RNA–Protein interactions for RNA: ENST00000464045.1

THUMPD3-208, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-208ENST00000464045 TTYH1Q9H313 450 aaPredicted RBP8.47□□□□□ -1.05
THUMPD3-208ENST00000464045 SEMA6BQ9H3T3 888 aa8.47□□□□□ -1.05
THUMPD3-208ENST00000464045 TUT1Q9H6E5 874 aaKnown RBP8.47□□□□□ -1.05
THUMPD3-208ENST00000464045 JPH1Q9HDC5 661 aaPredicted RBP8.47□□□□□ -1.05
THUMPD3-208ENST00000464045 IL23AQ9NPF7 189 aa8.47□□□□□ -1.05
THUMPD3-208ENST00000464045 TMEM260Q9NX78 707 aa8.47□□□□□ -1.05
THUMPD3-208ENST00000464045 VPS54Q9P1Q0 977 aa8.47□□□□□ -1.05
THUMPD3-208ENST00000464045 PCDHA4Q9UN74 947 aa8.47□□□□□ -1.05
THUMPD3-208ENST00000464045 NCOR1O75376 2440 aa8.46□□□□□ -1.05
THUMPD3-208ENST00000464045 CHD9Q3L8U1 2897 aa8.46□□□□□ -1.05
THUMPD3-208ENST00000464045 ATP9AO75110 1047 aa8.46□□□□□ -1.06
THUMPD3-208ENST00000464045 GNAT1P11488 350 aa8.46□□□□□ -1.06
THUMPD3-208ENST00000464045 CYP2C9P11712 490 aa8.46□□□□□ -1.06
THUMPD3-208ENST00000464045 CSF2RAP15509 400 aa8.46□□□□□ -1.06
THUMPD3-208ENST00000464045 CYP2C18P33260 490 aa8.46□□□□□ -1.06
THUMPD3-208ENST00000464045 ZNF76P36508 570 aa8.46□□□□□ -1.06
THUMPD3-208ENST00000464045 RBM25P49756 843 aaKnown RBP8.46□□□□□ -1.06
THUMPD3-208ENST00000464045 USP11P51784 963 aa8.46□□□□□ -1.06
THUMPD3-208ENST00000464045 SMAD3P84022 425 aaKnown RBP8.46□□□□□ -1.06
THUMPD3-208ENST00000464045 PTK7Q13308 1070 aa8.46□□□□□ -1.06
THUMPD3-208ENST00000464045 GDF6Q6KF10 455 aaPredicted RBP8.46□□□□□ -1.06
THUMPD3-208ENST00000464045 RETREG2Q8NC44 543 aa8.46□□□□□ -1.06
THUMPD3-208ENST00000464045 AFAP1L1Q8TED9 768 aa8.46□□□□□ -1.06
THUMPD3-208ENST00000464045 PPM1EQ8WY54 764 aa8.46□□□□□ -1.06
THUMPD3-208ENST00000464045 TNPO1Q92973 898 aaKnown RBP8.46□□□□□ -1.06
THUMPD3-208ENST00000464045 GTF3C6Q969F1 213 aa8.46□□□□□ -1.06
THUMPD3-208ENST00000464045 PGBD1Q96JS3 809 aa8.46□□□□□ -1.06
THUMPD3-208ENST00000464045 RNPC3Q96LT9 517 aaKnown RBP8.46□□□□□ -1.06
THUMPD3-208ENST00000464045 LARP6Q9BRS8 491 aaKnown RBP8.46□□□□□ -1.06
THUMPD3-208ENST00000464045 ALG1Q9BT22 464 aa8.46□□□□□ -1.06
THUMPD3-208ENST00000464045 WNT8AQ9H1J5 351 aa8.46□□□□□ -1.06
THUMPD3-208ENST00000464045 MTIF3Q9H2K0 278 aaKnown RBP8.46□□□□□ -1.06
THUMPD3-208ENST00000464045 SMARCAD1Q9H4L7 1026 aa8.46□□□□□ -1.06
THUMPD3-208ENST00000464045 BCAS3Q9H6U6 928 aa8.46□□□□□ -1.06
THUMPD3-208ENST00000464045 UPF2Q9HAU5 1272 aaKnown RBP8.46□□□□□ -1.06
THUMPD3-208ENST00000464045 AGO4Q9HCK5 861 aaKnown RBP8.46□□□□□ -1.06
THUMPD3-208ENST00000464045 HDAC6Q9UBN7 1215 aa8.46□□□□□ -1.06
THUMPD3-208ENST00000464045 SLC9A2Q9UBY0 812 aa8.46□□□□□ -1.06
THUMPD3-208ENST00000464045 EMSYQ7Z589 1322 aa8.46□□□□□ -1.06
THUMPD3-208ENST00000464045 IGLV3-22A0A075B6J6 115 aa8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 C17orf102A2RUQ5 167 aa8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 FAM86B1E9PN63 330 aa8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 M0R2N6 131 aa8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 IPO5O00410 1097 aaKnown RBP8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 SORBS3O60504 671 aa8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 PPFIA3O75145 1194 aa8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 CAND2O75155 1236 aa8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 LGR5O75473 907 aa8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 FAM86B2P0C5J1 330 aa8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 SMIM10L2AP0DMW4 78 aa8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 SMIM10L2BP0DMW5 78 aa8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 ARP10275 920 aa8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 FOSL2P15408 326 aa8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 SELPP16109 830 aa8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 TCF7P36402 384 aaPredicted RBP8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 SLC26A2P50443 739 aa8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 CCL23P55773 120 aa8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 CHMP4BP1P59074 171 aa8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 ME3Q16798 604 aa8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 TMEM240Q5SV17 173 aa8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 RASIP1Q5U651 963 aa8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 FAM109BQ6ICB4 259 aaPredicted RBP8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 MOXD1Q6UVY6 613 aa8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 C16orf59Q7L2K0 433 aa8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 KRT25Q7Z3Z0 450 aa8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 SERINC5Q86VE9 423 aa8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 PLA2G4DQ86XP0 818 aa8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 BLIDQ8IZY5 108 aa8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 CYP2W1Q8TAV3 490 aa8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 HERVK_113Q902F9 699 aa8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 CTAGE1Q96RT6 745 aa8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.45□□□□□ -1.065e-6■□□□□ 10.9
THUMPD3-208ENST00000464045 PHF20Q9BVI0 1012 aa8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 TBC1D22BQ9NU19 505 aa8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 ERAP1Q9NZ08 941 aa8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 LIMCH1Q9UPQ0 1083 aa8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 UMODL1Q5DID0 1318 aa8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 NRCAMQ92823 1304 aa8.45□□□□□ -1.06
THUMPD3-208ENST00000464045 TMEM265A0A087WTH1 108 aa8.44□□□□□ -1.06
THUMPD3-208ENST00000464045 CYP3A7-CYP3A51PA0A087WV96 503 aa8.44□□□□□ -1.06
THUMPD3-208ENST00000464045 GSTTP1A0A1W2PQM5 241 aa8.44□□□□□ -1.06
THUMPD3-208ENST00000464045 GRXCR1A8MXD5 290 aa8.44□□□□□ -1.06
THUMPD3-208ENST00000464045 ATG7O95352 703 aa8.44□□□□□ -1.06
THUMPD3-208ENST00000464045 CTDNEP1O95476 244 aa8.44□□□□□ -1.06
THUMPD3-208ENST00000464045 FGBP02675 491 aa8.44□□□□□ -1.06
THUMPD3-208ENST00000464045 RPLP2P05387 115 aaKnown RBP8.44□□□□□ -1.06
THUMPD3-208ENST00000464045 IQCF3P0C7M6 154 aa8.44□□□□□ -1.06
THUMPD3-208ENST00000464045 CYP3A7P24462 503 aa8.44□□□□□ -1.06
THUMPD3-208ENST00000464045 ACTR2P61160 394 aa8.44□□□□□ -1.06
THUMPD3-208ENST00000464045 SP4Q02446 784 aa8.44□□□□□ -1.06
THUMPD3-208ENST00000464045 ITGB3BPQ13352 177 aaPredicted RBP8.44□□□□□ -1.06
THUMPD3-208ENST00000464045 NPY5RQ15761 445 aa8.44□□□□□ -1.06
THUMPD3-208ENST00000464045 TRIM71Q2Q1W2 868 aaKnown RBP8.44□□□□□ -1.06
THUMPD3-208ENST00000464045 UTP14CQ5TAP6 766 aaKnown RBP8.44□□□□□ -1.06
THUMPD3-208ENST00000464045 ZNF746Q6NUN9 644 aaPredicted RBP8.44□□□□□ -1.06
THUMPD3-208ENST00000464045 PLPPR4Q7Z2D5 763 aa8.44□□□□□ -1.06
THUMPD3-208ENST00000464045 SMAP1Q8IYB5 467 aaPredicted RBP8.44□□□□□ -1.06
THUMPD3-208ENST00000464045 RASGRP4Q8TDF6 673 aa8.44□□□□□ -1.06
THUMPD3-208ENST00000464045 DHX38Q92620 1227 aaKnown RBP8.44□□□□□ -1.06
THUMPD3-208ENST00000464045 GLG1Q92896 1179 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms