RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 CCDC148Q8NFR7 591 aa10.12□□□□□ -0.79
LDB1-203ENST00000461873 ARNTL2Q8WYA1 636 aa10.12□□□□□ -0.79
LDB1-203ENST00000461873 C16orf70Q9BSU1 422 aa10.12□□□□□ -0.79
LDB1-203ENST00000461873 RNPEPQ9H4A4 650 aa10.12□□□□□ -0.79
LDB1-203ENST00000461873 JADE2Q9NQC1 790 aa10.12□□□□□ -0.79
LDB1-203ENST00000461873 SETD4Q9NVD3 440 aa10.12□□□□□ -0.79
LDB1-203ENST00000461873 BARHL2Q9NY43 387 aa10.12□□□□□ -0.79
LDB1-203ENST00000461873 TRPC6Q9Y210 931 aa10.12□□□□□ -0.79
LDB1-203ENST00000461873 TANC1Q9C0D5 1861 aa10.12□□□□□ -0.79
LDB1-203ENST00000461873 GBF1Q92538 1859 aa10.11□□□□□ -0.79
LDB1-203ENST00000461873 BACH1O14867 736 aa10.11□□□□□ -0.79
LDB1-203ENST00000461873 TREHO43280 583 aa10.11□□□□□ -0.79
LDB1-203ENST00000461873 CTSHP09668 335 aa10.11□□□□□ -0.79
LDB1-203ENST00000461873 HOXD8P13378 290 aaPredicted RBP10.11□□□□□ -0.79
LDB1-203ENST00000461873 MARK3P27448 753 aa10.11□□□□□ -0.79
LDB1-203ENST00000461873 HSPA4P34932 840 aa10.11□□□□□ -0.79
LDB1-203ENST00000461873 WDR5P61964 334 aaKnown RBP10.11□□□□□ -0.79
LDB1-203ENST00000461873 IGBP1P78318 339 aa10.11□□□□□ -0.79
LDB1-203ENST00000461873 ZNF200P98182 395 aaPredicted RBP10.11□□□□□ -0.79
LDB1-203ENST00000461873 RBL2Q08999 1139 aa10.11□□□□□ -0.79
LDB1-203ENST00000461873 APOBRQ0VD83 1088 aa10.11□□□□□ -0.79
LDB1-203ENST00000461873 PPFIA1Q13136 1202 aa10.11□□□□□ -0.79
LDB1-203ENST00000461873 AAK1Q2M2I8 961 aa10.11□□□□□ -0.79
LDB1-203ENST00000461873 ADCK5Q3MIX3 580 aa10.11□□□□□ -0.79
LDB1-203ENST00000461873 FAM160B1Q5W0V3 765 aa10.11□□□□□ -0.79
LDB1-203ENST00000461873 WWC2Q6AWC2 1192 aa10.11□□□□□ -0.79
LDB1-203ENST00000461873 FAM117BQ6P1L5 589 aa10.11□□□□□ -0.79
LDB1-203ENST00000461873 SERINC5Q86VE9 423 aa10.11□□□□□ -0.79
LDB1-203ENST00000461873 CKAP2LQ8IYA6 745 aa10.11□□□□□ -0.79
LDB1-203ENST00000461873 RASEFQ8IZ41 740 aa10.11□□□□□ -0.79
LDB1-203ENST00000461873 MYOCDQ8IZQ8 938 aa10.11□□□□□ -0.79
LDB1-203ENST00000461873 APBB2Q92870 758 aa10.11□□□□□ -0.79
LDB1-203ENST00000461873 MXRA8Q9BRK3 442 aa10.11□□□□□ -0.79
LDB1-203ENST00000461873 ANO3Q9BYT9 981 aa10.11□□□□□ -0.79
LDB1-203ENST00000461873 CERS4Q9HA82 394 aa10.11□□□□□ -0.79
LDB1-203ENST00000461873 SLC9A2Q9UBY0 812 aa10.11□□□□□ -0.79
LDB1-203ENST00000461873 BRPF3Q9ULD4 1205 aa10.11□□□□□ -0.79
LDB1-203ENST00000461873 YBX2Q9Y2T7 364 aaKnown RBP10.11□□□□□ -0.79
LDB1-203ENST00000461873 CYP46A1Q9Y6A2 500 aa10.11□□□□□ -0.79
LDB1-203ENST00000461873 CNTNAP5Q8WYK1 1306 aa10.1□□□□□ -0.79
LDB1-203ENST00000461873 RRN3P2A6NIE6 340 aa10.1□□□□□ -0.79
LDB1-203ENST00000461873 SCG2P13521 617 aa10.1□□□□□ -0.79
LDB1-203ENST00000461873 MYOGP15173 224 aa10.1□□□□□ -0.79
LDB1-203ENST00000461873 RPS6KB1P23443 525 aa10.1□□□□□ -0.79
LDB1-203ENST00000461873 PFKFB3Q16875 520 aaPredicted RBP10.1□□□□□ -0.79
LDB1-203ENST00000461873 CEP55Q53EZ4 464 aa10.1□□□□□ -0.79
LDB1-203ENST00000461873 IER5Q5VY09 327 aa10.1□□□□□ -0.79
LDB1-203ENST00000461873 JAKMIP3Q5VZ66 844 aa10.1□□□□□ -0.79
LDB1-203ENST00000461873 REXO1Q8N1G1 1221 aaKnown RBP10.1□□□□□ -0.79
LDB1-203ENST00000461873 DHX38Q92620 1227 aaKnown RBP10.1□□□□□ -0.79
LDB1-203ENST00000461873 YME1L1Q96TA2 773 aa10.1□□□□□ -0.79
LDB1-203ENST00000461873 RAD9AQ99638 391 aa10.1□□□□□ -0.79
LDB1-203ENST00000461873 SLC26A6Q9BXS9 759 aa10.1□□□□□ -0.79
LDB1-203ENST00000461873 KCNH7Q9NS40 1196 aa10.1□□□□□ -0.79
LDB1-203ENST00000461873 THEGQ9P2T0 379 aa10.1□□□□□ -0.79
LDB1-203ENST00000461873 TUBE1Q9UJT0 475 aa10.1□□□□□ -0.79
LDB1-203ENST00000461873 SAMM50Q9Y512 469 aa10.1□□□□□ -0.79
LDB1-203ENST00000461873 INSL6Q9Y581 213 aa10.1□□□□□ -0.79
LDB1-203ENST00000461873 SNX14Q9Y5W7 946 aa10.1□□□□□ -0.79
LDB1-203ENST00000461873 UBIAD1Q9Y5Z9 338 aa10.1□□□□□ -0.79
LDB1-203ENST00000461873 DOCK5Q9H7D0 1870 aa10.1□□□□□ -0.79
LDB1-203ENST00000461873 DDX39AO00148 427 aaKnown RBP10.09□□□□□ -0.79
LDB1-203ENST00000461873 STXBP3O00186 592 aa10.09□□□□□ -0.79
LDB1-203ENST00000461873 EPB41L2O43491 1005 aaKnown RBP10.09□□□□□ -0.79
LDB1-203ENST00000461873 NBNO60934 754 aa10.09□□□□□ -0.79
LDB1-203ENST00000461873 ATP9AO75110 1047 aa10.09□□□□□ -0.79
LDB1-203ENST00000461873 UPP2O95045 317 aa10.09□□□□□ -0.79
LDB1-203ENST00000461873 CXCL10P02778 98 aa10.09□□□□□ -0.79
LDB1-203ENST00000461873 CPA1P15085 419 aa10.09□□□□□ -0.79
LDB1-203ENST00000461873 KCNA2P16389 499 aa10.09□□□□□ -0.79
LDB1-203ENST00000461873 XBP1P17861 261 aa10.09□□□□□ -0.79
LDB1-203ENST00000461873 ITGB5P18084 799 aa10.09□□□□□ -0.79
LDB1-203ENST00000461873 ADD1P35611 737 aaKnown RBP10.09□□□□□ -0.79
LDB1-203ENST00000461873 SLC26A2P50443 739 aa10.09□□□□□ -0.79
LDB1-203ENST00000461873 STAT5BP51692 787 aa10.09□□□□□ -0.79
LDB1-203ENST00000461873 NLRP5P59047 1200 aa10.09□□□□□ -0.79
LDB1-203ENST00000461873 SETQ01105 290 aaPredicted RBP10.09□□□□□ -0.79
LDB1-203ENST00000461873 SSRP1Q08945 709 aaKnown RBP10.09□□□□□ -0.79
LDB1-203ENST00000461873 GRIK4Q16099 956 aa10.09□□□□□ -0.79
LDB1-203ENST00000461873 TJAP1Q5JTD0 557 aa10.09□□□□□ -0.79
LDB1-203ENST00000461873 MIS18BP1Q6P0N0 1132 aa10.09□□□□□ -0.79
LDB1-203ENST00000461873 RUFY3Q7L099 469 aa10.09□□□□□ -0.79
LDB1-203ENST00000461873 PLA2G4DQ86XP0 818 aa10.09□□□□□ -0.79
LDB1-203ENST00000461873 TRIM50Q86XT4 487 aa10.09□□□□□ -0.79
LDB1-203ENST00000461873 DBF4BQ8NFT6 615 aa10.09□□□□□ -0.79
LDB1-203ENST00000461873 LMBR1Q8WVP7 490 aa10.09□□□□□ -0.79
LDB1-203ENST00000461873 ATXN2LQ8WWM7 1075 aaKnown RBP10.09□□□□□ -0.79
LDB1-203ENST00000461873 PGBD1Q96JS3 809 aa10.09□□□□□ -0.79
LDB1-203ENST00000461873 C22orf23Q9BZE7 217 aa10.09□□□□□ -0.79
LDB1-203ENST00000461873 NFASCO94856 1347 aa10.08□□□□□ -0.8
LDB1-203ENST00000461873 PRPF3O43395 683 aaKnown RBP10.08□□□□□ -0.8
LDB1-203ENST00000461873 CDKL5O76039 1030 aa10.08□□□□□ -0.8
LDB1-203ENST00000461873 GJB5O95377 273 aa10.08□□□□□ -0.8
LDB1-203ENST00000461873 CDC27P30260 824 aa10.08□□□□□ -0.8
LDB1-203ENST00000461873 CCT2P78371 535 aaKnown RBP10.08□□□□□ -0.8
LDB1-203ENST00000461873 MRPS5P82675 430 aaKnown RBP10.08□□□□□ -0.8
LDB1-203ENST00000461873 SEMA3FQ13275 785 aa10.08□□□□□ -0.8
LDB1-203ENST00000461873 ODR4Q5SWX8 454 aa10.08□□□□□ -0.8
LDB1-203ENST00000461873 TGS1Q96RS0 853 aaKnown RBP10.08□□□□□ -0.8
LDB1-203ENST00000461873 ZNF577Q9BSK1 485 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms