RNA–Protein interactions for RNA: ENST00000463875.6

GTDC1-212, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene GTDC1, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-212ENST00000463875 CASP10Q92851 521 aa8.12□□□□□ -1.11
GTDC1-212ENST00000463875 IWS1Q96ST2 819 aa8.12□□□□□ -1.11
GTDC1-212ENST00000463875 SMOC2Q9H3U7 446 aa8.12□□□□□ -1.11
GTDC1-212ENST00000463875 POMKQ9H5K3 350 aa8.12□□□□□ -1.11
GTDC1-212ENST00000463875 ERVK-5Q9HDB9 667 aa8.12□□□□□ -1.11
GTDC1-212ENST00000463875 CYP26B1Q9NR63 512 aa8.12□□□□□ -1.11
GTDC1-212ENST00000463875 WNT16Q9UBV4 365 aa8.12□□□□□ -1.11
GTDC1-212ENST00000463875 DDX41Q9UJV9 622 aaKnown RBP8.12□□□□□ -1.11
GTDC1-212ENST00000463875 DUSP12Q9UNI6 340 aa8.12□□□□□ -1.11
GTDC1-212ENST00000463875 LZTS1Q9Y250 596 aa8.12□□□□□ -1.11
GTDC1-212ENST00000463875 TTC3P53804 2025 aa8.11□□□□□ -1.11
GTDC1-212ENST00000463875 FANCMQ8IYD8 2048 aa8.11□□□□□ -1.11
GTDC1-212ENST00000463875 FSCN2O14926 492 aa8.11□□□□□ -1.11
GTDC1-212ENST00000463875 ASGR2P07307 311 aa8.11□□□□□ -1.11
GTDC1-212ENST00000463875 CTSHP09668 335 aa8.11□□□□□ -1.11
GTDC1-212ENST00000463875 TSPY3P0CV98 308 aa8.11□□□□□ -1.11
GTDC1-212ENST00000463875 TSPY8P0CW00 308 aa8.11□□□□□ -1.11
GTDC1-212ENST00000463875 RARSP54136 660 aaKnown RBP8.11□□□□□ -1.11
GTDC1-212ENST00000463875 SHC2P98077 582 aa8.11□□□□□ -1.11
GTDC1-212ENST00000463875 RBM10P98175 930 aaKnown RBP8.11□□□□□ -1.11
GTDC1-212ENST00000463875 COL9A3Q14050 684 aaPredicted RBP8.11□□□□□ -1.11
GTDC1-212ENST00000463875 PPM1JQ5JR12 505 aa8.11□□□□□ -1.11
GTDC1-212ENST00000463875 KCNV1Q6PIU1 500 aa8.11□□□□□ -1.11
GTDC1-212ENST00000463875 BTNL9Q6UXG8 535 aa8.11□□□□□ -1.11
GTDC1-212ENST00000463875 SEPT14Q6ZU15 432 aa8.11□□□□□ -1.11
GTDC1-212ENST00000463875 KCTD1Q719H9 257 aa8.11□□□□□ -1.11
GTDC1-212ENST00000463875 RASGRP2Q7LDG7 609 aa8.11□□□□□ -1.11
GTDC1-212ENST00000463875 AACSQ86V21 672 aa8.11□□□□□ -1.11
GTDC1-212ENST00000463875 NPAS4Q8IUM7 802 aa8.11□□□□□ -1.11
GTDC1-212ENST00000463875 C1orf210Q8IVY1 113 aa8.11□□□□□ -1.11
GTDC1-212ENST00000463875 SIX5Q8N196 739 aa8.11□□□□□ -1.11
GTDC1-212ENST00000463875 CRIPAKQ8N1N5 446 aa8.11□□□□□ -1.11
GTDC1-212ENST00000463875 NSUN6Q8TEA1 469 aaKnown RBP8.11□□□□□ -1.11
GTDC1-212ENST00000463875 CLEC4DQ8WXI8 215 aa8.11□□□□□ -1.11
GTDC1-212ENST00000463875 DDX1Q92499 740 aaKnown RBP8.11□□□□□ -1.11
GTDC1-212ENST00000463875 FTHL17Q9BXU8 183 aa8.11□□□□□ -1.11
GTDC1-212ENST00000463875 EHMT1Q9H9B1 1298 aa8.11□□□□□ -1.11
GTDC1-212ENST00000463875 NGRNQ9NPE2 291 aaKnown RBP8.11□□□□□ -1.11
GTDC1-212ENST00000463875 TREHO43280 583 aa8.1□□□□□ -1.11
GTDC1-212ENST00000463875 HOXB3P14651 431 aaPredicted RBP8.1□□□□□ -1.11
GTDC1-212ENST00000463875 RFX1P22670 979 aa8.1□□□□□ -1.11
GTDC1-212ENST00000463875 SNAP25P60880 206 aa8.1□□□□□ -1.11
GTDC1-212ENST00000463875 ZSCAN25Q6NSZ9 544 aa8.1□□□□□ -1.11
GTDC1-212ENST00000463875 ACSF2Q96CM8 615 aaPredicted RBP8.1□□□□□ -1.11
GTDC1-212ENST00000463875 GPR20Q99678 358 aa8.1□□□□□ -1.11
GTDC1-212ENST00000463875 C16orf70Q9BSU1 422 aa8.1□□□□□ -1.11
GTDC1-212ENST00000463875 OSBPL7Q9BZF2 842 aa8.1□□□□□ -1.11
GTDC1-212ENST00000463875 MRS2Q9HD23 443 aa8.1□□□□□ -1.11
GTDC1-212ENST00000463875 PUF60Q9UHX1 559 aaKnown RBP8.1□□□□□ -1.11
GTDC1-212ENST00000463875 WDR19Q8NEZ3 1342 aa8.1□□□□□ -1.11
GTDC1-212ENST00000463875 H3BRB1 525 aa8.1□□□□□ -1.11
GTDC1-212ENST00000463875 STK25O00506 426 aa8.1□□□□□ -1.11
GTDC1-212ENST00000463875 SLC30A4O14863 429 aa8.1□□□□□ -1.11
GTDC1-212ENST00000463875 EIF3JO75822 258 aaKnown RBP8.1□□□□□ -1.11
GTDC1-212ENST00000463875 FGF18O76093 207 aa8.1□□□□□ -1.11
GTDC1-212ENST00000463875 EOMESO95936 686 aa8.1□□□□□ -1.11
GTDC1-212ENST00000463875 RPLP2P05387 115 aaKnown RBP8.1□□□□□ -1.11
GTDC1-212ENST00000463875 SMIM10L2AP0DMW4 78 aa8.1□□□□□ -1.11
GTDC1-212ENST00000463875 SMIM10L2BP0DMW5 78 aa8.1□□□□□ -1.11
GTDC1-212ENST00000463875 ERVFC1P60507 584 aa8.1□□□□□ -1.11
GTDC1-212ENST00000463875 NONOQ15233 471 aaKnown RBP eCLIP8.1□□□□□ -1.11
GTDC1-212ENST00000463875 ATAT1Q5SQI0 421 aa8.1□□□□□ -1.11
GTDC1-212ENST00000463875 PHLDB3Q6NSJ2 640 aa8.1□□□□□ -1.11
GTDC1-212ENST00000463875 NETO1Q8TDF5 533 aa8.1□□□□□ -1.11
GTDC1-212ENST00000463875 DCAF4Q8WV16 495 aa8.1□□□□□ -1.11
GTDC1-212ENST00000463875 RIN2Q8WYP3 895 aaPredicted RBP8.1□□□□□ -1.11
GTDC1-212ENST00000463875 DNAJC2Q99543 621 aaKnown RBP8.1□□□□□ -1.11
GTDC1-212ENST00000463875 APOL5Q9BWW9 433 aa8.1□□□□□ -1.11
GTDC1-212ENST00000463875 RNPEPQ9H4A4 650 aa8.1□□□□□ -1.11
GTDC1-212ENST00000463875 TUT1Q9H6E5 874 aaKnown RBP8.1□□□□□ -1.11
GTDC1-212ENST00000463875 IGSF9Q9P2J2 1179 aa8.1□□□□□ -1.11
GTDC1-212ENST00000463875 PCDHGA2Q9Y5H1 932 aa8.1□□□□□ -1.11
GTDC1-212ENST00000463875 MRVI1Q9Y6F6 885 aa8.1□□□□□ -1.11
GTDC1-212ENST00000463875 MINDY4BA8MYZ0 360 aa8.09□□□□□ -1.11
GTDC1-212ENST00000463875 IPO8O15397 1037 aaKnown RBP8.09□□□□□ -1.11
GTDC1-212ENST00000463875 PPFIA3O75145 1194 aa8.09□□□□□ -1.11
GTDC1-212ENST00000463875 PROS1P07225 676 aa8.09□□□□□ -1.11
GTDC1-212ENST00000463875 GHRP10912 638 aa8.09□□□□□ -1.11
GTDC1-212ENST00000463875 PRKCSHP14314 528 aaPredicted RBP8.09□□□□□ -1.11
GTDC1-212ENST00000463875 SLFN5Q08AF3 891 aa8.09□□□□□ -1.11
GTDC1-212ENST00000463875 SYDE2Q5VT97 1194 aa8.09□□□□□ -1.11
GTDC1-212ENST00000463875 MYSM1Q5VVJ2 828 aa8.09□□□□□ -1.11
GTDC1-212ENST00000463875 KIAA1841Q6NSI8 718 aa8.09□□□□□ -1.11
GTDC1-212ENST00000463875 TAF2Q6P1X5 1199 aa8.09□□□□□ -1.11
GTDC1-212ENST00000463875 XRRA1Q6P2D8 792 aa8.09□□□□□ -1.11
GTDC1-212ENST00000463875 OTOP3Q7RTS5 596 aa8.09□□□□□ -1.11
GTDC1-212ENST00000463875 RSPH3Q86UC2 560 aa8.09□□□□□ -1.11
GTDC1-212ENST00000463875 SPATA33Q96N06 139 aa8.09□□□□□ -1.11
GTDC1-212ENST00000463875 PAG1Q9NWQ8 432 aa8.09□□□□□ -1.11
GTDC1-212ENST00000463875 TMEM260Q9NX78 707 aa8.09□□□□□ -1.11
GTDC1-212ENST00000463875 DBR1Q9UK59 544 aaKnown RBP8.09□□□□□ -1.11
GTDC1-212ENST00000463875 FBXO4Q9UKT5 387 aa8.09□□□□□ -1.11
GTDC1-212ENST00000463875 SQORQ9Y6N5 450 aa8.09□□□□□ -1.11
GTDC1-212ENST00000463875 GSG1L2A8MUP6 293 aa8.08□□□□□ -1.12
GTDC1-212ENST00000463875 TBC1D4O60343 1298 aa8.08□□□□□ -1.12
GTDC1-212ENST00000463875 PRDM1O75626 825 aa8.08□□□□□ -1.12
GTDC1-212ENST00000463875 BCAR3O75815 825 aa8.08□□□□□ -1.12
GTDC1-212ENST00000463875 CHRNA1P02708 482 aa8.08□□□□□ -1.12
GTDC1-212ENST00000463875 SLC3A2P08195 630 aaKnown RBP8.08□□□□□ -1.12
GTDC1-212ENST00000463875 TGFB3P10600 412 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms