RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 HHIPL2Q6UWX4 724 aa5.89□□□□□ -1.47
CLK1-208ENST00000464454 NIM1KQ8IY84 436 aa5.89□□□□□ -1.47
CLK1-208ENST00000464454 CISD2Q8N5K1 135 aaKnown RBP5.89□□□□□ -1.47
CLK1-208ENST00000464454 TTLL6Q8N841 843 aa5.89□□□□□ -1.47
CLK1-208ENST00000464454 IGSF22Q8N9C0 903 aa5.89□□□□□ -1.47
CLK1-208ENST00000464454 WRNIP1Q96S55 665 aa5.89□□□□□ -1.47
CLK1-208ENST00000464454 EPB41L4AQ9HCS5 686 aaPredicted RBP5.89□□□□□ -1.47
CLK1-208ENST00000464454 TNPO3Q9Y5L0 923 aaKnown RBP5.89□□□□□ -1.47
CLK1-208ENST00000464454 TCRBV5S4A2TA0A5A2 114 aa5.88□□□□□ -1.47
CLK1-208ENST00000464454 MAN2B1O00754 1011 aa5.88□□□□□ -1.47
CLK1-208ENST00000464454 LRG1P02750 347 aa5.88□□□□□ -1.47
CLK1-208ENST00000464454 AMY2AP04746 511 aa5.88□□□□□ -1.47
CLK1-208ENST00000464454 FAHP16930 419 aa5.88□□□□□ -1.47
CLK1-208ENST00000464454 AMY2BP19961 511 aa5.88□□□□□ -1.47
CLK1-208ENST00000464454 JAM2P57087 298 aa5.88□□□□□ -1.47
CLK1-208ENST00000464454 HTRA3P83110 453 aa5.88□□□□□ -1.47
CLK1-208ENST00000464454 GRIN1Q05586 938 aa5.88□□□□□ -1.47
CLK1-208ENST00000464454 CR1LQ2VPA4 569 aa5.88□□□□□ -1.47
CLK1-208ENST00000464454 PAN2Q504Q3 1202 aaKnown RBP5.88□□□□□ -1.47
CLK1-208ENST00000464454 TMEM177Q53S58 311 aa5.88□□□□□ -1.47
CLK1-208ENST00000464454 DALRD3Q5D0E6 543 aaKnown RBP5.88□□□□□ -1.47
CLK1-208ENST00000464454 OSTM1Q86WC4 334 aa5.88□□□□□ -1.47
CLK1-208ENST00000464454 PTRH1Q86Y79 214 aaKnown RBP5.88□□□□□ -1.47
CLK1-208ENST00000464454 CILP2Q8IUL8 1156 aa5.88□□□□□ -1.47
CLK1-208ENST00000464454 LINC00482Q8N8I6 264 aa5.88□□□□□ -1.47
CLK1-208ENST00000464454 SH3RF2Q8TEC5 729 aa5.88□□□□□ -1.47
CLK1-208ENST00000464454 FNIP1Q8TF40 1166 aa5.88□□□□□ -1.47
CLK1-208ENST00000464454 CLEC4DQ8WXI8 215 aa5.88□□□□□ -1.47
CLK1-208ENST00000464454 DACT3Q96B18 629 aaPredicted RBP5.88□□□□□ -1.47
CLK1-208ENST00000464454 MFSD3Q96ES6 412 aa5.88□□□□□ -1.47
CLK1-208ENST00000464454 TMEM209Q96SK2 561 aa5.88□□□□□ -1.47
CLK1-208ENST00000464454 CD244Q9BZW8 370 aa5.88□□□□□ -1.47
CLK1-208ENST00000464454 IRF2BPLQ9H1B7 796 aa5.88□□□□□ -1.47
CLK1-208ENST00000464454 CABP5Q9NP86 173 aa5.88□□□□□ -1.47
CLK1-208ENST00000464454 SAMD15Q9P1V8 674 aa5.88□□□□□ -1.47
CLK1-208ENST00000464454 SLC12A8A0AV02 714 aa5.87□□□□□ -1.47
CLK1-208ENST00000464454 CLASP2O75122 1294 aaKnown RBP5.87□□□□□ -1.47
CLK1-208ENST00000464454 CYP7B1O75881 506 aa5.87□□□□□ -1.47
CLK1-208ENST00000464454 KCNA6P17658 529 aa5.87□□□□□ -1.47
CLK1-208ENST00000464454 PTPN1P18031 435 aaKnown RBP5.87□□□□□ -1.47
CLK1-208ENST00000464454 SDSP20132 328 aa5.87□□□□□ -1.47
CLK1-208ENST00000464454 CFPP27918 469 aa5.87□□□□□ -1.47
CLK1-208ENST00000464454 ARHGAP44Q17R89 818 aa5.87□□□□□ -1.47
CLK1-208ENST00000464454 C21orf62-AS1Q17RA5 79 aa5.87□□□□□ -1.47
CLK1-208ENST00000464454 BTBD8Q5XKL5 378 aa5.87□□□□□ -1.47
CLK1-208ENST00000464454 VASNQ6EMK4 673 aa5.87□□□□□ -1.47
CLK1-208ENST00000464454 ABHD17CQ6PCB6 329 aa5.87□□□□□ -1.47
CLK1-208ENST00000464454 OVCH1Q7RTY7 1134 aa5.87□□□□□ -1.47
CLK1-208ENST00000464454 FAM26EQ8N5C1 309 aa5.87□□□□□ -1.47
CLK1-208ENST00000464454 C2orf69Q8N8R5 385 aa5.87□□□□□ -1.47
CLK1-208ENST00000464454 KYQ8NBH2 561 aa5.87□□□□□ -1.47
CLK1-208ENST00000464454 ZBTB8AQ96BR9 441 aa5.87□□□□□ -1.47
CLK1-208ENST00000464454 PUS7Q96PZ0 661 aaKnown RBP5.87□□□□□ -1.47
CLK1-208ENST00000464454 GORASP1Q9BQQ3 440 aa5.87□□□□□ -1.47
CLK1-208ENST00000464454 C11orf84Q9BUA3 381 aaPredicted RBP5.87□□□□□ -1.47
CLK1-208ENST00000464454 SPC25Q9HBM1 224 aa5.87□□□□□ -1.47
CLK1-208ENST00000464454 SMURF1Q9HCE7 757 aa5.87□□□□□ -1.47
CLK1-208ENST00000464454 RIC8BQ9NVN3 520 aa5.87□□□□□ -1.47
CLK1-208ENST00000464454 DNAJC6O75061 913 aa5.86□□□□□ -1.47
CLK1-208ENST00000464454 HIP1RO75146 1068 aa5.86□□□□□ -1.47
CLK1-208ENST00000464454 LTFP02788 710 aa5.86□□□□□ -1.47
CLK1-208ENST00000464454 PLA2G1BP04054 148 aaKnown RBP5.86□□□□□ -1.47
CLK1-208ENST00000464454 JMJD7P0C870 316 aa5.86□□□□□ -1.47
CLK1-208ENST00000464454 ITGA1P56199 1179 aa5.86□□□□□ -1.47
CLK1-208ENST00000464454 ZNF460Q14592 562 aa5.86□□□□□ -1.47
CLK1-208ENST00000464454 CFAP100Q494V2 611 aa5.86□□□□□ -1.47
CLK1-208ENST00000464454 TTLL7Q6ZT98 887 aa5.86□□□□□ -1.47
CLK1-208ENST00000464454 FILIP1Q7Z7B0 1213 aa5.86□□□□□ -1.47
CLK1-208ENST00000464454 SAPCD2Q86UD0 394 aa5.86□□□□□ -1.47
CLK1-208ENST00000464454 SIAH1Q8IUQ4 282 aa5.86□□□□□ -1.47
CLK1-208ENST00000464454 RBM12BQ8IXT5 1001 aaKnown RBP5.86□□□□□ -1.47
CLK1-208ENST00000464454 PPM1KQ8N3J5 372 aa5.86□□□□□ -1.47
CLK1-208ENST00000464454 CHST14Q8NCH0 376 aa5.86□□□□□ -1.47
CLK1-208ENST00000464454 WNK4Q96J92 1243 aa5.86□□□□□ -1.47
CLK1-208ENST00000464454 CLIC6Q96NY7 704 aa5.86□□□□□ -1.47
CLK1-208ENST00000464454 BOCQ9BWV1 1114 aa5.86□□□□□ -1.47
CLK1-208ENST00000464454 TELO2Q9Y4R8 837 aa5.86□□□□□ -1.47
CLK1-208ENST00000464454 M0R2C6 588 aa5.85□□□□□ -1.47
CLK1-208ENST00000464454 GLRX3O76003 335 aaKnown RBP5.85□□□□□ -1.47
CLK1-208ENST00000464454 ENO2P09104 434 aaPredicted RBP5.85□□□□□ -1.47
CLK1-208ENST00000464454 POU3F2P20265 443 aaPredicted RBP5.85□□□□□ -1.47
CLK1-208ENST00000464454 PIK3R6Q5UE93 754 aa5.85□□□□□ -1.47
CLK1-208ENST00000464454 LRRTM3Q86VH5 581 aa5.85□□□□□ -1.47
CLK1-208ENST00000464454 C1QL4Q86Z23 238 aa5.85□□□□□ -1.47
CLK1-208ENST00000464454 NOSTRINQ8IVI9 506 aa5.85□□□□□ -1.47
CLK1-208ENST00000464454 DHX37Q8IY37 1157 aaKnown RBP5.85□□□□□ -1.47
CLK1-208ENST00000464454 AHI1Q8N157 1196 aa5.85□□□□□ -1.47
CLK1-208ENST00000464454 LINC01356Q8N9X3 169 aa5.85□□□□□ -1.47
CLK1-208ENST00000464454 DLL4Q9NR61 685 aa5.85□□□□□ -1.47
CLK1-208ENST00000464454 IFT57Q9NWB7 429 aa5.85□□□□□ -1.47
CLK1-208ENST00000464454 NTMQ9P121 344 aa5.85□□□□□ -1.47
CLK1-208ENST00000464454 SH3D21A4FU49 640 aa5.84□□□□□ -1.47
CLK1-208ENST00000464454 PRAMEF25A6NGN4 478 aa5.84□□□□□ -1.47
CLK1-208ENST00000464454 ZSCAN22P10073 491 aaPredicted RBP5.84□□□□□ -1.47
CLK1-208ENST00000464454 IBSPP21815 317 aaPredicted RBP5.84□□□□□ -1.47
CLK1-208ENST00000464454 THBS2P35442 1172 aa5.84□□□□□ -1.47
CLK1-208ENST00000464454 MASP1P48740 699 aa5.84□□□□□ -1.47
CLK1-208ENST00000464454 NEK4P51957 841 aa5.84□□□□□ -1.47
CLK1-208ENST00000464454 HERVK_113P62684 666 aa5.84□□□□□ -1.47
CLK1-208ENST00000464454 VWA3BQ502W6 1294 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms