RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 RTEL1Q9NZ71 1219 aa6.62□□□□□ -1.35
USP25-207ENST00000464435 PLA2G2DQ9UNK4 145 aa6.62□□□□□ -1.35
USP25-207ENST00000464435 MAPRE3Q9UPY8 281 aa6.62□□□□□ -1.35
USP25-207ENST00000464435 ARVCFO00192 962 aa6.61□□□□□ -1.35
USP25-207ENST00000464435 HGSO14964 777 aaPredicted RBP6.61□□□□□ -1.35
USP25-207ENST00000464435 MAFKO60675 156 aa6.61□□□□□ -1.35
USP25-207ENST00000464435 JMJD7P0C870 316 aa6.61□□□□□ -1.35
USP25-207ENST00000464435 KCNA6P17658 529 aa6.61□□□□□ -1.35
USP25-207ENST00000464435 SOX5P35711 763 aa6.61□□□□□ -1.35
USP25-207ENST00000464435 KCNC1P48547 511 aa6.61□□□□□ -1.35
USP25-207ENST00000464435 EMC4Q5J8M3 183 aa6.61□□□□□ -1.35
USP25-207ENST00000464435 CYP4F22Q6NT55 531 aa6.61□□□□□ -1.35
USP25-207ENST00000464435 LBX2Q6XYB7 198 aa6.61□□□□□ -1.35
USP25-207ENST00000464435 LIPIQ6XZB0 460 aa6.61□□□□□ -1.35
USP25-207ENST00000464435 FAM126BQ8IXS8 530 aa6.61□□□□□ -1.35
USP25-207ENST00000464435 IFNL3Q8IZI9 196 aa6.61□□□□□ -1.35
USP25-207ENST00000464435 PPM1KQ8N3J5 372 aa6.61□□□□□ -1.35
USP25-207ENST00000464435 AFAP1L2Q8N4X5 818 aa6.61□□□□□ -1.35
USP25-207ENST00000464435 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.61□□□□□ -1.35
USP25-207ENST00000464435 PHOSPHO1Q8TCT1 267 aa6.61□□□□□ -1.35
USP25-207ENST00000464435 LEO1Q8WVC0 666 aaPredicted RBP6.61□□□□□ -1.35
USP25-207ENST00000464435 MTFR1LQ9H019 292 aa6.61□□□□□ -1.35
USP25-207ENST00000464435 XYLT2Q9H1B5 865 aa6.61□□□□□ -1.35
USP25-207ENST00000464435 EPB41L1Q9H4G0 881 aa6.61□□□□□ -1.35
USP25-207ENST00000464435 PCDHA2Q9Y5H9 948 aa6.61□□□□□ -1.35
USP25-207ENST00000464435 RAB11FIP3O75154 756 aa6.6□□□□□ -1.35
USP25-207ENST00000464435 DGKIO75912 1065 aa6.6□□□□□ -1.35
USP25-207ENST00000464435 POU3F2P20265 443 aaPredicted RBP6.6□□□□□ -1.35
USP25-207ENST00000464435 FPR2P25090 351 aa6.6□□□□□ -1.35
USP25-207ENST00000464435 MC3RP41968 323 aa6.6□□□□□ -1.35
USP25-207ENST00000464435 NEK4P51957 841 aa6.6□□□□□ -1.35
USP25-207ENST00000464435 SLURP1P55000 103 aa6.6□□□□□ -1.35
USP25-207ENST00000464435 EVA1CP58658 441 aa6.6□□□□□ -1.35
USP25-207ENST00000464435 SKOR2Q2VWA4 1001 aaPredicted RBP6.6□□□□□ -1.35
USP25-207ENST00000464435 CT47A1Q5JQC4 288 aaPredicted RBP6.6□□□□□ -1.35
USP25-207ENST00000464435 PIK3R6Q5UE93 754 aa6.6□□□□□ -1.35
USP25-207ENST00000464435 ERICH6BQ5W0A0 696 aa6.6□□□□□ -1.35
USP25-207ENST00000464435 ZCCHC8Q6NZY4 707 aaKnown RBP6.6□□□□□ -1.35
USP25-207ENST00000464435 TTLL7Q6ZT98 887 aa6.6□□□□□ -1.35
USP25-207ENST00000464435 FRMD5Q7Z6J6 570 aa6.6□□□□□ -1.35
USP25-207ENST00000464435 MILR1Q7Z6M3 343 aa6.6□□□□□ -1.35
USP25-207ENST00000464435 STAG1Q8WVM7 1258 aa6.6□□□□□ -1.35
USP25-207ENST00000464435 CHAMP1Q96JM3 812 aa6.6□□□□□ -1.35
USP25-207ENST00000464435 CLDND1Q9NY35 253 aa6.6□□□□□ -1.35
USP25-207ENST00000464435 PALD1Q9ULE6 856 aa6.6□□□□□ -1.35
USP25-207ENST00000464435 SIT1Q9Y3P8 196 aa6.6□□□□□ -1.35
USP25-207ENST00000464435 ADAMTS20P59510 1910 aa6.59□□□□□ -1.35
USP25-207ENST00000464435 TADA3O75528 432 aa6.59□□□□□ -1.35
USP25-207ENST00000464435 GLRX3O76003 335 aaKnown RBP6.59□□□□□ -1.35
USP25-207ENST00000464435 SRGAP2CP0DJJ0 459 aa6.59□□□□□ -1.35
USP25-207ENST00000464435 VMACQ2NL98 169 aa6.59□□□□□ -1.35
USP25-207ENST00000464435 DDX42Q86XP3 938 aaKnown RBP eCLIP6.59□□□□□ -1.35
USP25-207ENST00000464435 TTLL6Q8N841 843 aa6.59□□□□□ -1.35
USP25-207ENST00000464435 PRPF38AQ8NAV1 312 aaKnown RBP6.59□□□□□ -1.35
USP25-207ENST00000464435 PCDH19Q8TAB3 1148 aa6.59□□□□□ -1.35
USP25-207ENST00000464435 RELTQ969Z4 430 aa6.59□□□□□ -1.35
USP25-207ENST00000464435 DDX11Q96FC9 970 aa6.59□□□□□ -1.35
USP25-207ENST00000464435 TEPSINQ96N21 525 aa6.59□□□□□ -1.35
USP25-207ENST00000464435 BCAS3Q9H6U6 928 aa6.59□□□□□ -1.35
USP25-207ENST00000464435 NTMQ9P121 344 aa6.59□□□□□ -1.35
USP25-207ENST00000464435 ATP8A1Q9Y2Q0 1164 aa6.59□□□□□ -1.35
USP25-207ENST00000464435 COQ6Q9Y2Z9 468 aa6.59□□□□□ -1.35
USP25-207ENST00000464435 KRIT1O00522 736 aa6.58□□□□□ -1.36
USP25-207ENST00000464435 C8BP07358 591 aa6.58□□□□□ -1.36
USP25-207ENST00000464435 NFKB2Q00653 900 aa6.58□□□□□ -1.36
USP25-207ENST00000464435 DLX2Q07687 328 aaPredicted RBP6.58□□□□□ -1.36
USP25-207ENST00000464435 NFIXQ14938 502 aa6.58□□□□□ -1.36
USP25-207ENST00000464435 KIZQ2M2Z5 673 aa6.58□□□□□ -1.36
USP25-207ENST00000464435 CFAP100Q494V2 611 aa6.58□□□□□ -1.36
USP25-207ENST00000464435 STEAP3Q658P3 488 aa6.58□□□□□ -1.36
USP25-207ENST00000464435 CDCA2Q69YH5 1023 aaPredicted RBP6.58□□□□□ -1.36
USP25-207ENST00000464435 ZC3H7AQ8IWR0 971 aaKnown RBP6.58□□□□□ -1.36
USP25-207ENST00000464435 IGSF22Q8N9C0 903 aa6.58□□□□□ -1.36
USP25-207ENST00000464435 KYQ8NBH2 561 aa6.58□□□□□ -1.36
USP25-207ENST00000464435 CXorf38Q8TB03 319 aa6.58□□□□□ -1.36
USP25-207ENST00000464435 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.58□□□□□ -1.36
USP25-207ENST00000464435 ALG1Q9BT22 464 aa6.58□□□□□ -1.36
USP25-207ENST00000464435 CDIP1Q9H305 208 aa6.58□□□□□ -1.36
USP25-207ENST00000464435 SMOC1Q9H4F8 434 aa6.58□□□□□ -1.36
USP25-207ENST00000464435 IPPKQ9H8X2 491 aa6.58□□□□□ -1.36
USP25-207ENST00000464435 HSPBP1Q9NZL4 362 aa6.58□□□□□ -1.36
USP25-207ENST00000464435 SAMD15Q9P1V8 674 aa6.58□□□□□ -1.36
USP25-207ENST00000464435 NUB1Q9Y5A7 615 aa6.58□□□□□ -1.36
USP25-207ENST00000464435 A0A0G2JLL6 359 aaPredicted RBP6.57□□□□□ -1.36
USP25-207ENST00000464435 OTOL1A6NHN0 477 aaPredicted RBP6.57□□□□□ -1.36
USP25-207ENST00000464435 SOD2P04179 222 aa6.57□□□□□ -1.36
USP25-207ENST00000464435 CKMP06732 381 aa6.57□□□□□ -1.36
USP25-207ENST00000464435 CDK11BP21127 795 aaKnown RBP6.57□□□□□ -1.36
USP25-207ENST00000464435 GRK2P25098 689 aa6.57□□□□□ -1.36
USP25-207ENST00000464435 GRK3P35626 688 aa6.57□□□□□ -1.36
USP25-207ENST00000464435 NKX3-2P78367 333 aa6.57□□□□□ -1.36
USP25-207ENST00000464435 STRN3Q13033 797 aa6.57□□□□□ -1.36
USP25-207ENST00000464435 PAK1Q13153 545 aa6.57□□□□□ -1.36
USP25-207ENST00000464435 LHFPL2Q6ZUX7 228 aa6.57□□□□□ -1.36
USP25-207ENST00000464435 TRIM48Q8IWZ4 208 aa6.57□□□□□ -1.36
USP25-207ENST00000464435 CARFQ8N187 725 aa6.57□□□□□ -1.36
USP25-207ENST00000464435 YIPF4Q9BSR8 244 aa6.57□□□□□ -1.36
USP25-207ENST00000464435 C11orf84Q9BUA3 381 aaPredicted RBP6.57□□□□□ -1.36
USP25-207ENST00000464435 DDX56Q9NY93 547 aaKnown RBP6.57□□□□□ -1.36
USP25-207ENST00000464435 PCDHB4Q9Y5E5 795 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms