RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 FOSP01100 380 aaPredicted RBP21.58■■□□□ 1.05
SF3A1-205ENST00000463818 HSPA4P34932 840 aa21.58■■□□□ 1.05
SF3A1-205ENST00000463818 RCAN1P53805 252 aa21.58■■□□□ 1.05
SF3A1-205ENST00000463818 APOBRQ0VD83 1088 aa21.58■■□□□ 1.05
SF3A1-205ENST00000463818 PPP1R18Q6NYC8 613 aa21.58■■□□□ 1.05
SF3A1-205ENST00000463818 Q6ZUG5 572 aa21.58■■□□□ 1.05
SF3A1-205ENST00000463818 TEX2Q8IWB9 1127 aa21.58■■□□□ 1.05
SF3A1-205ENST00000463818 MICALL1Q8N3F8 863 aa21.58■■□□□ 1.05
SF3A1-205ENST00000463818 CYP2W1Q8TAV3 490 aa21.58■■□□□ 1.05
SF3A1-205ENST00000463818 PGBD1Q96JS3 809 aa21.58■■□□□ 1.05
SF3A1-205ENST00000463818 JAKMIP1Q96N16 626 aaKnown RBP21.58■■□□□ 1.05
SF3A1-205ENST00000463818 RAD9AQ99638 391 aa21.58■■□□□ 1.05
SF3A1-205ENST00000463818 MXRA8Q9BRK3 442 aa21.58■■□□□ 1.05
SF3A1-205ENST00000463818 BARHL2Q9NY43 387 aa21.58■■□□□ 1.05
SF3A1-205ENST00000463818 SNX14Q9Y5W7 946 aa21.58■■□□□ 1.05
SF3A1-205ENST00000463818 LCHNA4D1U4 455 aa21.57■■□□□ 1.04
SF3A1-205ENST00000463818 hCG_1984214I3L0E3 225 aa21.57■■□□□ 1.04
SF3A1-205ENST00000463818 GJB5O95377 273 aa21.57■■□□□ 1.04
SF3A1-205ENST00000463818 CTSHP09668 335 aa21.57■■□□□ 1.04
SF3A1-205ENST00000463818 ADCY7P51828 1080 aa21.57■■□□□ 1.04
SF3A1-205ENST00000463818 PLEKHG4Q58EX7 1191 aa21.57■■□□□ 1.04
SF3A1-205ENST00000463818 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.57■■□□□ 1.04
SF3A1-205ENST00000463818 ZNF713Q8N859 430 aaPredicted RBP21.57■■□□□ 1.04
SF3A1-205ENST00000463818 LMBR1Q8WVP7 490 aa21.57■■□□□ 1.04
SF3A1-205ENST00000463818 SYMPKQ92797 1274 aaKnown RBP21.57■■□□□ 1.04
SF3A1-205ENST00000463818 OSBPL7Q9BZF2 842 aa21.57■■□□□ 1.04
SF3A1-205ENST00000463818 KCNH7Q9NS40 1196 aa21.57■■□□□ 1.04
SF3A1-205ENST00000463818 EYSQ5T1H1 3165 aa21.57■■□□□ 1.04
SF3A1-205ENST00000463818 PRUNE2Q8WUY3 3088 aa21.57■■□□□ 1.04
SF3A1-205ENST00000463818 NRCAMQ92823 1304 aa21.56■■□□□ 1.04
SF3A1-205ENST00000463818 CAND2O75155 1236 aa21.56■■□□□ 1.04
SF3A1-205ENST00000463818 POU3F3P20264 500 aaPredicted RBP21.56■■□□□ 1.04
SF3A1-205ENST00000463818 METAP2P50579 478 aaKnown RBP eCLIP21.56■■□□□ 1.04
SF3A1-205ENST00000463818 FAM117BQ6P1L5 589 aa21.56■■□□□ 1.04
SF3A1-205ENST00000463818 BLOC1S2Q6QNY1 142 aa21.56■■□□□ 1.04
SF3A1-205ENST00000463818 SPRED2Q7Z698 418 aa21.56■■□□□ 1.04
SF3A1-205ENST00000463818 GLG1Q92896 1179 aa21.56■■□□□ 1.04
SF3A1-205ENST00000463818 BRF1Q92994 677 aa21.56■■□□□ 1.04
SF3A1-205ENST00000463818 ANO3Q9BYT9 981 aa21.56■■□□□ 1.04
SF3A1-205ENST00000463818 SMARCAD1Q9H4L7 1026 aa21.56■■□□□ 1.04
SF3A1-205ENST00000463818 TMEM260Q9NX78 707 aa21.56■■□□□ 1.04
SF3A1-205ENST00000463818 MTCH2Q9Y6C9 303 aa21.56■■□□□ 1.04
SF3A1-205ENST00000463818 TANC1Q9C0D5 1861 aa21.56■■□□□ 1.04
SF3A1-205ENST00000463818 CCDC196A0A1B0GTZ2 297 aa21.55■■□□□ 1.04
SF3A1-205ENST00000463818 GTPBP6O43824 516 aaPredicted RBP21.55■■□□□ 1.04
SF3A1-205ENST00000463818 ARP10275 920 aa21.55■■□□□ 1.04
SF3A1-205ENST00000463818 TJAP1Q5JTD0 557 aa21.55■■□□□ 1.04
SF3A1-205ENST00000463818 ATXN2LQ8WWM7 1075 aaKnown RBP21.55■■□□□ 1.04
SF3A1-205ENST00000463818 SEPT8Q92599 483 aa21.55■■□□□ 1.04
SF3A1-205ENST00000463818 GLT8D2Q9H1C3 349 aa21.55■■□□□ 1.04
SF3A1-205ENST00000463818 ERAP1Q9NZ08 941 aa21.55■■□□□ 1.04
SF3A1-205ENST00000463818 GBF1Q92538 1859 aa21.54■■□□□ 1.04
SF3A1-205ENST00000463818 AMHP03971 560 aa21.54■■□□□ 1.04
SF3A1-205ENST00000463818 MARK3P27448 753 aa21.54■■□□□ 1.04
SF3A1-205ENST00000463818 PPFIA1Q13136 1202 aa21.54■■□□□ 1.04
SF3A1-205ENST00000463818 PFKFB3Q16875 520 aaPredicted RBP21.54■■□□□ 1.04
SF3A1-205ENST00000463818 CEP55Q53EZ4 464 aa21.54■■□□□ 1.04
SF3A1-205ENST00000463818 FAM26DQ5JW98 314 aa21.54■■□□□ 1.04
SF3A1-205ENST00000463818 JPH1Q9HDC5 661 aaPredicted RBP21.54■■□□□ 1.04
SF3A1-205ENST00000463818 THEGQ9P2T0 379 aa21.54■■□□□ 1.04
SF3A1-205ENST00000463818 SLC9A2Q9UBY0 812 aa21.54■■□□□ 1.04
SF3A1-205ENST00000463818 MEIS1O00470 390 aa21.53■■□□□ 1.04
SF3A1-205ENST00000463818 RPS6KB1P23443 525 aa21.53■■□□□ 1.04
SF3A1-205ENST00000463818 CLK2P49760 499 aaKnown RBP21.53■■□□□ 1.04
SF3A1-205ENST00000463818 GRB10Q13322 594 aa21.53■■□□□ 1.04
SF3A1-205ENST00000463818 AP3B2Q13367 1082 aa21.53■■□□□ 1.04
SF3A1-205ENST00000463818 MKRN4PQ13434 485 aaPredicted RBP21.53■■□□□ 1.04
SF3A1-205ENST00000463818 GRIK4Q16099 956 aa21.53■■□□□ 1.04
SF3A1-205ENST00000463818 JAKMIP3Q5VZ66 844 aa21.53■■□□□ 1.04
SF3A1-205ENST00000463818 KRT40Q6A162 431 aa21.53■■□□□ 1.04
SF3A1-205ENST00000463818 RUFY4Q6ZNE9 571 aa21.53■■□□□ 1.04
SF3A1-205ENST00000463818 MYOCDQ8IZQ8 938 aa21.53■■□□□ 1.04
SF3A1-205ENST00000463818 PCYT2Q99447 389 aa21.53■■□□□ 1.04
SF3A1-205ENST00000463818 TSPYL2Q9H2G4 693 aaPredicted RBP21.53■■□□□ 1.04
SF3A1-205ENST00000463818 CHD7Q9P2D1 2997 aa21.52■■□□□ 1.04
SF3A1-205ENST00000463818 REC8O95072 547 aa21.52■■□□□ 1.04
SF3A1-205ENST00000463818 CHRNA1P02708 482 aa21.52■■□□□ 1.04
SF3A1-205ENST00000463818 CENPBP07199 599 aaPredicted RBP21.52■■□□□ 1.04
SF3A1-205ENST00000463818 SCG2P13521 617 aa21.52■■□□□ 1.04
SF3A1-205ENST00000463818 PSMA5P28066 241 aa21.52■■□□□ 1.04
SF3A1-205ENST00000463818 ZNF76P36508 570 aa21.52■■□□□ 1.04
SF3A1-205ENST00000463818 SREBF1P36956 1147 aa21.52■■□□□ 1.04
SF3A1-205ENST00000463818 MRPS5P82675 430 aaKnown RBP21.52■■□□□ 1.04
SF3A1-205ENST00000463818 TAF2Q6P1X5 1199 aa21.52■■□□□ 1.04
SF3A1-205ENST00000463818 RPAINQ86UA6 219 aa21.52■■□□□ 1.04
SF3A1-205ENST00000463818 FBXL16Q8N461 479 aa21.52■■□□□ 1.04
SF3A1-205ENST00000463818 ASB2Q96Q27 587 aa21.52■■□□□ 1.04
SF3A1-205ENST00000463818 SDF4Q9BRK5 362 aa21.52■■□□□ 1.04
SF3A1-205ENST00000463818 AGO4Q9HCK5 861 aaKnown RBP21.52■■□□□ 1.04
SF3A1-205ENST00000463818 INSL6Q9Y581 213 aa21.52■■□□□ 1.04
SF3A1-205ENST00000463818 NFASCO94856 1347 aa21.52■■□□□ 1.03
SF3A1-205ENST00000463818 LINC01553A4QN01 128 aa21.51■■□□□ 1.03
SF3A1-205ENST00000463818 PRPF3O43395 683 aaKnown RBP21.51■■□□□ 1.03
SF3A1-205ENST00000463818 ACTR2P61160 394 aa21.51■■□□□ 1.03
SF3A1-205ENST00000463818 ERVK-21P61565 698 aa21.51■■□□□ 1.03
SF3A1-205ENST00000463818 ITGB3BPQ13352 177 aaPredicted RBP21.51■■□□□ 1.03
SF3A1-205ENST00000463818 MARCH8Q5T0T0 291 aa21.51■■□□□ 1.03
SF3A1-205ENST00000463818 TGS1Q96RS0 853 aaKnown RBP21.51■■□□□ 1.03
SF3A1-205ENST00000463818 AGXT2Q9BYV1 514 aa21.51■■□□□ 1.03
SF3A1-205ENST00000463818 AZI2Q9H6S1 392 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms