RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 EVA1CP58658 441 aa5.05□□□□□ -1.6
HMGXB4-205ENST00000464480 EXOSC10Q01780 885 aaKnown RBP5.05□□□□□ -1.6
HMGXB4-205ENST00000464480 FAM50AQ14320 339 aaKnown RBP5.05□□□□□ -1.6
HMGXB4-205ENST00000464480 ATP13A4Q4VNC1 1196 aa5.05□□□□□ -1.6
HMGXB4-205ENST00000464480 FYB2Q5VWT5 728 aa5.05□□□□□ -1.6
HMGXB4-205ENST00000464480 RPTNQ6XPR3 784 aa5.05□□□□□ -1.6
HMGXB4-205ENST00000464480 KIAA1958Q8N8K9 716 aa5.05□□□□□ -1.6
HMGXB4-205ENST00000464480 SH3RF2Q8TEC5 729 aa5.05□□□□□ -1.6
HMGXB4-205ENST00000464480 TSPAN17Q96FV3 270 aa5.05□□□□□ -1.6
HMGXB4-205ENST00000464480 RXFP1Q9HBX9 757 aa5.05□□□□□ -1.6
HMGXB4-205ENST00000464480 EMC7Q9NPA0 242 aa5.05□□□□□ -1.6
HMGXB4-205ENST00000464480 KCNH7Q9NS40 1196 aa5.05□□□□□ -1.6
HMGXB4-205ENST00000464480 SLC5A4Q9NY91 659 aa5.05□□□□□ -1.6
HMGXB4-205ENST00000464480 TCRBV5S2A0A599 114 aa5.04□□□□□ -1.6
HMGXB4-205ENST00000464480 ZBTB48P10074 688 aaPredicted RBP5.04□□□□□ -1.6
HMGXB4-205ENST00000464480 YBX3P16989 372 aaKnown RBP eCLIP5.04□□□□□ -1.6
HMGXB4-205ENST00000464480 SDHBP21912 280 aa5.04□□□□□ -1.6
HMGXB4-205ENST00000464480 ID4P47928 161 aa5.04□□□□□ -1.6
HMGXB4-205ENST00000464480 EPHA5P54756 1037 aa5.04□□□□□ -1.6
HMGXB4-205ENST00000464480 FAPQ12884 760 aa5.04□□□□□ -1.6
HMGXB4-205ENST00000464480 TUSC3Q13454 348 aa5.04□□□□□ -1.6
HMGXB4-205ENST00000464480 PLEKHG6Q3KR16 790 aa5.04□□□□□ -1.6
HMGXB4-205ENST00000464480 PLEKHN1Q494U1 663 aaPredicted RBP5.04□□□□□ -1.6
HMGXB4-205ENST00000464480 CPZQ66K79 652 aa5.04□□□□□ -1.6
HMGXB4-205ENST00000464480 CREB3L3Q68CJ9 461 aa5.04□□□□□ -1.6
HMGXB4-205ENST00000464480 IQSEC1Q6DN90 963 aa5.04□□□□□ -1.6
HMGXB4-205ENST00000464480 CC2D1AQ6P1N0 951 aaPredicted RBP5.04□□□□□ -1.6
HMGXB4-205ENST00000464480 ZC3H14Q6PJT7 736 aaKnown RBP5.04□□□□□ -1.6
HMGXB4-205ENST00000464480 LHFPL2Q6ZUX7 228 aa5.04□□□□□ -1.6
HMGXB4-205ENST00000464480 TTLL11Q8NHH1 800 aa5.04□□□□□ -1.6
HMGXB4-205ENST00000464480 YIPF4Q9BSR8 244 aa5.04□□□□□ -1.6
HMGXB4-205ENST00000464480 PUS7LQ9H0K6 701 aaKnown RBP5.04□□□□□ -1.6
HMGXB4-205ENST00000464480 METTL14Q9HCE5 456 aaKnown RBP5.04□□□□□ -1.6
HMGXB4-205ENST00000464480 ACSS2Q9NR19 701 aa5.04□□□□□ -1.6
HMGXB4-205ENST00000464480 SPTLC3Q9NUV7 552 aa5.04□□□□□ -1.6
HMGXB4-205ENST00000464480 RIC8BQ9NVN3 520 aa5.04□□□□□ -1.6
HMGXB4-205ENST00000464480 SPO11Q9Y5K1 396 aa5.04□□□□□ -1.6
HMGXB4-205ENST00000464480 B3GALT1Q9Y5Z6 326 aa5.04□□□□□ -1.6
HMGXB4-205ENST00000464480 PRAMEF25A6NGN4 478 aa5.03□□□□□ -1.6
HMGXB4-205ENST00000464480 HRKO00198 91 aa5.03□□□□□ -1.6
HMGXB4-205ENST00000464480 LTFP02788 710 aa5.03□□□□□ -1.6
HMGXB4-205ENST00000464480 S100BP04271 92 aaPredicted RBP5.03□□□□□ -1.6
HMGXB4-205ENST00000464480 TAL1P17542 331 aaPredicted RBP5.03□□□□□ -1.6
HMGXB4-205ENST00000464480 PTPN1P18031 435 aaKnown RBP5.03□□□□□ -1.6
HMGXB4-205ENST00000464480 TXKP42681 527 aa5.03□□□□□ -1.6
HMGXB4-205ENST00000464480 DDB1Q16531 1140 aa5.03□□□□□ -1.6
HMGXB4-205ENST00000464480 RGL3Q3MIN7 710 aa5.03□□□□□ -1.6
HMGXB4-205ENST00000464480 BRDTQ58F21 947 aaPredicted RBP5.03□□□□□ -1.6
HMGXB4-205ENST00000464480 BTBD8Q5XKL5 378 aa5.03□□□□□ -1.6
HMGXB4-205ENST00000464480 HDGFL2Q7Z4V5 671 aaPredicted RBP5.03□□□□□ -1.6
HMGXB4-205ENST00000464480 ZZZ3Q8IYH5 903 aa5.03□□□□□ -1.6
HMGXB4-205ENST00000464480 STAG1Q8WVM7 1258 aa5.03□□□□□ -1.6
HMGXB4-205ENST00000464480 PDGFDQ9GZP0 370 aaPredicted RBP5.03□□□□□ -1.6
HMGXB4-205ENST00000464480 H2AFY2Q9P0M6 372 aaPredicted RBP5.03□□□□□ -1.6
HMGXB4-205ENST00000464480 KLHL14Q9P2G3 628 aa5.03□□□□□ -1.6
HMGXB4-205ENST00000464480 PHLDB1Q86UU1 1377 aa5.03□□□□□ -1.6
HMGXB4-205ENST00000464480 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.02□□□□□ -1.61
HMGXB4-205ENST00000464480 BUB1BO60566 1050 aaPredicted RBP5.02□□□□□ -1.61
HMGXB4-205ENST00000464480 CYP17A1P05093 508 aa5.02□□□□□ -1.61
HMGXB4-205ENST00000464480 SLC9A1P19634 815 aa5.02□□□□□ -1.61
HMGXB4-205ENST00000464480 FNTBP49356 437 aa5.02□□□□□ -1.61
HMGXB4-205ENST00000464480 SESN3P58005 492 aa5.02□□□□□ -1.61
HMGXB4-205ENST00000464480 PRR5P85299 388 aa5.02□□□□□ -1.61
HMGXB4-205ENST00000464480 TMEM132BQ14DG7 1078 aa5.02□□□□□ -1.61
HMGXB4-205ENST00000464480 PAN2Q504Q3 1202 aaKnown RBP5.02□□□□□ -1.61
HMGXB4-205ENST00000464480 GPR158Q5T848 1215 aa5.02□□□□□ -1.61
HMGXB4-205ENST00000464480 FSTL4Q6MZW2 842 aa5.02□□□□□ -1.61
HMGXB4-205ENST00000464480 MPZL3Q6UWV2 235 aa5.02□□□□□ -1.61
HMGXB4-205ENST00000464480 TMC6Q7Z403 805 aa5.02□□□□□ -1.61
HMGXB4-205ENST00000464480 AMIGO3Q86WK7 504 aa5.02□□□□□ -1.61
HMGXB4-205ENST00000464480 MIB1Q86YT6 1006 aa5.02□□□□□ -1.61
HMGXB4-205ENST00000464480 FAM126BQ8IXS8 530 aa5.02□□□□□ -1.61
HMGXB4-205ENST00000464480 RBM12BQ8IXT5 1001 aaKnown RBP5.02□□□□□ -1.61
HMGXB4-205ENST00000464480 ALG3Q92685 438 aa5.02□□□□□ -1.61
HMGXB4-205ENST00000464480 DLG3Q92796 817 aa5.02□□□□□ -1.61
HMGXB4-205ENST00000464480 SLC5A5Q92911 643 aa5.02□□□□□ -1.61
HMGXB4-205ENST00000464480 MTMR8Q96EF0 704 aa5.02□□□□□ -1.61
HMGXB4-205ENST00000464480 DDX11Q96FC9 970 aa5.02□□□□□ -1.61
HMGXB4-205ENST00000464480 IRF2BPLQ9H1B7 796 aa5.02□□□□□ -1.61
HMGXB4-205ENST00000464480 TOMM22Q9NS69 142 aa5.02□□□□□ -1.61
HMGXB4-205ENST00000464480 DTLQ9NZJ0 730 aa5.02□□□□□ -1.61
HMGXB4-205ENST00000464480 TELO2Q9Y4R8 837 aa5.02□□□□□ -1.61
HMGXB4-205ENST00000464480 FOXP2O15409 715 aa5.01□□□□□ -1.61
HMGXB4-205ENST00000464480 KATNA1O75449 491 aa5.01□□□□□ -1.61
HMGXB4-205ENST00000464480 PAPLNO95428 1278 aa5.01□□□□□ -1.61
HMGXB4-205ENST00000464480 FAHP16930 419 aa5.01□□□□□ -1.61
HMGXB4-205ENST00000464480 JUNBP17275 347 aaPredicted RBP5.01□□□□□ -1.61
HMGXB4-205ENST00000464480 SDHAP31040 664 aa5.01□□□□□ -1.61
HMGXB4-205ENST00000464480 LSP1P33241 339 aa5.01□□□□□ -1.61
HMGXB4-205ENST00000464480 HERVK_113P62684 666 aa5.01□□□□□ -1.61
HMGXB4-205ENST00000464480 YBX1P67809 324 aaKnown RBP5.01□□□□□ -1.61
HMGXB4-205ENST00000464480 PHC1P78364 1004 aa5.01□□□□□ -1.61
HMGXB4-205ENST00000464480 GRIN1Q05586 938 aa5.01□□□□□ -1.61
HMGXB4-205ENST00000464480 ITKQ08881 620 aa5.01□□□□□ -1.61
HMGXB4-205ENST00000464480 ETV3LQ6ZN32 361 aa5.01□□□□□ -1.61
HMGXB4-205ENST00000464480 ARRDC4Q8NCT1 418 aa5.01□□□□□ -1.61
HMGXB4-205ENST00000464480 COG1Q8WTW3 980 aa5.01□□□□□ -1.61
HMGXB4-205ENST00000464480 CLEC4DQ8WXI8 215 aa5.01□□□□□ -1.61
HMGXB4-205ENST00000464480 FAM168AQ92567 244 aa5.01□□□□□ -1.61
HMGXB4-205ENST00000464480 ELF4Q99607 663 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms