RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 FAM47CQ5HY64 1035 aa13.43□□□□□ -0.26
APTX-213ENST00000465003 PPP4R3AQ6IN85 833 aa13.43□□□□□ -0.26
APTX-213ENST00000465003 SLC5A5Q92911 643 aa13.43□□□□□ -0.26
APTX-213ENST00000465003 PCYT2Q99447 389 aa13.43□□□□□ -0.26
APTX-213ENST00000465003 C16orf70Q9BSU1 422 aa13.43□□□□□ -0.26
APTX-213ENST00000465003 KCNMB3Q9NPA1 279 aa13.43□□□□□ -0.26
APTX-213ENST00000465003 ATP11BQ9Y2G3 1177 aa13.43□□□□□ -0.26
APTX-213ENST00000465003 MOXD2PA6NHM9 499 aa13.43□□□□□ -0.26
APTX-213ENST00000465003 MAFGO15525 162 aa13.43□□□□□ -0.26
APTX-213ENST00000465003 TXKP42681 527 aa13.43□□□□□ -0.26
APTX-213ENST00000465003 RESTQ13127 1097 aa13.43□□□□□ -0.26
APTX-213ENST00000465003 BRDTQ58F21 947 aaPredicted RBP13.43□□□□□ -0.26
APTX-213ENST00000465003 SLC39A5Q6ZMH5 540 aa13.43□□□□□ -0.26
APTX-213ENST00000465003 ZBTB10Q96DT7 871 aa13.43□□□□□ -0.26
APTX-213ENST00000465003 SCN10AQ9Y5Y9 1956 aa13.42□□□□□ -0.26
APTX-213ENST00000465003 POTEMA6NI47 508 aa13.42□□□□□ -0.26
APTX-213ENST00000465003 EML1O00423 815 aa13.42□□□□□ -0.26
APTX-213ENST00000465003 ZEB2O60315 1214 aa13.42□□□□□ -0.26
APTX-213ENST00000465003 PSMD10O75832 226 aa13.42□□□□□ -0.26
APTX-213ENST00000465003 GCFC2P16383 781 aaKnown RBP13.42□□□□□ -0.26
APTX-213ENST00000465003 NKX3-2P78367 333 aa13.42□□□□□ -0.26
APTX-213ENST00000465003 ITGA7Q13683 1181 aa13.42□□□□□ -0.26
APTX-213ENST00000465003 KIAA0753Q2KHM9 967 aa13.42□□□□□ -0.26
APTX-213ENST00000465003 NBPF20Q3BBV1 942 aa13.42□□□□□ -0.26
APTX-213ENST00000465003 MOXD1Q6UVY6 613 aa13.42□□□□□ -0.26
APTX-213ENST00000465003 CCDC60Q8IWA6 550 aaPredicted RBP13.42□□□□□ -0.26
APTX-213ENST00000465003 GLG1Q92896 1179 aa13.42□□□□□ -0.26
APTX-213ENST00000465003 TSEN34Q9BSV6 310 aaKnown RBP13.42□□□□□ -0.26
APTX-213ENST00000465003 TEKT3Q9BXF9 490 aa13.42□□□□□ -0.26
APTX-213ENST00000465003 NOL7Q9UMY1 257 aaKnown RBP13.42□□□□□ -0.26
APTX-213ENST00000465003 NFASCO94856 1347 aa13.42□□□□□ -0.26
APTX-213ENST00000465003 BACH1O14867 736 aa13.41□□□□□ -0.26
APTX-213ENST00000465003 ZNF200P98182 395 aaPredicted RBP13.41□□□□□ -0.26
APTX-213ENST00000465003 HIC1Q14526 733 aa13.41□□□□□ -0.26
APTX-213ENST00000465003 UGCGQ16739 394 aa13.41□□□□□ -0.26
APTX-213ENST00000465003 NCAPH2Q6IBW4 605 aa13.41□□□□□ -0.26
APTX-213ENST00000465003 C7orf61Q8IZ16 206 aa13.41□□□□□ -0.26
APTX-213ENST00000465003 GIMAP8Q8ND71 665 aaPredicted RBP13.41□□□□□ -0.26
APTX-213ENST00000465003 SEPT1Q8WYJ6 367 aa13.41□□□□□ -0.26
APTX-213ENST00000465003 DPF3Q92784 378 aa13.41□□□□□ -0.26
APTX-213ENST00000465003 SH2D3AQ9BRG2 576 aa13.41□□□□□ -0.26
APTX-213ENST00000465003 MTG1Q9BT17 334 aaPredicted RBP13.41□□□□□ -0.26
APTX-213ENST00000465003 RNPEPQ9H4A4 650 aa13.41□□□□□ -0.26
APTX-213ENST00000465003 TRMT13Q9NUP7 481 aaKnown RBP13.41□□□□□ -0.26
APTX-213ENST00000465003 TCEAL9Q9UHQ7 104 aa13.41□□□□□ -0.26
APTX-213ENST00000465003 VAV3Q9UKW4 847 aa13.41□□□□□ -0.26
APTX-213ENST00000465003 WDR81Q562E7 1941 aa13.41□□□□□ -0.26
APTX-213ENST00000465003 ELP1O95163 1332 aa13.41□□□□□ -0.26
APTX-213ENST00000465003 TMEM150BA6NC51 233 aa13.41□□□□□ -0.26
APTX-213ENST00000465003 H3BRB1 525 aa13.41□□□□□ -0.26
APTX-213ENST00000465003 F2P00734 622 aa13.41□□□□□ -0.26
APTX-213ENST00000465003 SYN1P17600 705 aa13.41□□□□□ -0.26
APTX-213ENST00000465003 RTP1P59025 263 aa13.41□□□□□ -0.26
APTX-213ENST00000465003 PTGDRQ13258 359 aa13.41□□□□□ -0.26
APTX-213ENST00000465003 MFSD10Q14728 455 aa13.41□□□□□ -0.26
APTX-213ENST00000465003 SWSAP1Q6NVH7 229 aa13.41□□□□□ -0.26
APTX-213ENST00000465003 BANK1Q8NDB2 785 aa13.41□□□□□ -0.26
APTX-213ENST00000465003 TRPV6Q9H1D0 765 aa13.41□□□□□ -0.26
APTX-213ENST00000465003 TUT1Q9H6E5 874 aaKnown RBP13.41□□□□□ -0.26
APTX-213ENST00000465003 TTC12Q9H892 705 aaPredicted RBP13.41□□□□□ -0.26
APTX-213ENST00000465003 TBC1D22BQ9NU19 505 aa13.41□□□□□ -0.26
APTX-213ENST00000465003 POLR3EQ9NVU0 708 aa13.41□□□□□ -0.26
APTX-213ENST00000465003 TRIP12Q14669 1992 aaPredicted RBP13.4□□□□□ -0.26
APTX-213ENST00000465003 PPFIA4O75335 1185 aa13.4□□□□□ -0.26
APTX-213ENST00000465003 HOXD8P13378 290 aaPredicted RBP13.4□□□□□ -0.26
APTX-213ENST00000465003 ANP32AP39687 249 aaKnown RBP13.4□□□□□ -0.26
APTX-213ENST00000465003 TECP42680 631 aa13.4□□□□□ -0.26
APTX-213ENST00000465003 PSEN2P49810 448 aa13.4□□□□□ -0.26
APTX-213ENST00000465003 CYP4A11Q02928 519 aa13.4□□□□□ -0.26
APTX-213ENST00000465003 ABHD15Q6UXT9 468 aa13.4□□□□□ -0.26
APTX-213ENST00000465003 SH3RF1Q7Z6J0 888 aa13.4□□□□□ -0.26
APTX-213ENST00000465003 TRAPPC12Q8WVT3 735 aa13.4□□□□□ -0.26
APTX-213ENST00000465003 DISC1Q9NRI5 854 aa13.4□□□□□ -0.26
APTX-213ENST00000465003 HDAC6Q9UBN7 1215 aa13.4□□□□□ -0.26
APTX-213ENST00000465003 ZDHHC9Q9Y397 364 aa13.4□□□□□ -0.26
APTX-213ENST00000465003 RBM19Q9Y4C8 960 aaKnown RBP13.4□□□□□ -0.26
APTX-213ENST00000465003 CLIC4Q9Y696 253 aa13.4□□□□□ -0.26
APTX-213ENST00000465003 MYH15Q9Y2K3 1946 aa13.4□□□□□ -0.26
APTX-213ENST00000465003 A0A087WWV3 80 aa13.4□□□□□ -0.27
APTX-213ENST00000465003 A0A0U1RQG5 324 aaPredicted RBP13.4□□□□□ -0.27
APTX-213ENST00000465003 B4GALT4O60513 344 aa13.4□□□□□ -0.27
APTX-213ENST00000465003 OR52Z1P0C646 297 aa13.4□□□□□ -0.27
APTX-213ENST00000465003 SUPT20HL2P0C7V6 817 aa13.4□□□□□ -0.27
APTX-213ENST00000465003 IGBP1P78318 339 aa13.4□□□□□ -0.27
APTX-213ENST00000465003 TLE2Q04725 743 aa13.4□□□□□ -0.27
APTX-213ENST00000465003 SPIRE1Q08AE8 756 aa13.4□□□□□ -0.27
APTX-213ENST00000465003 MIER3Q7Z3K6 550 aa13.4□□□□□ -0.27
APTX-213ENST00000465003 MTMR9Q96QG7 549 aa13.4□□□□□ -0.27
APTX-213ENST00000465003 RIT2Q99578 217 aa13.4□□□□□ -0.27
APTX-213ENST00000465003 PRDM5Q9NQX1 630 aaPredicted RBP13.4□□□□□ -0.27
APTX-213ENST00000465003 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.4□□□□□ -0.27
APTX-213ENST00000465003 GABBR1Q9UBS5 961 aa13.4□□□□□ -0.27
APTX-213ENST00000465003 ZMYND8Q9ULU4 1186 aaPredicted RBP13.4□□□□□ -0.27
APTX-213ENST00000465003 PP2D1A8MPX8 630 aa13.39□□□□□ -0.27
APTX-213ENST00000465003 ARVCFO00192 962 aa13.39□□□□□ -0.27
APTX-213ENST00000465003 ZSCAN22P10073 491 aaPredicted RBP13.39□□□□□ -0.27
APTX-213ENST00000465003 CDC25AP30304 524 aa13.39□□□□□ -0.27
APTX-213ENST00000465003 KRT76Q01546 638 aa13.39□□□□□ -0.27
APTX-213ENST00000465003 IL17AQ16552 155 aa13.39□□□□□ -0.27
APTX-213ENST00000465003 RILPL1Q5EBL4 403 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms