RNA–Protein interactions for RNA: ENST00000461043.6

ERGIC3-211, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-211ENST00000461043 ACTR2P61160 394 aa13.74□□□□□ -0.21
ERGIC3-211ENST00000461043 SP4Q02446 784 aa13.74□□□□□ -0.21
ERGIC3-211ENST00000461043 PTPN11Q06124 597 aaPredicted RBP13.74□□□□□ -0.21
ERGIC3-211ENST00000461043 FAAP100Q0VG06 881 aa13.74□□□□□ -0.21
ERGIC3-211ENST00000461043 MFSD10Q14728 455 aa13.74□□□□□ -0.21
ERGIC3-211ENST00000461043 ZNF746Q6NUN9 644 aaPredicted RBP13.74□□□□□ -0.21
ERGIC3-211ENST00000461043 ABHD15Q6UXT9 468 aa13.74□□□□□ -0.21
ERGIC3-211ENST00000461043 VTI1AQ96AJ9 217 aa13.74□□□□□ -0.21
ERGIC3-211ENST00000461043 PCYT2Q99447 389 aa13.74□□□□□ -0.21
ERGIC3-211ENST00000461043 KATNAL1Q9BW62 490 aa13.74□□□□□ -0.21
ERGIC3-211ENST00000461043 PDLIM7Q9NR12 457 aa13.74□□□□□ -0.21
ERGIC3-211ENST00000461043 TBX21Q9UL17 535 aa13.74□□□□□ -0.21
ERGIC3-211ENST00000461043 H3BRB1 525 aa13.73□□□□□ -0.21
ERGIC3-211ENST00000461043 TBX3O15119 743 aa13.73□□□□□ -0.21
ERGIC3-211ENST00000461043 CCNT1O60563 726 aaKnown RBP13.73□□□□□ -0.21
ERGIC3-211ENST00000461043 KRT76Q01546 638 aa13.73□□□□□ -0.21
ERGIC3-211ENST00000461043 KIAA0753Q2KHM9 967 aa13.73□□□□□ -0.21
ERGIC3-211ENST00000461043 TRIM50Q86XT4 487 aa13.73□□□□□ -0.21
ERGIC3-211ENST00000461043 POTEDQ86YR6 584 aa13.73□□□□□ -0.21
ERGIC3-211ENST00000461043 HSCBQ8IWL3 235 aa13.73□□□□□ -0.21
ERGIC3-211ENST00000461043 HAS1Q92839 578 aa13.73□□□□□ -0.21
ERGIC3-211ENST00000461043 GJA10Q969M2 543 aa13.73□□□□□ -0.21
ERGIC3-211ENST00000461043 UIMC1Q96RL1 719 aa13.73□□□□□ -0.21
ERGIC3-211ENST00000461043 CTAGE1Q96RT6 745 aa13.73□□□□□ -0.21
ERGIC3-211ENST00000461043 TUT1Q9H6E5 874 aaKnown RBP13.73□□□□□ -0.21
ERGIC3-211ENST00000461043 VAV3Q9UKW4 847 aa13.73□□□□□ -0.21
ERGIC3-211ENST00000461043 NR2E3Q9Y5X4 410 aa13.73□□□□□ -0.21
ERGIC3-211ENST00000461043 TRIM43BA6NCK2 446 aa13.72□□□□□ -0.21
ERGIC3-211ENST00000461043 H0YGN5 161 aa13.72□□□□□ -0.21
ERGIC3-211ENST00000461043 DDX39AO00148 427 aaKnown RBP13.72□□□□□ -0.21
ERGIC3-211ENST00000461043 KIAA0355O15063 1070 aa13.72□□□□□ -0.21
ERGIC3-211ENST00000461043 B4GALT4O60513 344 aa13.72□□□□□ -0.21
ERGIC3-211ENST00000461043 CLTBP09497 229 aa13.72□□□□□ -0.21
ERGIC3-211ENST00000461043 SUPT20HL2P0C7V6 817 aa13.72□□□□□ -0.21
ERGIC3-211ENST00000461043 TRAPPC10P48553 1259 aa13.72□□□□□ -0.21
ERGIC3-211ENST00000461043 HIC1Q14526 733 aa13.72□□□□□ -0.21
ERGIC3-211ENST00000461043 LRCH2Q5VUJ6 765 aa13.72□□□□□ -0.21
ERGIC3-211ENST00000461043 LARP1BQ659C4 914 aaKnown RBP13.72□□□□□ -0.21
ERGIC3-211ENST00000461043 SH3RF1Q7Z6J0 888 aa13.72□□□□□ -0.21
ERGIC3-211ENST00000461043 SMAP1Q8IYB5 467 aaPredicted RBP13.72□□□□□ -0.21
ERGIC3-211ENST00000461043 AFAP1L1Q8TED9 768 aa13.72□□□□□ -0.21
ERGIC3-211ENST00000461043 PPP1R13LQ8WUF5 828 aa13.72□□□□□ -0.21
ERGIC3-211ENST00000461043 TRIM43Q96BQ3 446 aaPredicted RBP13.72□□□□□ -0.21
ERGIC3-211ENST00000461043 FAM20AQ96MK3 541 aa13.72□□□□□ -0.21
ERGIC3-211ENST00000461043 TRPV6Q9H1D0 765 aa13.72□□□□□ -0.21
ERGIC3-211ENST00000461043 GTF2IRD1Q9UHL9 959 aa13.72□□□□□ -0.21
ERGIC3-211ENST00000461043 DCDC2CA8MYV0 355 aa13.71□□□□□ -0.21
ERGIC3-211ENST00000461043 GAS7O60861 476 aa13.71□□□□□ -0.21
ERGIC3-211ENST00000461043 PDCP20941 246 aa13.71□□□□□ -0.21
ERGIC3-211ENST00000461043 TOB1P50616 345 aaPredicted RBP13.71□□□□□ -0.21
ERGIC3-211ENST00000461043 ORC2Q13416 577 aaPredicted RBP13.71□□□□□ -0.21
ERGIC3-211ENST00000461043 UTP14CQ5TAP6 766 aaKnown RBP13.71□□□□□ -0.21
ERGIC3-211ENST00000461043 GDF6Q6KF10 455 aaPredicted RBP13.71□□□□□ -0.21
ERGIC3-211ENST00000461043 PLPPR4Q7Z2D5 763 aa13.71□□□□□ -0.21
ERGIC3-211ENST00000461043 CCDC60Q8IWA6 550 aaPredicted RBP13.71□□□□□ -0.21
ERGIC3-211ENST00000461043 MTMR9Q96QG7 549 aa13.71□□□□□ -0.21
ERGIC3-211ENST00000461043 TEKT3Q9BXF9 490 aa13.71□□□□□ -0.21
ERGIC3-211ENST00000461043 UNC45AQ9H3U1 944 aa13.71□□□□□ -0.21
ERGIC3-211ENST00000461043 SMARCAD1Q9H4L7 1026 aa13.71□□□□□ -0.21
ERGIC3-211ENST00000461043 TRMT13Q9NUP7 481 aaKnown RBP13.71□□□□□ -0.21
ERGIC3-211ENST00000461043 ERAP1Q9NZ08 941 aa13.71□□□□□ -0.21
ERGIC3-211ENST00000461043 HDAC6Q9UBN7 1215 aa13.71□□□□□ -0.21
ERGIC3-211ENST00000461043 ZNF215Q9UL58 517 aaPredicted RBP13.71□□□□□ -0.21
ERGIC3-211ENST00000461043 LTBP2Q14767 1821 aa13.7□□□□□ -0.22
ERGIC3-211ENST00000461043 WDR64B1ANS9 1081 aa13.7□□□□□ -0.22
ERGIC3-211ENST00000461043 H3BQV1 296 aa13.7□□□□□ -0.22
ERGIC3-211ENST00000461043 NEMFO60524 1076 aa13.7□□□□□ -0.22
ERGIC3-211ENST00000461043 SMIM10L2AP0DMW4 78 aa13.7□□□□□ -0.22
ERGIC3-211ENST00000461043 SMIM10L2BP0DMW5 78 aa13.7□□□□□ -0.22
ERGIC3-211ENST00000461043 SYT1P21579 422 aa13.7□□□□□ -0.22
ERGIC3-211ENST00000461043 ITGB8P26012 769 aa13.7□□□□□ -0.22
ERGIC3-211ENST00000461043 ADAM17P78536 824 aa13.7□□□□□ -0.22
ERGIC3-211ENST00000461043 SPIRE1Q08AE8 756 aa13.7□□□□□ -0.22
ERGIC3-211ENST00000461043 PPP2R5CQ13362 524 aa13.7□□□□□ -0.22
ERGIC3-211ENST00000461043 PRPF38BQ5VTL8 546 aaKnown RBP13.7□□□□□ -0.22
ERGIC3-211ENST00000461043 C7orf31Q8N865 590 aa13.7□□□□□ -0.22
ERGIC3-211ENST00000461043 C4orf32Q8N8J7 132 aa13.7□□□□□ -0.22
ERGIC3-211ENST00000461043 RDM1Q8NG50 284 aa13.7□□□□□ -0.22
ERGIC3-211ENST00000461043 TMEM60Q9H2L4 133 aa13.7□□□□□ -0.22
ERGIC3-211ENST00000461043 RNPEPQ9H4A4 650 aa13.7□□□□□ -0.22
ERGIC3-211ENST00000461043 PCDH10Q9P2E7 1040 aa13.7□□□□□ -0.22
ERGIC3-211ENST00000461043 ZMYND8Q9ULU4 1186 aaPredicted RBP13.7□□□□□ -0.22
ERGIC3-211ENST00000461043 PCDHA10Q9Y5I2 948 aa13.7□□□□□ -0.22
ERGIC3-211ENST00000461043 MAFBQ9Y5Q3 323 aaPredicted RBP13.7□□□□□ -0.22
ERGIC3-211ENST00000461043 IGSF9BQ9UPX0 1349 aa13.69□□□□□ -0.22
ERGIC3-211ENST00000461043 TLR3O15455 904 aaKnown RBP13.69□□□□□ -0.22
ERGIC3-211ENST00000461043 SYN1P17600 705 aa13.69□□□□□ -0.22
ERGIC3-211ENST00000461043 ATP4AP20648 1035 aa13.69□□□□□ -0.22
ERGIC3-211ENST00000461043 SFNP31947 248 aa13.69□□□□□ -0.22
ERGIC3-211ENST00000461043 SLC26A2P50443 739 aa13.69□□□□□ -0.22
ERGIC3-211ENST00000461043 STAT5BP51692 787 aa13.69□□□□□ -0.22
ERGIC3-211ENST00000461043 JAK3P52333 1124 aa13.69□□□□□ -0.22
ERGIC3-211ENST00000461043 GNL2Q13823 731 aaKnown RBP13.69□□□□□ -0.22
ERGIC3-211ENST00000461043 FAM47CQ5HY64 1035 aa13.69□□□□□ -0.22
ERGIC3-211ENST00000461043 TTC38Q5R3I4 469 aa13.69□□□□□ -0.22
ERGIC3-211ENST00000461043 MIS18BP1Q6P0N0 1132 aa13.69□□□□□ -0.22
ERGIC3-211ENST00000461043 SLFN12Q8IYM2 578 aa13.69□□□□□ -0.22
ERGIC3-211ENST00000461043 GLG1Q92896 1179 aa13.69□□□□□ -0.22
ERGIC3-211ENST00000461043 PRO3102Q9H379 93 aa13.69□□□□□ -0.22
ERGIC3-211ENST00000461043 DISC1Q9NRI5 854 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms