RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 DCTN4Q9UJW0 460 aa6.9□□□□□ -1.3
CD46-211ENST00000464082 ELL2O00472 640 aaPredicted RBP6.89□□□□□ -1.31
CD46-211ENST00000464082 ANP32CO43423 234 aa6.89□□□□□ -1.31
CD46-211ENST00000464082 GNAI1P63096 354 aa6.89□□□□□ -1.31
CD46-211ENST00000464082 AIMP1Q12904 312 aaKnown RBP6.89□□□□□ -1.31
CD46-211ENST00000464082 TCIRG1Q13488 830 aa6.89□□□□□ -1.31
CD46-211ENST00000464082 RTP5Q14D33 572 aa6.89□□□□□ -1.31
CD46-211ENST00000464082 HHIPL2Q6UWX4 724 aa6.89□□□□□ -1.31
CD46-211ENST00000464082 LINC01356Q8N9X3 169 aa6.89□□□□□ -1.31
CD46-211ENST00000464082 FBF1Q8TES7 1133 aa6.89□□□□□ -1.31
CD46-211ENST00000464082 NYXQ9GZU5 481 aa6.89□□□□□ -1.31
CD46-211ENST00000464082 PHAXQ9H814 394 aaKnown RBP6.89□□□□□ -1.31
CD46-211ENST00000464082 DBF4Q9UBU7 674 aaPredicted RBP6.89□□□□□ -1.31
CD46-211ENST00000464082 ZNF521Q96K83 1311 aa6.89□□□□□ -1.31
CD46-211ENST00000464082 PCNTO95613 3336 aa6.88□□□□□ -1.31
CD46-211ENST00000464082 ABCC4O15439 1325 aa6.88□□□□□ -1.31
CD46-211ENST00000464082 IL16Q14005 1332 aa6.88□□□□□ -1.31
CD46-211ENST00000464082 RBM47A0AV96 593 aaKnown RBP6.88□□□□□ -1.31
CD46-211ENST00000464082 GLTPD2A6NH11 291 aa6.88□□□□□ -1.31
CD46-211ENST00000464082 SOWAHDA6NJG2 315 aa6.88□□□□□ -1.31
CD46-211ENST00000464082 CILPO75339 1184 aa6.88□□□□□ -1.31
CD46-211ENST00000464082 YBX1P67809 324 aaKnown RBP6.88□□□□□ -1.31
CD46-211ENST00000464082 PARP10Q53GL7 1025 aa6.88□□□□□ -1.31
CD46-211ENST00000464082 IGDCC3Q8IVU1 814 aa6.88□□□□□ -1.31
CD46-211ENST00000464082 PLBD2Q8NHP8 589 aa6.88□□□□□ -1.31
CD46-211ENST00000464082 CYB5D2Q8WUJ1 264 aa6.88□□□□□ -1.31
CD46-211ENST00000464082 ZNF428Q96B54 188 aa6.88□□□□□ -1.31
CD46-211ENST00000464082 PWWP2AQ96N64 755 aa6.88□□□□□ -1.31
CD46-211ENST00000464082 TAOK3Q9H2K8 898 aa6.88□□□□□ -1.31
CD46-211ENST00000464082 RNF123Q5XPI4 1314 aa6.87□□□□□ -1.31
CD46-211ENST00000464082 FANCIQ9NVI1 1328 aa6.87□□□□□ -1.31
CD46-211ENST00000464082 GIPC1O14908 333 aa6.87□□□□□ -1.31
CD46-211ENST00000464082 NPHP1O15259 732 aa6.87□□□□□ -1.31
CD46-211ENST00000464082 AKAP8O43823 692 aaKnown RBP6.87□□□□□ -1.31
CD46-211ENST00000464082 MAPK8P45983 427 aa6.87□□□□□ -1.31
CD46-211ENST00000464082 CCDC93Q567U6 631 aa6.87□□□□□ -1.31
CD46-211ENST00000464082 G2E3Q7L622 706 aa6.87□□□□□ -1.31
CD46-211ENST00000464082 PPP1R42Q7Z4L9 355 aa6.87□□□□□ -1.31
CD46-211ENST00000464082 RNF141Q8WVD5 230 aa6.87□□□□□ -1.31
CD46-211ENST00000464082 CRAMP1Q96RY5 1269 aa6.87□□□□□ -1.31
CD46-211ENST00000464082 UTP14AQ9BVJ6 771 aaKnown RBP6.87□□□□□ -1.31
CD46-211ENST00000464082 C12orf49Q9H741 205 aa6.87□□□□□ -1.31
CD46-211ENST00000464082 C1orf115Q9H7X2 142 aa6.87□□□□□ -1.31
CD46-211ENST00000464082 CRTAC1Q9NQ79 661 aa6.87□□□□□ -1.31
CD46-211ENST00000464082 HYPKQ9NX55 129 aa6.87□□□□□ -1.31
CD46-211ENST00000464082 TTF2Q9UNY4 1162 aaKnown RBP6.87□□□□□ -1.31
CD46-211ENST00000464082 MYRFQ9Y2G1 1151 aa6.87□□□□□ -1.31
CD46-211ENST00000464082 CORINQ9Y5Q5 1042 aa6.87□□□□□ -1.31
CD46-211ENST00000464082 SH3TC1Q8TE82 1336 aa6.86□□□□□ -1.31
CD46-211ENST00000464082 ZNF541Q9H0D2 1346 aa6.86□□□□□ -1.31
CD46-211ENST00000464082 TCERG1O14776 1098 aaKnown RBP6.86□□□□□ -1.31
CD46-211ENST00000464082 NRDCO43847 1150 aa6.86□□□□□ -1.31
CD46-211ENST00000464082 TOMM70O94826 608 aa6.86□□□□□ -1.31
CD46-211ENST00000464082 HSPA6P17066 643 aa6.86□□□□□ -1.31
CD46-211ENST00000464082 RPL10P27635 214 aaKnown RBP6.86□□□□□ -1.31
CD46-211ENST00000464082 ALDH1B1P30837 517 aa6.86□□□□□ -1.31
CD46-211ENST00000464082 CALD1Q05682 793 aaKnown RBP6.86□□□□□ -1.31
CD46-211ENST00000464082 HSP90AB3PQ58FF7 597 aa6.86□□□□□ -1.31
CD46-211ENST00000464082 SOGA3Q5TF21 947 aa6.86□□□□□ -1.31
CD46-211ENST00000464082 PSMD1Q99460 953 aa6.86□□□□□ -1.31
CD46-211ENST00000464082 PLCD4Q9BRC7 762 aa6.86□□□□□ -1.31
CD46-211ENST00000464082 ZNF277Q9NRM2 450 aaPredicted RBP6.86□□□□□ -1.31
CD46-211ENST00000464082 FAM8A1Q9UBU6 413 aa6.86□□□□□ -1.31
CD46-211ENST00000464082 ADAM30Q9UKF2 790 aa6.86□□□□□ -1.31
CD46-211ENST00000464082 KDM2BQ8NHM5 1336 aa6.85□□□□□ -1.31
CD46-211ENST00000464082 FZD9O00144 591 aa6.85□□□□□ -1.31
CD46-211ENST00000464082 VAMP4O75379 141 aa6.85□□□□□ -1.31
CD46-211ENST00000464082 DDNO94850 711 aaPredicted RBP6.85□□□□□ -1.31
CD46-211ENST00000464082 IGKV5-2P06315 115 aa6.85□□□□□ -1.31
CD46-211ENST00000464082 IARSP41252 1262 aaKnown RBP6.85□□□□□ -1.31
CD46-211ENST00000464082 RPS26P62854 115 aaKnown RBP6.85□□□□□ -1.31
CD46-211ENST00000464082 PDE4BQ07343 736 aa6.85□□□□□ -1.31
CD46-211ENST00000464082 KIR3DS1Q14943 382 aa6.85□□□□□ -1.31
CD46-211ENST00000464082 SLC14A2Q15849 920 aa6.85□□□□□ -1.31
CD46-211ENST00000464082 TWISTNBQ3B726 338 aaPredicted RBP6.85□□□□□ -1.31
CD46-211ENST00000464082 CEP128Q6ZU80 1094 aa6.85□□□□□ -1.31
CD46-211ENST00000464082 WDR63Q8IWG1 891 aa6.85□□□□□ -1.31
CD46-211ENST00000464082 RPGRQ92834 1020 aaKnown RBP6.85□□□□□ -1.31
CD46-211ENST00000464082 FAM89AQ96GI7 184 aa6.85□□□□□ -1.31
CD46-211ENST00000464082 GPR20Q99678 358 aa6.85□□□□□ -1.31
CD46-211ENST00000464082 BIN2Q9UBW5 565 aaPredicted RBP6.85□□□□□ -1.31
CD46-211ENST00000464082 TRMT112Q9UI30 125 aaKnown RBP6.85□□□□□ -1.31
CD46-211ENST00000464082 ZMYM5Q9UJ78 669 aa6.85□□□□□ -1.31
CD46-211ENST00000464082 SUV39H1O43463 412 aa6.84□□□□□ -1.31
CD46-211ENST00000464082 MAPK1P28482 360 aa6.84□□□□□ -1.31
CD46-211ENST00000464082 SF3B3Q15393 1217 aaKnown RBP6.84□□□□□ -1.31
CD46-211ENST00000464082 CCDC30Q5VVM6 783 aa6.84□□□□□ -1.31
CD46-211ENST00000464082 LDHDQ86WU2 507 aa6.84□□□□□ -1.31
CD46-211ENST00000464082 RTKN2Q8IZC4 609 aa6.84□□□□□ -1.31
CD46-211ENST00000464082 FAM9BQ8IZU0 186 aa6.84□□□□□ -1.31
CD46-211ENST00000464082 FAM13CQ8NE31 585 aa6.84□□□□□ -1.31
CD46-211ENST00000464082 JARID2Q92833 1246 aaPredicted RBP6.84□□□□□ -1.31
CD46-211ENST00000464082 CELF1Q92879 486 aaKnown RBP6.84□□□□□ -1.31
CD46-211ENST00000464082 RBM17Q96I25 401 aaKnown RBP6.84□□□□□ -1.31
CD46-211ENST00000464082 MAP6Q96JE9 813 aa6.84□□□□□ -1.31
CD46-211ENST00000464082 MYD88Q99836 296 aa6.84□□□□□ -1.31
CD46-211ENST00000464082 RTFDC1Q9BY42 306 aaPredicted RBP6.84□□□□□ -1.31
CD46-211ENST00000464082 KLHL14Q9P2G3 628 aa6.84□□□□□ -1.31
CD46-211ENST00000464082 ATP6V0A2Q9Y487 856 aa6.84□□□□□ -1.31
CD46-211ENST00000464082 ECM29Q5VYK3 1845 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms