RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 C11orf84Q9BUA3 381 aaPredicted RBP12.92□□□□□ -0.34
SSR3-202ENST00000463503 IFIH1Q9BYX4 1025 aaKnown RBP12.92□□□□□ -0.34
SSR3-202ENST00000463503 PNMA2Q9UL42 364 aa12.92□□□□□ -0.34
SSR3-202ENST00000463503 DENND4AQ7Z401 1863 aa12.91□□□□□ -0.34
SSR3-202ENST00000463503 B4DLN1 442 aa12.91□□□□□ -0.34
SSR3-202ENST00000463503 PROB1E7EW31 1015 aa12.91□□□□□ -0.34
SSR3-202ENST00000463503 RB1P06400 928 aa12.91□□□□□ -0.34
SSR3-202ENST00000463503 TOP1P11387 765 aaKnown RBP12.91□□□□□ -0.34
SSR3-202ENST00000463503 MRPL12P52815 198 aaKnown RBP12.91□□□□□ -0.34
SSR3-202ENST00000463503 ZNF543Q08ER8 600 aa12.91□□□□□ -0.34
SSR3-202ENST00000463503 ADAM15Q13444 863 aa12.91□□□□□ -0.34
SSR3-202ENST00000463503 USH1GQ495M9 461 aa12.91□□□□□ -0.34
SSR3-202ENST00000463503 MFSD6Q6ZSS7 791 aa12.91□□□□□ -0.34
SSR3-202ENST00000463503 TBC1D10CQ8IV04 446 aa12.91□□□□□ -0.34
SSR3-202ENST00000463503 SEPT8Q92599 483 aa12.91□□□□□ -0.34
SSR3-202ENST00000463503 C16orf70Q9BSU1 422 aa12.91□□□□□ -0.34
SSR3-202ENST00000463503 MTA3Q9BTC8 594 aa12.91□□□□□ -0.34
SSR3-202ENST00000463503 TM6SF1Q9BZW5 370 aa12.91□□□□□ -0.34
SSR3-202ENST00000463503 KRT23Q9C075 422 aa12.91□□□□□ -0.34
SSR3-202ENST00000463503 UPF2Q9HAU5 1272 aaKnown RBP12.91□□□□□ -0.34
SSR3-202ENST00000463503 CLEC1BQ9P126 229 aa12.91□□□□□ -0.34
SSR3-202ENST00000463503 E7EWF7 191 aa12.9□□□□□ -0.34
SSR3-202ENST00000463503 RANBP6O60518 1105 aaKnown RBP12.9□□□□□ -0.34
SSR3-202ENST00000463503 RGS20O76081 388 aa12.9□□□□□ -0.34
SSR3-202ENST00000463503 GLP2RO95838 553 aa12.9□□□□□ -0.34
SSR3-202ENST00000463503 CTSHP09668 335 aa12.9□□□□□ -0.34
SSR3-202ENST00000463503 BMPR1AP36894 532 aa12.9□□□□□ -0.34
SSR3-202ENST00000463503 HAND2P61296 217 aa12.9□□□□□ -0.34
SSR3-202ENST00000463503 SIGLEC14Q08ET2 396 aa12.9□□□□□ -0.34
SSR3-202ENST00000463503 LAMC2Q13753 1193 aa12.9□□□□□ -0.34
SSR3-202ENST00000463503 HSDL1Q3SXM5 330 aa12.9□□□□□ -0.34
SSR3-202ENST00000463503 ASCL5Q7RTU5 278 aa12.9□□□□□ -0.34
SSR3-202ENST00000463503 DHX37Q8IY37 1157 aaKnown RBP12.9□□□□□ -0.34
SSR3-202ENST00000463503 FIBCD1Q8N539 461 aa12.9□□□□□ -0.34
SSR3-202ENST00000463503 NSUN6Q8TEA1 469 aaKnown RBP12.9□□□□□ -0.34
SSR3-202ENST00000463503 CPVLQ9H3G5 476 aa12.9□□□□□ -0.34
SSR3-202ENST00000463503 TCP11L1Q9NUJ3 509 aa12.9□□□□□ -0.34
SSR3-202ENST00000463503 SNX14Q9Y5W7 946 aa12.9□□□□□ -0.34
SSR3-202ENST00000463503 NCOR2Q9Y618 2525 aa12.9□□□□□ -0.34
SSR3-202ENST00000463503 TREHO43280 583 aa12.89□□□□□ -0.35
SSR3-202ENST00000463503 CAND2O75155 1236 aa12.89□□□□□ -0.35
SSR3-202ENST00000463503 CSPG5O95196 566 aa12.89□□□□□ -0.35
SSR3-202ENST00000463503 HMGB1P09429 215 aaKnown RBP12.89□□□□□ -0.35
SSR3-202ENST00000463503 DNAJB1P25685 340 aa12.89□□□□□ -0.35
SSR3-202ENST00000463503 NDUFV1P49821 464 aa12.89□□□□□ -0.35
SSR3-202ENST00000463503 COASYQ13057 564 aa12.89□□□□□ -0.35
SSR3-202ENST00000463503 TRDNQ13061 729 aa12.89□□□□□ -0.35
SSR3-202ENST00000463503 STXBP2Q15833 593 aa12.89□□□□□ -0.35
SSR3-202ENST00000463503 MYSM1Q5VVJ2 828 aa12.89□□□□□ -0.35
SSR3-202ENST00000463503 STOX1Q6ZVD7 989 aa12.89□□□□□ -0.35
SSR3-202ENST00000463503 ADGRD2Q7Z7M1 963 aa12.89□□□□□ -0.35
SSR3-202ENST00000463503 RASEFQ8IZ41 740 aa12.89□□□□□ -0.35
SSR3-202ENST00000463503 NCOA7Q8NI08 942 aa12.89□□□□□ -0.35
SSR3-202ENST00000463503 ESR2Q92731 530 aa12.89□□□□□ -0.35
SSR3-202ENST00000463503 TBC1D32Q96NH3 1257 aa12.89□□□□□ -0.35
SSR3-202ENST00000463503 IWS1Q96ST2 819 aa12.89□□□□□ -0.35
SSR3-202ENST00000463503 RMDN3Q96TC7 470 aa12.89□□□□□ -0.35
SSR3-202ENST00000463503 C22orf23Q9BZE7 217 aa12.89□□□□□ -0.35
SSR3-202ENST00000463503 MAF1Q9H063 256 aa12.89□□□□□ -0.35
SSR3-202ENST00000463503 IGFLR1Q9H665 355 aa12.89□□□□□ -0.35
SSR3-202ENST00000463503 RWDD3Q9Y3V2 267 aa12.89□□□□□ -0.35
SSR3-202ENST00000463503 MRVI1Q9Y6F6 885 aa12.89□□□□□ -0.35
SSR3-202ENST00000463503 EP300Q09472 2414 aaPredicted RBP12.88□□□□□ -0.35
SSR3-202ENST00000463503 CEP250Q9BV73 2442 aa12.88□□□□□ -0.35
SSR3-202ENST00000463503 PRR23AA6NEV1 266 aa12.88□□□□□ -0.35
SSR3-202ENST00000463503 PPFIA4O75335 1185 aa12.88□□□□□ -0.35
SSR3-202ENST00000463503 EIF2AK2P19525 551 aaKnown RBP12.88□□□□□ -0.35
SSR3-202ENST00000463503 PSMA5P28066 241 aa12.88□□□□□ -0.35
SSR3-202ENST00000463503 AVPR2P30518 371 aa12.88□□□□□ -0.35
SSR3-202ENST00000463503 CCDC178Q5BJE1 867 aa12.88□□□□□ -0.35
SSR3-202ENST00000463503 FBXL16Q8N461 479 aa12.88□□□□□ -0.35
SSR3-202ENST00000463503 EFHBQ8N7U6 833 aa12.88□□□□□ -0.35
SSR3-202ENST00000463503 ATOH1Q92858 354 aaPredicted RBP12.88□□□□□ -0.35
SSR3-202ENST00000463503 APBB2Q92870 758 aa12.88□□□□□ -0.35
SSR3-202ENST00000463503 ATP6V0A1Q93050 837 aa12.88□□□□□ -0.35
SSR3-202ENST00000463503 ZNF689Q96CS4 500 aaPredicted RBP12.88□□□□□ -0.35
SSR3-202ENST00000463503 PXMP2Q9NR77 195 aa12.88□□□□□ -0.35
SSR3-202ENST00000463503 USP15Q9Y4E8 981 aaPredicted RBP12.88□□□□□ -0.35
SSR3-202ENST00000463503 TAF6LQ9Y6J9 622 aa12.88□□□□□ -0.35
SSR3-202ENST00000463503 BAZ2BQ9UIF8 2168 aaKnown RBP12.88□□□□□ -0.35
SSR3-202ENST00000463503 FANCMQ8IYD8 2048 aa12.88□□□□□ -0.35
SSR3-202ENST00000463503 ABCB11O95342 1321 aa12.88□□□□□ -0.35
SSR3-202ENST00000463503 NEDD4P46934 1319 aa12.88□□□□□ -0.35
SSR3-202ENST00000463503 C17orf102A2RUQ5 167 aa12.87□□□□□ -0.35
SSR3-202ENST00000463503 H0Y858 1186 aa12.87□□□□□ -0.35
SSR3-202ENST00000463503 OPLAHO14841 1288 aa12.87□□□□□ -0.35
SSR3-202ENST00000463503 EIF3JO75822 258 aaKnown RBP12.87□□□□□ -0.35
SSR3-202ENST00000463503 PDGFBP01127 241 aaPredicted RBP12.87□□□□□ -0.35
SSR3-202ENST00000463503 SMIM10L2AP0DMW4 78 aa12.87□□□□□ -0.35
SSR3-202ENST00000463503 SMIM10L2BP0DMW5 78 aa12.87□□□□□ -0.35
SSR3-202ENST00000463503 UBA1P22314 1058 aaKnown RBP12.87□□□□□ -0.35
SSR3-202ENST00000463503 ICAM3P32942 547 aa12.87□□□□□ -0.35
SSR3-202ENST00000463503 SP2Q02086 613 aa12.87□□□□□ -0.35
SSR3-202ENST00000463503 CDC37Q16543 378 aaPredicted RBP12.87□□□□□ -0.35
SSR3-202ENST00000463503 CELF3Q5SZQ8 465 aaKnown RBP12.87□□□□□ -0.35
SSR3-202ENST00000463503 ERMP1Q7Z2K6 904 aa12.87□□□□□ -0.35
SSR3-202ENST00000463503 MB21D2Q8IYB1 491 aaPredicted RBP12.87□□□□□ -0.35
SSR3-202ENST00000463503 NEK1Q96PY6 1258 aa12.87□□□□□ -0.35
SSR3-202ENST00000463503 TLR9Q9NR96 1032 aa12.87□□□□□ -0.35
SSR3-202ENST00000463503 BARX2Q9UMQ3 279 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms