RNA–Protein interactions for RNA: ENST00000461154.1

SHANK1-205, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 4

Gene SHANK1, Length 558 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-205ENST00000461154 HSP90AA1P07900 732 aaKnown RBP18.4■□□□□ 0.54
SHANK1-205ENST00000461154 ITGB3BPQ13352 177 aaPredicted RBP18.4■□□□□ 0.54
SHANK1-205ENST00000461154 EARS2Q5JPH6 523 aaKnown RBP18.4■□□□□ 0.54
SHANK1-205ENST00000461154 LARP1BQ659C4 914 aaKnown RBP18.4■□□□□ 0.54
SHANK1-205ENST00000461154 NOSTRINQ8IVI9 506 aa18.4■□□□□ 0.54
SHANK1-205ENST00000461154 TBX21Q9UL17 535 aa18.4■□□□□ 0.54
SHANK1-205ENST00000461154 DNAH12Q6ZR08 3092 aa18.39■□□□□ 0.54
SHANK1-205ENST00000461154 FAM205CA6NFA0 338 aa18.39■□□□□ 0.53
SHANK1-205ENST00000461154 SUPT20HL2P0C7V6 817 aa18.39■□□□□ 0.53
SHANK1-205ENST00000461154 PTPN11Q06124 597 aaPredicted RBP18.39■□□□□ 0.53
SHANK1-205ENST00000461154 NBPF20Q3BBV1 942 aa18.39■□□□□ 0.53
SHANK1-205ENST00000461154 NFRKBQ6P4R8 1299 aa18.39■□□□□ 0.53
SHANK1-205ENST00000461154 BADQ92934 168 aa18.39■□□□□ 0.53
SHANK1-205ENST00000461154 RIT2Q99578 217 aa18.39■□□□□ 0.53
SHANK1-205ENST00000461154 ZNF215Q9UL58 517 aaPredicted RBP18.39■□□□□ 0.53
SHANK1-205ENST00000461154 NOL7Q9UMY1 257 aaKnown RBP18.39■□□□□ 0.53
SHANK1-205ENST00000461154 SCN10AQ9Y5Y9 1956 aa18.39■□□□□ 0.53
SHANK1-205ENST00000461154 MSH4O15457 936 aa18.38■□□□□ 0.53
SHANK1-205ENST00000461154 F2P00734 622 aa18.38■□□□□ 0.53
SHANK1-205ENST00000461154 TIMP1P01033 207 aa18.38■□□□□ 0.53
SHANK1-205ENST00000461154 LGALS2P05162 132 aa18.38■□□□□ 0.53
SHANK1-205ENST00000461154 ZNF286BP0CG31 522 aa18.38■□□□□ 0.53
SHANK1-205ENST00000461154 U2AF2P26368 475 aaKnown RBP eCLIP18.38■□□□□ 0.53
SHANK1-205ENST00000461154 TCF7P36402 384 aaPredicted RBP18.38■□□□□ 0.53
SHANK1-205ENST00000461154 KRT76Q01546 638 aa18.38■□□□□ 0.53
SHANK1-205ENST00000461154 MCTP1Q6DN14 999 aa18.38■□□□□ 0.53
SHANK1-205ENST00000461154 GSTTP1A0A1W2PQM5 241 aa18.37■□□□□ 0.53
SHANK1-205ENST00000461154 DDX39AO00148 427 aaKnown RBP18.37■□□□□ 0.53
SHANK1-205ENST00000461154 TBX3O15119 743 aa18.37■□□□□ 0.53
SHANK1-205ENST00000461154 DHX15O43143 795 aaKnown RBP18.37■□□□□ 0.53
SHANK1-205ENST00000461154 MARCH6O60337 910 aa18.37■□□□□ 0.53
SHANK1-205ENST00000461154 B4GALT4O60513 344 aa18.37■□□□□ 0.53
SHANK1-205ENST00000461154 GAS7O60861 476 aa18.37■□□□□ 0.53
SHANK1-205ENST00000461154 TRAPPC10P48553 1259 aa18.37■□□□□ 0.53
SHANK1-205ENST00000461154 PSEN2P49810 448 aa18.37■□□□□ 0.53
SHANK1-205ENST00000461154 CHMP4BP1P59074 171 aa18.37■□□□□ 0.53
SHANK1-205ENST00000461154 ACTR2P61160 394 aa18.37■□□□□ 0.53
SHANK1-205ENST00000461154 MFSD10Q14728 455 aa18.37■□□□□ 0.53
SHANK1-205ENST00000461154 FAM47CQ5HY64 1035 aa18.37■□□□□ 0.53
SHANK1-205ENST00000461154 UTP14CQ5TAP6 766 aaKnown RBP18.37■□□□□ 0.53
SHANK1-205ENST00000461154 LRCH2Q5VUJ6 765 aa18.37■□□□□ 0.53
SHANK1-205ENST00000461154 ZNF746Q6NUN9 644 aaPredicted RBP18.37■□□□□ 0.53
SHANK1-205ENST00000461154 SMAP1Q8IYB5 467 aaPredicted RBP18.37■□□□□ 0.53
SHANK1-205ENST00000461154 TDHQ8IZJ6 230 aa18.37■□□□□ 0.53
SHANK1-205ENST00000461154 KAT2BQ92831 832 aa18.37■□□□□ 0.53
SHANK1-205ENST00000461154 SLC5A5Q92911 643 aa18.37■□□□□ 0.53
SHANK1-205ENST00000461154 FAM20AQ96MK3 541 aa18.37■□□□□ 0.53
SHANK1-205ENST00000461154 C16orf70Q9BSU1 422 aa18.37■□□□□ 0.53
SHANK1-205ENST00000461154 TEKT3Q9BXF9 490 aa18.37■□□□□ 0.53
SHANK1-205ENST00000461154 TRPV6Q9H1D0 765 aa18.37■□□□□ 0.53
SHANK1-205ENST00000461154 H3BRB1 525 aa18.36■□□□□ 0.53
SHANK1-205ENST00000461154 SLC37A4O43826 429 aa18.36■□□□□ 0.53
SHANK1-205ENST00000461154 BAG4O95429 457 aaKnown RBP18.36■□□□□ 0.53
SHANK1-205ENST00000461154 ITGB8P26012 769 aa18.36■□□□□ 0.53
SHANK1-205ENST00000461154 ORC2Q13416 577 aaPredicted RBP18.36■□□□□ 0.53
SHANK1-205ENST00000461154 KIAA0753Q2KHM9 967 aa18.36■□□□□ 0.53
SHANK1-205ENST00000461154 MIS18BP1Q6P0N0 1132 aa18.36■□□□□ 0.53
SHANK1-205ENST00000461154 EMSYQ7Z589 1322 aa18.36■□□□□ 0.53
SHANK1-205ENST00000461154 ETNPPLQ8TBG4 499 aa18.36■□□□□ 0.53
SHANK1-205ENST00000461154 UIMC1Q96RL1 719 aa18.36■□□□□ 0.53
SHANK1-205ENST00000461154 SMARCAD1Q9H4L7 1026 aa18.36■□□□□ 0.53
SHANK1-205ENST00000461154 TUT1Q9H6E5 874 aaKnown RBP18.36■□□□□ 0.53
SHANK1-205ENST00000461154 AZI2Q9H6S1 392 aa18.36■□□□□ 0.53
SHANK1-205ENST00000461154 KIF28PB7ZC32 967 aa18.35■□□□□ 0.53
SHANK1-205ENST00000461154 HAS3O00219 553 aa18.35■□□□□ 0.53
SHANK1-205ENST00000461154 NEMFO60524 1076 aa18.35■□□□□ 0.53
SHANK1-205ENST00000461154 CCNE2O96020 404 aa18.35■□□□□ 0.53
SHANK1-205ENST00000461154 FPGSQ05932 587 aa18.35■□□□□ 0.53
SHANK1-205ENST00000461154 MFSD5Q6N075 450 aa18.35■□□□□ 0.53
SHANK1-205ENST00000461154 SESTD1Q86VW0 696 aa18.35■□□□□ 0.53
SHANK1-205ENST00000461154 SLFN12Q8IYM2 578 aa18.35■□□□□ 0.53
SHANK1-205ENST00000461154 C7orf31Q8N865 590 aa18.35■□□□□ 0.53
SHANK1-205ENST00000461154 GLG1Q92896 1179 aa18.35■□□□□ 0.53
SHANK1-205ENST00000461154 KCNMB3Q9NPA1 279 aa18.35■□□□□ 0.53
SHANK1-205ENST00000461154 FOXD4L1Q9NU39 408 aa18.35■□□□□ 0.53
SHANK1-205ENST00000461154 ERAP1Q9NZ08 941 aa18.35■□□□□ 0.53
SHANK1-205ENST00000461154 TELO2Q9Y4R8 837 aa18.35■□□□□ 0.53
SHANK1-205ENST00000461154 VPS37CA5D8V6 355 aaPredicted RBP18.34■□□□□ 0.53
SHANK1-205ENST00000461154 WDR64B1ANS9 1081 aa18.34■□□□□ 0.53
SHANK1-205ENST00000461154 LGR5O75473 907 aa18.34■□□□□ 0.53
SHANK1-205ENST00000461154 PSMD10O75832 226 aa18.34■□□□□ 0.53
SHANK1-205ENST00000461154 ATG7O95352 703 aa18.34■□□□□ 0.53
SHANK1-205ENST00000461154 ATP2B1P20020 1258 aa18.34■□□□□ 0.53
SHANK1-205ENST00000461154 SFNP31947 248 aa18.34■□□□□ 0.53
SHANK1-205ENST00000461154 FAM160B1Q5W0V3 765 aa18.34■□□□□ 0.53
SHANK1-205ENST00000461154 POTEDQ86YR6 584 aa18.34■□□□□ 0.53
SHANK1-205ENST00000461154 TMEM199Q8N511 208 aa18.34■□□□□ 0.53
SHANK1-205ENST00000461154 PPP1R12CQ9BZL4 782 aa18.34■□□□□ 0.53
SHANK1-205ENST00000461154 HIPK3Q9H422 1215 aa18.34■□□□□ 0.53
SHANK1-205ENST00000461154 TRMT13Q9NUP7 481 aaKnown RBP18.34■□□□□ 0.53
SHANK1-205ENST00000461154 SAMM50Q9Y512 469 aa18.34■□□□□ 0.53
SHANK1-205ENST00000461154 BACH1O14867 736 aa18.33■□□□□ 0.52
SHANK1-205ENST00000461154 PSAPP07602 524 aa18.33■□□□□ 0.52
SHANK1-205ENST00000461154 SYT1P21579 422 aa18.33■□□□□ 0.52
SHANK1-205ENST00000461154 SLC26A2P50443 739 aa18.33■□□□□ 0.52
SHANK1-205ENST00000461154 JAK3P52333 1124 aa18.33■□□□□ 0.52
SHANK1-205ENST00000461154 BECN1Q14457 450 aa18.33■□□□□ 0.52
SHANK1-205ENST00000461154 CALCRLQ16602 461 aa18.33■□□□□ 0.52
SHANK1-205ENST00000461154 TTC38Q5R3I4 469 aa18.33■□□□□ 0.52
SHANK1-205ENST00000461154 ABHD15Q6UXT9 468 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms