RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 FOXP1Q9H334 677 aaPredicted RBP17.47■□□□□ 0.39
RAB11FIP3-208ENST00000464263 TUT1Q9H6E5 874 aaKnown RBP17.47■□□□□ 0.39
RAB11FIP3-208ENST00000464263 SMC3Q9UQE7 1217 aa17.47■□□□□ 0.39
RAB11FIP3-208ENST00000464263 LTBP2Q14767 1821 aa17.47■□□□□ 0.39
RAB11FIP3-208ENST00000464263 KIAA0355O15063 1070 aa17.46■□□□□ 0.39
RAB11FIP3-208ENST00000464263 TLR3O15455 904 aaKnown RBP17.46■□□□□ 0.39
RAB11FIP3-208ENST00000464263 B4GALT4O60513 344 aa17.46■□□□□ 0.39
RAB11FIP3-208ENST00000464263 UTP14CQ5TAP6 766 aaKnown RBP17.46■□□□□ 0.39
RAB11FIP3-208ENST00000464263 PCYT2Q99447 389 aa17.46■□□□□ 0.39
RAB11FIP3-208ENST00000464263 TMEM39AQ9NV64 488 aa17.46■□□□□ 0.39
RAB11FIP3-208ENST00000464263 PCDH10Q9P2E7 1040 aa17.46■□□□□ 0.39
RAB11FIP3-208ENST00000464263 HDAC6Q9UBN7 1215 aa17.46■□□□□ 0.39
RAB11FIP3-208ENST00000464263 DDX25Q9UHL0 483 aaKnown RBP17.46■□□□□ 0.39
RAB11FIP3-208ENST00000464263 KIF3AQ9Y496 699 aa17.46■□□□□ 0.39
RAB11FIP3-208ENST00000464263 MYH9P35579 1960 aaKnown RBP17.46■□□□□ 0.39
RAB11FIP3-208ENST00000464263 K7ELQ4 463 aaPredicted RBP17.45■□□□□ 0.38
RAB11FIP3-208ENST00000464263 DDX39AO00148 427 aaKnown RBP17.45■□□□□ 0.38
RAB11FIP3-208ENST00000464263 SLC37A4O43826 429 aa17.45■□□□□ 0.38
RAB11FIP3-208ENST00000464263 CCNT1O60563 726 aaKnown RBP17.45■□□□□ 0.38
RAB11FIP3-208ENST00000464263 LGR5O75473 907 aa17.45■□□□□ 0.38
RAB11FIP3-208ENST00000464263 GCFC2P16383 781 aaKnown RBP17.45■□□□□ 0.38
RAB11FIP3-208ENST00000464263 CHMP4BP1P59074 171 aa17.45■□□□□ 0.38
RAB11FIP3-208ENST00000464263 FAM47CQ5HY64 1035 aa17.45■□□□□ 0.38
RAB11FIP3-208ENST00000464263 ABHD15Q6UXT9 468 aa17.45■□□□□ 0.38
RAB11FIP3-208ENST00000464263 TRIM50Q86XT4 487 aa17.45■□□□□ 0.38
RAB11FIP3-208ENST00000464263 ETNPPLQ8TBG4 499 aa17.45■□□□□ 0.38
RAB11FIP3-208ENST00000464263 RIT2Q99578 217 aa17.45■□□□□ 0.38
RAB11FIP3-208ENST00000464263 NAP1L4Q99733 375 aaKnown RBP17.45■□□□□ 0.38
RAB11FIP3-208ENST00000464263 RNPEPQ9H4A4 650 aa17.45■□□□□ 0.38
RAB11FIP3-208ENST00000464263 PRDM5Q9NQX1 630 aaPredicted RBP17.45■□□□□ 0.38
RAB11FIP3-208ENST00000464263 TRMT13Q9NUP7 481 aaKnown RBP17.45■□□□□ 0.38
RAB11FIP3-208ENST00000464263 TBX21Q9UL17 535 aa17.45■□□□□ 0.38
RAB11FIP3-208ENST00000464263 IGKV6D-21A0A0A0MT36 114 aa17.44■□□□□ 0.38
RAB11FIP3-208ENST00000464263 WNT7AO00755 349 aa17.44■□□□□ 0.38
RAB11FIP3-208ENST00000464263 PSMD10O75832 226 aa17.44■□□□□ 0.38
RAB11FIP3-208ENST00000464263 ITGB8P26012 769 aa17.44■□□□□ 0.38
RAB11FIP3-208ENST00000464263 U2AF2P26368 475 aaKnown RBP eCLIP17.44■□□□□ 0.38
RAB11FIP3-208ENST00000464263 HIC1Q14526 733 aa17.44■□□□□ 0.38
RAB11FIP3-208ENST00000464263 GDF6Q6KF10 455 aaPredicted RBP17.44■□□□□ 0.38
RAB11FIP3-208ENST00000464263 ZNF746Q6NUN9 644 aaPredicted RBP17.44■□□□□ 0.38
RAB11FIP3-208ENST00000464263 C7orf31Q8N865 590 aa17.44■□□□□ 0.38
RAB11FIP3-208ENST00000464263 GJA10Q969M2 543 aa17.44■□□□□ 0.38
RAB11FIP3-208ENST00000464263 CTAGE1Q96RT6 745 aa17.44■□□□□ 0.38
RAB11FIP3-208ENST00000464263 SMARCAD1Q9H4L7 1026 aa17.44■□□□□ 0.38
RAB11FIP3-208ENST00000464263 PRKAG2Q9UGJ0 569 aa17.44■□□□□ 0.38
RAB11FIP3-208ENST00000464263 GTF2IRD1Q9UHL9 959 aa17.44■□□□□ 0.38
RAB11FIP3-208ENST00000464263 KIF28PB7ZC32 967 aa17.43■□□□□ 0.38
RAB11FIP3-208ENST00000464263 SUPT20HL2P0C7V6 817 aa17.43■□□□□ 0.38
RAB11FIP3-208ENST00000464263 HOXC8P31273 242 aa17.43■□□□□ 0.38
RAB11FIP3-208ENST00000464263 KRT76Q01546 638 aa17.43■□□□□ 0.38
RAB11FIP3-208ENST00000464263 B3GNT9Q6UX72 402 aa17.43■□□□□ 0.38
RAB11FIP3-208ENST00000464263 HAS1Q92839 578 aa17.43■□□□□ 0.38
RAB11FIP3-208ENST00000464263 INTS4Q96HW7 963 aaKnown RBP17.43■□□□□ 0.38
RAB11FIP3-208ENST00000464263 FAM20AQ96MK3 541 aa17.43■□□□□ 0.38
RAB11FIP3-208ENST00000464263 GDF15Q99988 308 aa17.43■□□□□ 0.38
RAB11FIP3-208ENST00000464263 KCNMB3Q9NPA1 279 aa17.43■□□□□ 0.38
RAB11FIP3-208ENST00000464263 ERAP1Q9NZ08 941 aa17.43■□□□□ 0.38
RAB11FIP3-208ENST00000464263 ZNF215Q9UL58 517 aaPredicted RBP17.43■□□□□ 0.38
RAB11FIP3-208ENST00000464263 CEP290O15078 2479 aa17.43■□□□□ 0.38
RAB11FIP3-208ENST00000464263 EMSYQ7Z589 1322 aa17.43■□□□□ 0.38
RAB11FIP3-208ENST00000464263 TBX3O15119 743 aa17.42■□□□□ 0.38
RAB11FIP3-208ENST00000464263 GAS7O60861 476 aa17.42■□□□□ 0.38
RAB11FIP3-208ENST00000464263 TIMP1P01033 207 aa17.42■□□□□ 0.38
RAB11FIP3-208ENST00000464263 MAGEA10P43363 369 aaPredicted RBP17.42■□□□□ 0.38
RAB11FIP3-208ENST00000464263 PTGISQ16647 500 aa17.42■□□□□ 0.38
RAB11FIP3-208ENST00000464263 LRCH2Q5VUJ6 765 aa17.42■□□□□ 0.38
RAB11FIP3-208ENST00000464263 LARP1BQ659C4 914 aaKnown RBP17.42■□□□□ 0.38
RAB11FIP3-208ENST00000464263 PLPPR4Q7Z2D5 763 aa17.42■□□□□ 0.38
RAB11FIP3-208ENST00000464263 NOSTRINQ8IVI9 506 aa17.42■□□□□ 0.38
RAB11FIP3-208ENST00000464263 GLG1Q92896 1179 aa17.42■□□□□ 0.38
RAB11FIP3-208ENST00000464263 TEKT3Q9BXF9 490 aa17.42■□□□□ 0.38
RAB11FIP3-208ENST00000464263 SMIM10L2AP0DMW4 78 aa17.41■□□□□ 0.38
RAB11FIP3-208ENST00000464263 SMIM10L2BP0DMW5 78 aa17.41■□□□□ 0.38
RAB11FIP3-208ENST00000464263 CYP2C9P11712 490 aa17.41■□□□□ 0.38
RAB11FIP3-208ENST00000464263 RAG1P15918 1043 aa17.41■□□□□ 0.38
RAB11FIP3-208ENST00000464263 STAT5BP51692 787 aa17.41■□□□□ 0.38
RAB11FIP3-208ENST00000464263 ZNF200P98182 395 aaPredicted RBP17.41■□□□□ 0.38
RAB11FIP3-208ENST00000464263 SWSAP1Q6NVH7 229 aa17.41■□□□□ 0.38
RAB11FIP3-208ENST00000464263 MIS18BP1Q6P0N0 1132 aa17.41■□□□□ 0.38
RAB11FIP3-208ENST00000464263 POTEDQ86YR6 584 aa17.41■□□□□ 0.38
RAB11FIP3-208ENST00000464263 SMAP1Q8IYB5 467 aaPredicted RBP17.41■□□□□ 0.38
RAB11FIP3-208ENST00000464263 AFAP1L1Q8TED9 768 aa17.41■□□□□ 0.38
RAB11FIP3-208ENST00000464263 BADQ92934 168 aa17.41■□□□□ 0.38
RAB11FIP3-208ENST00000464263 PRO3102Q9H379 93 aa17.41■□□□□ 0.38
RAB11FIP3-208ENST00000464263 UNC45AQ9H3U1 944 aa17.41■□□□□ 0.38
RAB11FIP3-208ENST00000464263 AZI2Q9H6S1 392 aa17.41■□□□□ 0.38
RAB11FIP3-208ENST00000464263 PCDHA10Q9Y5I2 948 aa17.41■□□□□ 0.38
RAB11FIP3-208ENST00000464263 MARK3P27448 753 aa17.4■□□□□ 0.38
RAB11FIP3-208ENST00000464263 ADAM17P78536 824 aa17.4■□□□□ 0.38
RAB11FIP3-208ENST00000464263 MDM2Q00987 491 aaPredicted RBP17.4■□□□□ 0.38
RAB11FIP3-208ENST00000464263 CCDC60Q8IWA6 550 aaPredicted RBP17.4■□□□□ 0.38
RAB11FIP3-208ENST00000464263 NOC4LQ9BVI4 516 aaKnown RBP17.4■□□□□ 0.38
RAB11FIP3-208ENST00000464263 HIPK3Q9H422 1215 aa17.4■□□□□ 0.38
RAB11FIP3-208ENST00000464263 DISC1Q9NRI5 854 aa17.4■□□□□ 0.38
RAB11FIP3-208ENST00000464263 SETD4Q9NVD3 440 aa17.4■□□□□ 0.38
RAB11FIP3-208ENST00000464263 MAFBQ9Y5Q3 323 aaPredicted RBP17.4■□□□□ 0.38
RAB11FIP3-208ENST00000464263 C17orf102A2RUQ5 167 aa17.39■□□□□ 0.37
RAB11FIP3-208ENST00000464263 WDR64B1ANS9 1081 aa17.39■□□□□ 0.37
RAB11FIP3-208ENST00000464263 H3BQV1 296 aa17.39■□□□□ 0.37
RAB11FIP3-208ENST00000464263 PSAPP07602 524 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms