RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 KIR2DL2P43627 348 aaPredicted RBP4.81□□□□□ -1.64
SCFD1-204ENST00000463622 CRKLP46109 303 aaKnown RBP4.81□□□□□ -1.64
SCFD1-204ENST00000463622 HSF5Q4G112 596 aaPredicted RBP4.81□□□□□ -1.64
SCFD1-204ENST00000463622 HOMEZQ8IX15 550 aa4.81□□□□□ -1.64
SCFD1-204ENST00000463622 TMEM52Q8NDY8 209 aa4.81□□□□□ -1.64
SCFD1-204ENST00000463622 ZSCAN18Q8TBC5 510 aaPredicted RBP4.81□□□□□ -1.64
SCFD1-204ENST00000463622 FCRL2Q96LA5 508 aaPredicted RBP4.81□□□□□ -1.64
SCFD1-204ENST00000463622 IRF2BPLQ9H1B7 796 aa4.81□□□□□ -1.64
SCFD1-204ENST00000463622 KNSTRNQ9Y448 316 aa4.81□□□□□ -1.64
SCFD1-204ENST00000463622 KIF13BQ9NQT8 1826 aa4.81□□□□□ -1.64
SCFD1-204ENST00000463622 ANKRD26Q9UPS8 1709 aa4.81□□□□□ -1.64
SCFD1-204ENST00000463622 LTBP3Q9NS15 1303 aa4.81□□□□□ -1.64
SCFD1-204ENST00000463622 TAF1LQ8IZX4 1826 aa4.8□□□□□ -1.64
SCFD1-204ENST00000463622 NPC1L1Q9UHC9 1359 aa4.8□□□□□ -1.64
SCFD1-204ENST00000463622 OR14I1A6ND48 311 aa4.8□□□□□ -1.64
SCFD1-204ENST00000463622 ZNF205O95201 554 aa4.8□□□□□ -1.64
SCFD1-204ENST00000463622 GSTM1P09488 218 aa4.8□□□□□ -1.64
SCFD1-204ENST00000463622 IMPDH2P12268 514 aa4.8□□□□□ -1.64
SCFD1-204ENST00000463622 GUCY2CP25092 1073 aa4.8□□□□□ -1.64
SCFD1-204ENST00000463622 PPP2R1AP30153 589 aa4.8□□□□□ -1.64
SCFD1-204ENST00000463622 LINC00310P59036 64 aa4.8□□□□□ -1.64
SCFD1-204ENST00000463622 ZNF445P59923 1031 aa4.8□□□□□ -1.64
SCFD1-204ENST00000463622 SRSF3P84103 164 aaKnown RBP4.8□□□□□ -1.64
SCFD1-204ENST00000463622 HDLBPQ00341 1268 aaKnown RBP4.8□□□□□ -1.64
SCFD1-204ENST00000463622 NFIXQ14938 502 aa4.8□□□□□ -1.64
SCFD1-204ENST00000463622 RTP2Q5QGT7 225 aa4.8□□□□□ -1.64
SCFD1-204ENST00000463622 NOL9Q5SY16 702 aaKnown RBP4.8□□□□□ -1.64
SCFD1-204ENST00000463622 ZNF654Q8IZM8 581 aa4.8□□□□□ -1.64
SCFD1-204ENST00000463622 MRRFQ96E11 262 aaKnown RBP4.8□□□□□ -1.64
SCFD1-204ENST00000463622 TM9SF2Q99805 663 aa4.8□□□□□ -1.64
SCFD1-204ENST00000463622 GCM1Q9NP62 436 aa4.8□□□□□ -1.64
SCFD1-204ENST00000463622 PCDHB10Q9UN67 800 aa4.8□□□□□ -1.64
SCFD1-204ENST00000463622 ZNF451Q9Y4E5 1061 aa4.8□□□□□ -1.64
SCFD1-204ENST00000463622 LTN1O94822 1766 aa4.8□□□□□ -1.64
SCFD1-204ENST00000463622 COL3A1P02461 1466 aaPredicted RBP4.8□□□□□ -1.64
SCFD1-204ENST00000463622 UNCXA6NJT0 531 aa4.8□□□□□ -1.64
SCFD1-204ENST00000463622 RASSF10A6NK89 507 aa4.8□□□□□ -1.64
SCFD1-204ENST00000463622 NUAK1O60285 661 aa4.8□□□□□ -1.64
SCFD1-204ENST00000463622 HSP90AB1P08238 724 aaKnown RBP4.8□□□□□ -1.64
SCFD1-204ENST00000463622 LDHDQ86WU2 507 aa4.8□□□□□ -1.64
SCFD1-204ENST00000463622 NT5DC4Q86YG4 428 aa4.8□□□□□ -1.64
SCFD1-204ENST00000463622 GP6Q9HCN6 339 aa4.8□□□□□ -1.64
SCFD1-204ENST00000463622 KIAA1522Q9P206 1035 aaPredicted RBP4.8□□□□□ -1.64
SCFD1-204ENST00000463622 TNFRSF10DQ9UBN6 386 aa4.8□□□□□ -1.64
SCFD1-204ENST00000463622 DDNO94850 711 aaPredicted RBP4.79□□□□□ -1.64
SCFD1-204ENST00000463622 SERPINB2P05120 415 aa4.79□□□□□ -1.64
SCFD1-204ENST00000463622 PRKCAP17252 672 aa4.79□□□□□ -1.64
SCFD1-204ENST00000463622 CD247P20963 164 aa4.79□□□□□ -1.64
SCFD1-204ENST00000463622 MAP2K1Q02750 393 aaPredicted RBP4.79□□□□□ -1.64
SCFD1-204ENST00000463622 LCE1DQ5T752 114 aa4.79□□□□□ -1.64
SCFD1-204ENST00000463622 CIAPIN1Q6FI81 312 aa4.79□□□□□ -1.64
SCFD1-204ENST00000463622 JMJD8Q96S16 334 aa4.79□□□□□ -1.64
SCFD1-204ENST00000463622 CRBNQ96SW2 442 aa4.79□□□□□ -1.64
SCFD1-204ENST00000463622 SLC12A9Q9BXP2 914 aa4.79□□□□□ -1.64
SCFD1-204ENST00000463622 TAF1DQ9H5J8 278 aaPredicted RBP4.79□□□□□ -1.64
SCFD1-204ENST00000463622 NOL6Q9H6R4 1146 aaKnown RBP4.79□□□□□ -1.64
SCFD1-204ENST00000463622 POLKQ9UBT6 870 aa4.79□□□□□ -1.64
SCFD1-204ENST00000463622 NARFQ9UHQ1 456 aa4.79□□□□□ -1.64
SCFD1-204ENST00000463622 TAF6LQ9Y6J9 622 aa4.79□□□□□ -1.64
SCFD1-204ENST00000463622 C4AP0C0L4 1744 aa4.79□□□□□ -1.64
SCFD1-204ENST00000463622 TEX51A0A1B0GUA7 166 aa4.78□□□□□ -1.64
SCFD1-204ENST00000463622 H0YIN7 160 aa4.78□□□□□ -1.64
SCFD1-204ENST00000463622 PEX10O60683 326 aa4.78□□□□□ -1.64
SCFD1-204ENST00000463622 GSNP06396 782 aa4.78□□□□□ -1.64
SCFD1-204ENST00000463622 PNLIPP16233 465 aa4.78□□□□□ -1.64
SCFD1-204ENST00000463622 VIPR1P32241 457 aa4.78□□□□□ -1.64
SCFD1-204ENST00000463622 EPHB3P54753 998 aa4.78□□□□□ -1.64
SCFD1-204ENST00000463622 SSPNQ14714 243 aa4.78□□□□□ -1.64
SCFD1-204ENST00000463622 PPP2R5DQ14738 602 aa4.78□□□□□ -1.64
SCFD1-204ENST00000463622 DEFB115Q30KQ5 88 aa4.78□□□□□ -1.64
SCFD1-204ENST00000463622 SLCO6A1Q86UG4 719 aa4.78□□□□□ -1.64
SCFD1-204ENST00000463622 MORC1Q86VD1 984 aa4.78□□□□□ -1.64
SCFD1-204ENST00000463622 C2CD5Q86YS7 1000 aa4.78□□□□□ -1.64
SCFD1-204ENST00000463622 FIBCD1Q8N539 461 aa4.78□□□□□ -1.64
SCFD1-204ENST00000463622 TAB3Q8N5C8 712 aaPredicted RBP4.78□□□□□ -1.64
SCFD1-204ENST00000463622 RBBP8NLQ8NC74 664 aaPredicted RBP4.78□□□□□ -1.64
SCFD1-204ENST00000463622 NUP43Q8NFH3 380 aa4.78□□□□□ -1.64
SCFD1-204ENST00000463622 ADCY4Q8NFM4 1077 aa4.78□□□□□ -1.64
SCFD1-204ENST00000463622 PANK1Q8TE04 598 aa4.78□□□□□ -1.64
SCFD1-204ENST00000463622 ZDHHC15Q96MV8 337 aa4.78□□□□□ -1.64
SCFD1-204ENST00000463622 CRTAC1Q9NQ79 661 aa4.78□□□□□ -1.64
SCFD1-204ENST00000463622 IMPACTQ9P2X3 320 aa4.78□□□□□ -1.64
SCFD1-204ENST00000463622 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.78□□□□□ -1.64
SCFD1-204ENST00000463622 N4BP2Q86UW6 1770 aaPredicted RBP4.78□□□□□ -1.64
SCFD1-204ENST00000463622 SOS1Q07889 1333 aaPredicted RBP4.78□□□□□ -1.64
SCFD1-204ENST00000463622 IQCA1LA6NCM1 817 aa4.78□□□□□ -1.64
SCFD1-204ENST00000463622 CCDC85CA6NKD9 419 aa4.78□□□□□ -1.64
SCFD1-204ENST00000463622 NUDT19A8MXV4 375 aa4.78□□□□□ -1.64
SCFD1-204ENST00000463622 ANP32CO43423 234 aa4.78□□□□□ -1.64
SCFD1-204ENST00000463622 MSL3P1P0C860 447 aa4.78□□□□□ -1.64
SCFD1-204ENST00000463622 CYP19A1P11511 503 aaPredicted RBP4.78□□□□□ -1.64
SCFD1-204ENST00000463622 IFNGR1P15260 489 aa4.78□□□□□ -1.64
SCFD1-204ENST00000463622 VAMP1P23763 118 aa4.78□□□□□ -1.64
SCFD1-204ENST00000463622 EIF4A2Q14240 407 aaKnown RBP4.78□□□□□ -1.64
SCFD1-204ENST00000463622 GNPTABQ3T906 1256 aa4.78□□□□□ -1.64
SCFD1-204ENST00000463622 AMOTQ4VCS5 1084 aa4.78□□□□□ -1.64
SCFD1-204ENST00000463622 PLEKHO1Q53GL0 409 aaPredicted RBP4.78□□□□□ -1.64
SCFD1-204ENST00000463622 CWF19L1Q69YN2 538 aaKnown RBP4.78□□□□□ -1.64
SCFD1-204ENST00000463622 GALNT18Q6P9A2 607 aa4.78□□□□□ -1.64
SCFD1-204ENST00000463622 NAT16Q8N8M0 369 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms