RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 SETQ01105 290 aaPredicted RBP20.09■□□□□ 0.81
VPS52-214ENST00000463486 GDF6Q6KF10 455 aaPredicted RBP20.09■□□□□ 0.81
VPS52-214ENST00000463486 MOXD1Q6UVY6 613 aa20.09■□□□□ 0.81
VPS52-214ENST00000463486 PIK3AP1Q6ZUJ8 805 aa20.09■□□□□ 0.81
VPS52-214ENST00000463486 DIS3L2Q8IYB7 885 aaKnown RBP20.09■□□□□ 0.81
VPS52-214ENST00000463486 FBXO18Q8NFZ0 1043 aa20.09■□□□□ 0.81
VPS52-214ENST00000463486 SLC5A5Q92911 643 aa20.09■□□□□ 0.81
VPS52-214ENST00000463486 BADQ92934 168 aa20.09■□□□□ 0.81
VPS52-214ENST00000463486 NOC4LQ9BVI4 516 aaKnown RBP20.09■□□□□ 0.81
VPS52-214ENST00000463486 GTF2IRD1Q9UHL9 959 aa20.09■□□□□ 0.81
VPS52-214ENST00000463486 IGKV6D-21A0A0A0MT36 114 aa20.08■□□□□ 0.81
VPS52-214ENST00000463486 TLR3O15455 904 aaKnown RBP20.08■□□□□ 0.81
VPS52-214ENST00000463486 TIMP1P01033 207 aa20.08■□□□□ 0.81
VPS52-214ENST00000463486 MDM2Q00987 491 aaPredicted RBP20.08■□□□□ 0.81
VPS52-214ENST00000463486 GUCY1B3Q02153 619 aa20.08■□□□□ 0.81
VPS52-214ENST00000463486 PPP4R3AQ6IN85 833 aa20.08■□□□□ 0.81
VPS52-214ENST00000463486 ABHD15Q6UXT9 468 aa20.08■□□□□ 0.81
VPS52-214ENST00000463486 SDF4Q9BRK5 362 aa20.08■□□□□ 0.81
VPS52-214ENST00000463486 ZNF577Q9BSK1 485 aa20.08■□□□□ 0.81
VPS52-214ENST00000463486 KATNAL1Q9BW62 490 aa20.08■□□□□ 0.81
VPS52-214ENST00000463486 RNPEPQ9H4A4 650 aa20.08■□□□□ 0.81
VPS52-214ENST00000463486 TBC1D22BQ9NU19 505 aa20.08■□□□□ 0.81
VPS52-214ENST00000463486 PRKAG2Q9UGJ0 569 aa20.08■□□□□ 0.81
VPS52-214ENST00000463486 UMODL1Q5DID0 1318 aa20.07■□□□□ 0.8
VPS52-214ENST00000463486 CCDC194A0A1B0GVG4 234 aa20.07■□□□□ 0.8
VPS52-214ENST00000463486 SLC37A4O43826 429 aa20.07■□□□□ 0.8
VPS52-214ENST00000463486 CYP2C9P11712 490 aa20.07■□□□□ 0.8
VPS52-214ENST00000463486 CHMP4BP1P59074 171 aa20.07■□□□□ 0.8
VPS52-214ENST00000463486 CUL4AQ13619 759 aa20.07■□□□□ 0.8
VPS52-214ENST00000463486 FAM47CQ5HY64 1035 aa20.07■□□□□ 0.8
VPS52-214ENST00000463486 UTP14CQ5TAP6 766 aaKnown RBP20.07■□□□□ 0.8
VPS52-214ENST00000463486 B3GNT9Q6UX72 402 aa20.07■□□□□ 0.8
VPS52-214ENST00000463486 ETNPPLQ8TBG4 499 aa20.07■□□□□ 0.8
VPS52-214ENST00000463486 GJA10Q969M2 543 aa20.07■□□□□ 0.8
VPS52-214ENST00000463486 VWCEQ96DN2 955 aa20.07■□□□□ 0.8
VPS52-214ENST00000463486 C8orf76Q96K31 380 aa20.07■□□□□ 0.8
VPS52-214ENST00000463486 LAMA2P24043 3122 aaKnown RBP20.07■□□□□ 0.8
VPS52-214ENST00000463486 WNT7AO00755 349 aa20.06■□□□□ 0.8
VPS52-214ENST00000463486 SUPT20HL2P0C7V6 817 aa20.06■□□□□ 0.8
VPS52-214ENST00000463486 EPHB4P54760 987 aa20.06■□□□□ 0.8
VPS52-214ENST00000463486 ADAM17P78536 824 aa20.06■□□□□ 0.8
VPS52-214ENST00000463486 ZNF200P98182 395 aaPredicted RBP20.06■□□□□ 0.8
VPS52-214ENST00000463486 NEK8Q86SG6 692 aa20.06■□□□□ 0.8
VPS52-214ENST00000463486 C7orf31Q8N865 590 aa20.06■□□□□ 0.8
VPS52-214ENST00000463486 DHX38Q92620 1227 aaKnown RBP20.06■□□□□ 0.8
VPS52-214ENST00000463486 EMSYQ7Z589 1322 aa20.05■□□□□ 0.8
VPS52-214ENST00000463486 PSMD10O75832 226 aa20.05■□□□□ 0.8
VPS52-214ENST00000463486 SMIM10L2AP0DMW4 78 aa20.05■□□□□ 0.8
VPS52-214ENST00000463486 SMIM10L2BP0DMW5 78 aa20.05■□□□□ 0.8
VPS52-214ENST00000463486 RAG1P15918 1043 aa20.05■□□□□ 0.8
VPS52-214ENST00000463486 CYP2C18P33260 490 aa20.05■□□□□ 0.8
VPS52-214ENST00000463486 TRIM29Q14134 588 aa20.05■□□□□ 0.8
VPS52-214ENST00000463486 PTGISQ16647 500 aa20.05■□□□□ 0.8
VPS52-214ENST00000463486 LETM2Q2VYF4 491 aa20.05■□□□□ 0.8
VPS52-214ENST00000463486 MFSD5Q6N075 450 aa20.05■□□□□ 0.8
VPS52-214ENST00000463486 RIT2Q99578 217 aa20.05■□□□□ 0.8
VPS52-214ENST00000463486 WNT8AQ9H1J5 351 aa20.05■□□□□ 0.8
VPS52-214ENST00000463486 KCNMB3Q9NPA1 279 aa20.05■□□□□ 0.8
VPS52-214ENST00000463486 DDX39AO00148 427 aaKnown RBP20.04■□□□□ 0.8
VPS52-214ENST00000463486 TRIM71Q2Q1W2 868 aaKnown RBP20.04■□□□□ 0.8
VPS52-214ENST00000463486 ZNF746Q6NUN9 644 aaPredicted RBP20.04■□□□□ 0.8
VPS52-214ENST00000463486 C16orf59Q7L2K0 433 aa20.04■□□□□ 0.8
VPS52-214ENST00000463486 PLPPR4Q7Z2D5 763 aa20.04■□□□□ 0.8
VPS52-214ENST00000463486 HAS1Q92839 578 aa20.04■□□□□ 0.8
VPS52-214ENST00000463486 WNT8BQ93098 351 aa20.04■□□□□ 0.8
VPS52-214ENST00000463486 PPP1R12CQ9BZL4 782 aa20.04■□□□□ 0.8
VPS52-214ENST00000463486 HIPK3Q9H422 1215 aa20.04■□□□□ 0.8
VPS52-214ENST00000463486 SMARCAD1Q9H4L7 1026 aa20.04■□□□□ 0.8
VPS52-214ENST00000463486 BRMS1Q9HCU9 246 aa20.04■□□□□ 0.8
VPS52-214ENST00000463486 DDX25Q9UHL0 483 aaKnown RBP20.04■□□□□ 0.8
VPS52-214ENST00000463486 KIF28PB7ZC32 967 aa20.03■□□□□ 0.8
VPS52-214ENST00000463486 ATP4AP20648 1035 aa20.03■□□□□ 0.8
VPS52-214ENST00000463486 RBL2Q08999 1139 aa20.03■□□□□ 0.8
VPS52-214ENST00000463486 CCDC60Q8IWA6 550 aaPredicted RBP20.03■□□□□ 0.8
VPS52-214ENST00000463486 FAM184AQ8NB25 1140 aa20.03■□□□□ 0.8
VPS52-214ENST00000463486 AFAP1L1Q8TED9 768 aa20.03■□□□□ 0.8
VPS52-214ENST00000463486 LBHD1Q9BQE6 289 aaPredicted RBP20.03■□□□□ 0.8
VPS52-214ENST00000463486 FOXP1Q9H334 677 aaPredicted RBP20.03■□□□□ 0.8
VPS52-214ENST00000463486 SETD4Q9NVD3 440 aa20.03■□□□□ 0.8
VPS52-214ENST00000463486 ERAP1Q9NZ08 941 aa20.03■□□□□ 0.8
VPS52-214ENST00000463486 ZNF215Q9UL58 517 aaPredicted RBP20.03■□□□□ 0.8
VPS52-214ENST00000463486 TRIP12Q14669 1992 aaPredicted RBP20.03■□□□□ 0.8
VPS52-214ENST00000463486 SZT2Q5T011 3432 aa20.02■□□□□ 0.8
VPS52-214ENST00000463486 CCNT1O60563 726 aaKnown RBP20.02■□□□□ 0.8
VPS52-214ENST00000463486 GCFC2P16383 781 aaKnown RBP20.02■□□□□ 0.8
VPS52-214ENST00000463486 U2AF2P26368 475 aaKnown RBP eCLIP20.02■□□□□ 0.85e-8■■■■■ 34.6
VPS52-214ENST00000463486 GJB2P29033 226 aa20.02■□□□□ 0.8
VPS52-214ENST00000463486 KRT76Q01546 638 aa20.02■□□□□ 0.8
VPS52-214ENST00000463486 HABP4Q5JVS0 413 aaKnown RBP20.02■□□□□ 0.8
VPS52-214ENST00000463486 TRAF7Q6Q0C0 670 aa20.02■□□□□ 0.8
VPS52-214ENST00000463486 SERINC5Q86VE9 423 aa20.02■□□□□ 0.8
VPS52-214ENST00000463486 GLG1Q92896 1179 aa20.02■□□□□ 0.8
VPS52-214ENST00000463486 UBE2OQ9C0C9 1292 aaKnown RBP20.02■□□□□ 0.8
VPS52-214ENST00000463486 UNC45AQ9H3U1 944 aa20.02■□□□□ 0.8
VPS52-214ENST00000463486 A0A1W2PPC1 479 aa20.01■□□□□ 0.79
VPS52-214ENST00000463486 C17orf102A2RUQ5 167 aa20.01■□□□□ 0.79
VPS52-214ENST00000463486 PITPNM1O00562 1244 aa20.01■□□□□ 0.79
VPS52-214ENST00000463486 TREHO43280 583 aa20.01■□□□□ 0.79
VPS52-214ENST00000463486 CSF2RAP15509 400 aa20.01■□□□□ 0.79
VPS52-214ENST00000463486 MARK3P27448 753 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms