RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 PPM1BO75688 479 aa6.07□□□□□ -1.44
SF3A3-202ENST00000460925 ITGAVP06756 1048 aa6.07□□□□□ -1.44
SF3A3-202ENST00000460925 RAB6AP20340 208 aa6.07□□□□□ -1.44
SF3A3-202ENST00000460925 LORP23490 312 aaPredicted RBP6.07□□□□□ -1.44
SF3A3-202ENST00000460925 NOS3P29474 1203 aa6.07□□□□□ -1.44
SF3A3-202ENST00000460925 RFC4P35249 363 aa6.07□□□□□ -1.44
SF3A3-202ENST00000460925 PPP2R2AP63151 447 aa6.07□□□□□ -1.44
SF3A3-202ENST00000460925 AMPD3Q01432 767 aa6.07□□□□□ -1.44
SF3A3-202ENST00000460925 OS9Q13438 667 aaPredicted RBP6.07□□□□□ -1.44
SF3A3-202ENST00000460925 MAP7Q14244 749 aa6.07□□□□□ -1.44
SF3A3-202ENST00000460925 KSR2Q6VAB6 950 aa6.07□□□□□ -1.44
SF3A3-202ENST00000460925 PODNQ7Z5L7 613 aa6.07□□□□□ -1.44
SF3A3-202ENST00000460925 ALYREFQ86V81 257 aaKnown RBP6.07□□□□□ -1.44
SF3A3-202ENST00000460925 DZIP1LQ8IYY4 767 aaKnown RBP6.07□□□□□ -1.44
SF3A3-202ENST00000460925 ARHGEF39Q8N4T4 335 aa6.07□□□□□ -1.44
SF3A3-202ENST00000460925 LRRN4CLQ8ND94 238 aa6.07□□□□□ -1.44
SF3A3-202ENST00000460925 PLBD2Q8NHP8 589 aa6.07□□□□□ -1.44
SF3A3-202ENST00000460925 WFDC12Q8WWY7 111 aa6.07□□□□□ -1.44
SF3A3-202ENST00000460925 MFSD3Q96ES6 412 aa6.07□□□□□ -1.44
SF3A3-202ENST00000460925 COX4I2Q96KJ9 171 aa6.07□□□□□ -1.44
SF3A3-202ENST00000460925 ZNF512BQ96KM6 892 aaPredicted RBP6.07□□□□□ -1.44
SF3A3-202ENST00000460925 MYRFLQ96LU7 910 aa6.07□□□□□ -1.44
SF3A3-202ENST00000460925 MEIS3Q99687 375 aa6.07□□□□□ -1.44
SF3A3-202ENST00000460925 MRPL4Q9BYD3 311 aaKnown RBP6.07□□□□□ -1.44
SF3A3-202ENST00000460925 GP6Q9HCN6 339 aa6.07□□□□□ -1.44
SF3A3-202ENST00000460925 EMC9Q9Y3B6 208 aa6.07□□□□□ -1.44
SF3A3-202ENST00000460925 MRPS23Q9Y3D9 190 aaKnown RBP6.07□□□□□ -1.44
SF3A3-202ENST00000460925 NRXN2Q9P2S2 1712 aa6.07□□□□□ -1.44
SF3A3-202ENST00000460925 CARMIL3Q8ND23 1372 aa6.06□□□□□ -1.44
SF3A3-202ENST00000460925 ABCC12Q96J65 1359 aa6.06□□□□□ -1.44
SF3A3-202ENST00000460925 ZBTB7AO95365 584 aa6.06□□□□□ -1.44
SF3A3-202ENST00000460925 ITGA4P13612 1032 aa6.06□□□□□ -1.44
SF3A3-202ENST00000460925 GYS1P13807 737 aa6.06□□□□□ -1.44
SF3A3-202ENST00000460925 GLB1P16278 677 aa6.06□□□□□ -1.44
SF3A3-202ENST00000460925 ADGRE1Q14246 886 aa6.06□□□□□ -1.44
SF3A3-202ENST00000460925 NBPF9Q3BBW0 867 aa6.06□□□□□ -1.44
SF3A3-202ENST00000460925 BEND3Q5T5X7 828 aa6.06□□□□□ -1.44
SF3A3-202ENST00000460925 POMZP3Q6PJE2 187 aa6.06□□□□□ -1.44
SF3A3-202ENST00000460925 TRIM59Q8IWR1 403 aa6.06□□□□□ -1.44
SF3A3-202ENST00000460925 NIM1KQ8IY84 436 aa6.06□□□□□ -1.44
SF3A3-202ENST00000460925 RPUSD2Q8IZ73 545 aaKnown RBP6.06□□□□□ -1.44
SF3A3-202ENST00000460925 CRACR2BQ8N4Y2 399 aaPredicted RBP6.06□□□□□ -1.44
SF3A3-202ENST00000460925 RIN3Q8TB24 985 aa6.06□□□□□ -1.44
SF3A3-202ENST00000460925 FGD4Q96M96 766 aa6.06□□□□□ -1.44
SF3A3-202ENST00000460925 CDC6Q99741 560 aa6.06□□□□□ -1.44
SF3A3-202ENST00000460925 MIPEPQ99797 713 aa6.06□□□□□ -1.44
SF3A3-202ENST00000460925 METTL22Q9BUU2 404 aaPredicted RBP6.06□□□□□ -1.44
SF3A3-202ENST00000460925 API5Q9BZZ5 524 aaKnown RBP6.06□□□□□ -1.44
SF3A3-202ENST00000460925 FAM86C1Q9NVL1 165 aa6.06□□□□□ -1.44
SF3A3-202ENST00000460925 LRP2BPQ9P2M1 347 aa6.06□□□□□ -1.44
SF3A3-202ENST00000460925 NARFQ9UHQ1 456 aa6.06□□□□□ -1.44
SF3A3-202ENST00000460925 DAGLAQ9Y4D2 1042 aa6.06□□□□□ -1.44
SF3A3-202ENST00000460925 FHOD1Q9Y613 1164 aa6.06□□□□□ -1.44
SF3A3-202ENST00000460925 ATP10DQ9P241 1426 aa6.06□□□□□ -1.44
SF3A3-202ENST00000460925 CNTNAP5Q8WYK1 1306 aa6.05□□□□□ -1.44
SF3A3-202ENST00000460925 NOP56O00567 594 aaKnown RBP6.05□□□□□ -1.44
SF3A3-202ENST00000460925 CLGNO14967 610 aa6.05□□□□□ -1.44
SF3A3-202ENST00000460925 IPO8O15397 1037 aaKnown RBP6.05□□□□□ -1.44
SF3A3-202ENST00000460925 DDX58O95786 925 aaKnown RBP6.05□□□□□ -1.44
SF3A3-202ENST00000460925 EOMESO95936 686 aa6.05□□□□□ -1.44
SF3A3-202ENST00000460925 NFICP08651 508 aa6.05□□□□□ -1.44
SF3A3-202ENST00000460925 L1CAMP32004 1257 aa6.05□□□□□ -1.44
SF3A3-202ENST00000460925 DDR1Q08345 913 aa6.05□□□□□ -1.44
SF3A3-202ENST00000460925 PABPC4Q13310 644 aaKnown RBP eCLIP6.05□□□□□ -1.44
SF3A3-202ENST00000460925 MVPQ14764 893 aaKnown RBP6.05□□□□□ -1.44
SF3A3-202ENST00000460925 NFIXQ14938 502 aa6.05□□□□□ -1.44
SF3A3-202ENST00000460925 TRIM61Q5EBN2 209 aa6.05□□□□□ -1.44
SF3A3-202ENST00000460925 FAM209AQ5JX71 171 aa6.05□□□□□ -1.44
SF3A3-202ENST00000460925 YOD1Q5VVQ6 348 aaPredicted RBP6.05□□□□□ -1.44
SF3A3-202ENST00000460925 ADAT2Q7Z6V5 191 aaKnown RBP6.05□□□□□ -1.44
SF3A3-202ENST00000460925 CDH24Q86UP0 819 aa6.05□□□□□ -1.44
SF3A3-202ENST00000460925 SLC51AQ86UW1 340 aa6.05□□□□□ -1.44
SF3A3-202ENST00000460925 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.05□□□□□ -1.44
SF3A3-202ENST00000460925 SYTL5Q8TDW5 730 aaPredicted RBP6.05□□□□□ -1.44
SF3A3-202ENST00000460925 FBLIM1Q8WUP2 373 aa6.05□□□□□ -1.44
SF3A3-202ENST00000460925 OSBP2Q969R2 916 aa6.05□□□□□ -1.44
SF3A3-202ENST00000460925 FAM89AQ96GI7 184 aa6.05□□□□□ -1.44
SF3A3-202ENST00000460925 SUCLG2Q96I99 432 aa6.05□□□□□ -1.44
SF3A3-202ENST00000460925 IPO9Q96P70 1041 aaKnown RBP6.05□□□□□ -1.44
SF3A3-202ENST00000460925 C1GALT1Q9NS00 363 aa6.05□□□□□ -1.44
SF3A3-202ENST00000460925 NIP7Q9Y221 180 aaKnown RBP eCLIP6.05□□□□□ -1.44
SF3A3-202ENST00000460925 DIS3Q9Y2L1 958 aaKnown RBP6.05□□□□□ -1.44
SF3A3-202ENST00000460925 RIPOR2Q9Y4F9 1068 aa6.05□□□□□ -1.44
SF3A3-202ENST00000460925 PCDHB12Q9Y5F1 795 aa6.05□□□□□ -1.44
SF3A3-202ENST00000460925 KIAA1551Q9HCM1 1747 aa6.05□□□□□ -1.44
SF3A3-202ENST00000460925 A0A1B0GUL6 1792 aa6.04□□□□□ -1.44
SF3A3-202ENST00000460925 A0A087X0B3 334 aa6.04□□□□□ -1.44
SF3A3-202ENST00000460925 ERVV-1B6SEH8 477 aa6.04□□□□□ -1.44
SF3A3-202ENST00000460925 RAB11FIP3O75154 756 aa6.04□□□□□ -1.44
SF3A3-202ENST00000460925 NTSR2O95665 410 aa6.04□□□□□ -1.44
SF3A3-202ENST00000460925 NBPF7P0C2Y1 421 aaPredicted RBP6.04□□□□□ -1.44
SF3A3-202ENST00000460925 PABPC1P11940 636 aaKnown RBP6.04□□□□□ -1.44
SF3A3-202ENST00000460925 CYP7A1P22680 504 aa6.04□□□□□ -1.44
SF3A3-202ENST00000460925 COL8A1P27658 744 aa6.04□□□□□ -1.44
SF3A3-202ENST00000460925 MAP4P27816 1152 aaKnown RBP6.04□□□□□ -1.44
SF3A3-202ENST00000460925 IREB2P48200 963 aaKnown RBP6.04□□□□□ -1.44
SF3A3-202ENST00000460925 SUMO1P63165 101 aaKnown RBP6.04□□□□□ -1.44
SF3A3-202ENST00000460925 GRB10Q13322 594 aa6.04□□□□□ -1.44
SF3A3-202ENST00000460925 TCIRG1Q13488 830 aa6.04□□□□□ -1.44
SF3A3-202ENST00000460925 MBTPS1Q14703 1052 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms