FBXO46Q6PJ61 603 aaPredicted RBP18.98■□□□□ 0.63
EXOSC3-203ENST00000465229 SYMPKQ92797 1274 aaKnown RBP18.98■□□□□ 0.63
EXOSC3-203ENST00000465229 SPATA33Q96N06 139 aa18.98■□□□□ 0.63
EXOSC3-203ENST00000465229 MMTAG2Q9BU76 263 aaKnown RBP18.98■□□□□ 0.63
EXOSC3-203ENST00000465229 PRDM10Q9NQV6 1147 aa18.98■□□□□ 0.63
EXOSC3-203ENST00000465229 DISC1Q9NRI5 854 aa18.98■□□□□ 0.63
EXOSC3-203ENST00000465229 TCEAL9Q9UHQ7 104 aa18.98■□□□□ 0.63
EXOSC3-203ENST00000465229 DYNC1LI2O43237 492 aaPredicted RBP18.97■□□□□ 0.63
EXOSC3-203ENST00000465229 ATG7O95352 703 aa18.97■□□□□ 0.63
EXOSC3-203ENST00000465229 EPHA7Q15375 998 aa18.97■□□□□ 0.63
EXOSC3-203ENST00000465229 RESP18Q5W5W9 173 aa18.97■□□□□ 0.63
EXOSC3-203ENST00000465229 MIER3Q7Z3K6 550 aa18.97■□□□□ 0.63
EXOSC3-203ENST00000465229 TIGD1Q96MW7 591 aa18.97■□□□□ 0.63
EXOSC3-203ENST00000465229 Q9Y3F1 56 aa18.97■□□□□ 0.63
EXOSC3-203ENST00000465229 PCDHA10Q9Y5I2 948 aa18.97■□□□□ 0.63
EXOSC3-203ENST00000465229 BRCA2P51587 3418 aa18.97■□□□□ 0.63
EXOSC3-203ENST00000465229 GSTTP1A0A1W2PQM5 241 aa18.96■□□□□ 0.63
EXOSC3-203ENST00000465229 WDR64B1ANS9 1081 aa18.96■□□□□ 0.63
EXOSC3-203ENST00000465229 DUSP11O75319 330 aaKnown RBP18.96■□□□□ 0.63
EXOSC3-203ENST00000465229 SFNP31947 248 aa18.96■□□□□ 0.63
EXOSC3-203ENST00000465229 NDUFA8P51970 172 aa18.96■□□□□ 0.63
EXOSC3-203ENST00000465229 JAK3P52333 1124 aa18.96■□□□□ 0.63
EXOSC3-203ENST00000465229 ABHD15Q6UXT9 468 aa18.96■□□□□ 0.63
EXOSC3-203ENST00000465229 SMAP1Q8IYB5 467 aaPredicted RBP18.96■□□□□ 0.63
EXOSC3-203ENST00000465229 OR6J1Q8NGC5 347 aa18.96■□□□□ 0.63
EXOSC3-203ENST00000465229 AFG1LQ8WV93 481 aa18.96■□□□□ 0.63
EXOSC3-203ENST00000465229 SEPT1Q8WYJ6 367 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms