RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 KCNB2Q92953 911 aa25.36■■□□□ 1.65
PDLIM7-206ENST00000463411 SNX14Q9Y5W7 946 aa25.36■■□□□ 1.65
PDLIM7-206ENST00000463411 NRCAMQ92823 1304 aa25.36■■□□□ 1.65
PDLIM7-206ENST00000463411 CHD9Q3L8U1 2897 aa25.35■■□□□ 1.65
PDLIM7-206ENST00000463411 SMCO2A6NFE2 343 aa25.35■■□□□ 1.65
PDLIM7-206ENST00000463411 STXBP3O00186 592 aa25.35■■□□□ 1.65
PDLIM7-206ENST00000463411 CDC27P30260 824 aa25.35■■□□□ 1.65
PDLIM7-206ENST00000463411 DEFB103AP81534 67 aa25.35■■□□□ 1.65
PDLIM7-206ENST00000463411 AP3B2Q13367 1082 aa25.35■■□□□ 1.65
PDLIM7-206ENST00000463411 MBTPS1Q14703 1052 aa25.35■■□□□ 1.65
PDLIM7-206ENST00000463411 TYW1BQ6NUM6 668 aa25.35■■□□□ 1.65
PDLIM7-206ENST00000463411 LMBR1Q8WVP7 490 aa25.35■■□□□ 1.65
PDLIM7-206ENST00000463411 TELO2Q9Y4R8 837 aa25.35■■□□□ 1.65
PDLIM7-206ENST00000463411 CPA1P15085 419 aa25.34■■□□□ 1.65
PDLIM7-206ENST00000463411 PSMA5P28066 241 aa25.34■■□□□ 1.65
PDLIM7-206ENST00000463411 APOBRQ0VD83 1088 aa25.34■■□□□ 1.65
PDLIM7-206ENST00000463411 GLG1Q92896 1179 aa25.34■■□□□ 1.65
PDLIM7-206ENST00000463411 BRF1Q92994 677 aa25.34■■□□□ 1.65
PDLIM7-206ENST00000463411 MXRA8Q9BRK3 442 aa25.34■■□□□ 1.65
PDLIM7-206ENST00000463411 ANO3Q9BYT9 981 aa25.34■■□□□ 1.65
PDLIM7-206ENST00000463411 JPH1Q9HDC5 661 aaPredicted RBP25.34■■□□□ 1.65
PDLIM7-206ENST00000463411 ERAP1Q9NZ08 941 aa25.34■■□□□ 1.65
PDLIM7-206ENST00000463411 MICAL3Q7RTP6 2002 aa25.34■■□□□ 1.65
PDLIM7-206ENST00000463411 GTPBP6O43824 516 aaPredicted RBP25.33■■□□□ 1.65
PDLIM7-206ENST00000463411 CTSHP09668 335 aa25.33■■□□□ 1.65
PDLIM7-206ENST00000463411 TAP1Q03518 808 aa25.33■■□□□ 1.65
PDLIM7-206ENST00000463411 CCDC85BQ15834 202 aaPredicted RBP25.33■■□□□ 1.65
PDLIM7-206ENST00000463411 MICALL1Q8N3F8 863 aa25.33■■□□□ 1.65
PDLIM7-206ENST00000463411 ARNTL2Q8WYA1 636 aa25.33■■□□□ 1.65
PDLIM7-206ENST00000463411 SYMPKQ92797 1274 aaKnown RBP25.33■■□□□ 1.65
PDLIM7-206ENST00000463411 PGBD1Q96JS3 809 aa25.33■■□□□ 1.65
PDLIM7-206ENST00000463411 SDF4Q9BRK5 362 aa25.33■■□□□ 1.65
PDLIM7-206ENST00000463411 SMARCAD1Q9H4L7 1026 aa25.33■■□□□ 1.65
PDLIM7-206ENST00000463411 CERS4Q9HA82 394 aa25.33■■□□□ 1.65
PDLIM7-206ENST00000463411 FAM217BQ9NTX9 383 aaPredicted RBP25.33■■□□□ 1.65
PDLIM7-206ENST00000463411 CUL9Q8IWT3 2517 aa25.33■■□□□ 1.65
PDLIM7-206ENST00000463411 AMHP03971 560 aa25.32■■□□□ 1.64
PDLIM7-206ENST00000463411 RPS6KB1P23443 525 aa25.32■■□□□ 1.64
PDLIM7-206ENST00000463411 PPFIA1Q13136 1202 aa25.32■■□□□ 1.64
PDLIM7-206ENST00000463411 PFKFB3Q16875 520 aaPredicted RBP25.32■■□□□ 1.64
PDLIM7-206ENST00000463411 TCTN1Q2MV58 587 aa25.32■■□□□ 1.64
PDLIM7-206ENST00000463411 CCDC12Q8WUD4 166 aaPredicted RBP25.32■■□□□ 1.64
PDLIM7-206ENST00000463411 SEPT8Q92599 483 aa25.32■■□□□ 1.64
PDLIM7-206ENST00000463411 TSPYL2Q9H2G4 693 aaPredicted RBP25.32■■□□□ 1.64
PDLIM7-206ENST00000463411 KCNH7Q9NS40 1196 aa25.32■■□□□ 1.64
PDLIM7-206ENST00000463411 THEGQ9P2T0 379 aa25.32■■□□□ 1.64
PDLIM7-206ENST00000463411 SLC9A2Q9UBY0 812 aa25.32■■□□□ 1.64
PDLIM7-206ENST00000463411 COL4A4P53420 1690 aaPredicted RBP25.32■■□□□ 1.64
PDLIM7-206ENST00000463411 NID2Q14112 1375 aa25.31■■□□□ 1.64
PDLIM7-206ENST00000463411 A0A0C4DFX4 3053 aa25.31■■□□□ 1.64
PDLIM7-206ENST00000463411 GSTTP1A0A1W2PQM5 241 aa25.31■■□□□ 1.64
PDLIM7-206ENST00000463411 GJB5O95377 273 aa25.31■■□□□ 1.64
PDLIM7-206ENST00000463411 SCG2P13521 617 aa25.31■■□□□ 1.64
PDLIM7-206ENST00000463411 MARK3P27448 753 aa25.31■■□□□ 1.64
PDLIM7-206ENST00000463411 ADD1P35611 737 aaKnown RBP25.31■■□□□ 1.64
PDLIM7-206ENST00000463411 PLEKHG4Q58EX7 1191 aa25.31■■□□□ 1.64
PDLIM7-206ENST00000463411 TMCO2Q7Z6W1 182 aaPredicted RBP25.31■■□□□ 1.64
PDLIM7-206ENST00000463411 DBF4BQ8NFT6 615 aa25.31■■□□□ 1.64
PDLIM7-206ENST00000463411 RAD9AQ99638 391 aa25.31■■□□□ 1.64
PDLIM7-206ENST00000463411 AZI2Q9H6S1 392 aa25.31■■□□□ 1.64
PDLIM7-206ENST00000463411 ZNF76P36508 570 aa25.3■■□□□ 1.64
PDLIM7-206ENST00000463411 SREBF1P36956 1147 aa25.3■■□□□ 1.64
PDLIM7-206ENST00000463411 ADAM17P78536 824 aa25.3■■□□□ 1.64
PDLIM7-206ENST00000463411 AKAP17AQ02040 695 aaKnown RBP25.3■■□□□ 1.64
PDLIM7-206ENST00000463411 CEP55Q53EZ4 464 aa25.3■■□□□ 1.64
PDLIM7-206ENST00000463411 TJAP1Q5JTD0 557 aa25.3■■□□□ 1.64
PDLIM7-206ENST00000463411 TAF2Q6P1X5 1199 aa25.3■■□□□ 1.64
PDLIM7-206ENST00000463411 RSPH3Q86UC2 560 aa25.3■■□□□ 1.64
PDLIM7-206ENST00000463411 NFASCO94856 1347 aa25.3■■□□□ 1.64
PDLIM7-206ENST00000463411 CLK2P49760 499 aaKnown RBP25.29■■□□□ 1.64
PDLIM7-206ENST00000463411 GRIK4Q16099 956 aa25.29■■□□□ 1.64
PDLIM7-206ENST00000463411 MCTP2Q6DN12 878 aa25.29■■□□□ 1.64
PDLIM7-206ENST00000463411 FBXL16Q8N461 479 aa25.29■■□□□ 1.64
PDLIM7-206ENST00000463411 ATXN2LQ8WWM7 1075 aaKnown RBP25.29■■□□□ 1.64
PDLIM7-206ENST00000463411 TNPO1Q92973 898 aaKnown RBP25.29■■□□□ 1.64
PDLIM7-206ENST00000463411 PRDM6Q9NQX0 595 aa25.29■■□□□ 1.64
PDLIM7-206ENST00000463411 TMEM260Q9NX78 707 aa25.29■■□□□ 1.64
PDLIM7-206ENST00000463411 TUBE1Q9UJT0 475 aa25.29■■□□□ 1.64
PDLIM7-206ENST00000463411 PRUNE2Q8WUY3 3088 aa25.28■■□□□ 1.64
PDLIM7-206ENST00000463411 ESYT2A0FGR8 921 aa25.28■■□□□ 1.64
PDLIM7-206ENST00000463411 LCHNA4D1U4 455 aa25.28■■□□□ 1.64
PDLIM7-206ENST00000463411 RFXAPO00287 272 aa25.28■■□□□ 1.64
PDLIM7-206ENST00000463411 EPB41L2O43491 1005 aaKnown RBP25.28■■□□□ 1.64
PDLIM7-206ENST00000463411 ARHGEF15O94989 841 aa25.28■■□□□ 1.64
PDLIM7-206ENST00000463411 FAM117BQ6P1L5 589 aa25.28■■□□□ 1.64
PDLIM7-206ENST00000463411 MYOCDQ8IZQ8 938 aa25.28■■□□□ 1.64
PDLIM7-206ENST00000463411 APBB2Q92870 758 aa25.28■■□□□ 1.64
PDLIM7-206ENST00000463411 C6orf50Q9HD87 102 aa25.28■■□□□ 1.64
PDLIM7-206ENST00000463411 POU3F3P20264 500 aaPredicted RBP25.27■■□□□ 1.64
PDLIM7-206ENST00000463411 FAM26DQ5JW98 314 aa25.27■■□□□ 1.64
PDLIM7-206ENST00000463411 JAKMIP3Q5VZ66 844 aa25.27■■□□□ 1.64
PDLIM7-206ENST00000463411 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.27■■□□□ 1.64
PDLIM7-206ENST00000463411 NIPA1Q7RTP0 329 aa25.27■■□□□ 1.64
PDLIM7-206ENST00000463411 CYP2W1Q8TAV3 490 aa25.27■■□□□ 1.64
PDLIM7-206ENST00000463411 AGXT2Q9BYV1 514 aa25.27■■□□□ 1.64
PDLIM7-206ENST00000463411 AGO4Q9HCK5 861 aaKnown RBP25.27■■□□□ 1.64
PDLIM7-206ENST00000463411 CHD7Q9P2D1 2997 aa25.27■■□□□ 1.64
PDLIM7-206ENST00000463411 SIP14410 1827 aa25.26■■□□□ 1.63
PDLIM7-206ENST00000463411 EPOPA6NHQ4 379 aa25.26■■□□□ 1.63
PDLIM7-206ENST00000463411 RRN3P2A6NIE6 340 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms