RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 SLC16A11Q8NCK7 471 aa4.89□□□□□ -1.63
RFC4-211ENST00000460408 CPA5Q8WXQ8 436 aa4.89□□□□□ -1.63
RFC4-211ENST00000460408 MAGEB10Q96LZ2 347 aaPredicted RBP4.89□□□□□ -1.63
RFC4-211ENST00000460408 MTA3Q9BTC8 594 aa4.89□□□□□ -1.63
RFC4-211ENST00000460408 SPATA6Q9NWH7 488 aaPredicted RBP4.89□□□□□ -1.63
RFC4-211ENST00000460408 NTMQ9P121 344 aa4.89□□□□□ -1.63
RFC4-211ENST00000460408 PPARGC1AQ9UBK2 798 aaKnown RBP4.89□□□□□ -1.63
RFC4-211ENST00000460408 FBLN5Q9UBX5 448 aa4.89□□□□□ -1.63
RFC4-211ENST00000460408 PCDHA2Q9Y5H9 948 aa4.89□□□□□ -1.63
RFC4-211ENST00000460408 TNPO3Q9Y5L0 923 aaKnown RBP4.89□□□□□ -1.63
RFC4-211ENST00000460408 TIMM13Q9Y5L4 95 aaPredicted RBP4.89□□□□□ -1.63
RFC4-211ENST00000460408 NPHS1O60500 1241 aa4.88□□□□□ -1.63
RFC4-211ENST00000460408 CKMP06732 381 aa4.88□□□□□ -1.63
RFC4-211ENST00000460408 MYCLP1P12525 358 aaPredicted RBP4.88□□□□□ -1.63
RFC4-211ENST00000460408 NAT1P18440 290 aa4.88□□□□□ -1.63
RFC4-211ENST00000460408 NCLP19338 710 aaKnown RBP4.88□□□□□ -1.63
RFC4-211ENST00000460408 POU3F3P20264 500 aaPredicted RBP4.88□□□□□ -1.63
RFC4-211ENST00000460408 PMLP29590 882 aa4.88□□□□□ -1.63
RFC4-211ENST00000460408 BCL6P41182 706 aa4.88□□□□□ -1.63
RFC4-211ENST00000460408 GTF2A2P52657 109 aa4.88□□□□□ -1.63
RFC4-211ENST00000460408 RPL11P62913 178 aaKnown RBP4.88□□□□□ -1.63
RFC4-211ENST00000460408 LSAMPQ13449 338 aa4.88□□□□□ -1.63
RFC4-211ENST00000460408 KIZQ2M2Z5 673 aa4.88□□□□□ -1.63
RFC4-211ENST00000460408 MTDHQ86UE4 582 aaKnown RBP4.88□□□□□ -1.63
RFC4-211ENST00000460408 PCDH19Q8TAB3 1148 aa4.88□□□□□ -1.63
RFC4-211ENST00000460408 NOX5Q96PH1 765 aa4.88□□□□□ -1.63
RFC4-211ENST00000460408 SORCS2Q96PQ0 1159 aa4.88□□□□□ -1.63
RFC4-211ENST00000460408 BRINP2Q9C0B6 783 aa4.88□□□□□ -1.63
RFC4-211ENST00000460408 GULP1Q9UBP9 304 aa4.88□□□□□ -1.63
RFC4-211ENST00000460408 MAPRE3Q9UPY8 281 aa4.88□□□□□ -1.63
RFC4-211ENST00000460408 MYO1BO43795 1136 aa4.87□□□□□ -1.63
RFC4-211ENST00000460408 OPA1O60313 960 aa4.87□□□□□ -1.63
RFC4-211ENST00000460408 PLATP00750 562 aa4.87□□□□□ -1.63
RFC4-211ENST00000460408 FSHBP01225 129 aa4.87□□□□□ -1.63
RFC4-211ENST00000460408 SOD2P04179 222 aa4.87□□□□□ -1.63
RFC4-211ENST00000460408 GRK2P25098 689 aa4.87□□□□□ -1.63
RFC4-211ENST00000460408 GRK3P35626 688 aa4.87□□□□□ -1.63
RFC4-211ENST00000460408 AMPD3Q01432 767 aa4.87□□□□□ -1.63
RFC4-211ENST00000460408 CACNB2Q08289 660 aaPredicted RBP4.87□□□□□ -1.63
RFC4-211ENST00000460408 PAK1Q13153 545 aa4.87□□□□□ -1.63
RFC4-211ENST00000460408 PTPROQ16827 1216 aa4.87□□□□□ -1.63
RFC4-211ENST00000460408 TBC1D10BQ4KMP7 808 aaPredicted RBP4.87□□□□□ -1.63
RFC4-211ENST00000460408 ZCCHC8Q6NZY4 707 aaKnown RBP4.87□□□□□ -1.63
RFC4-211ENST00000460408 SMARCC2Q8TAQ2 1214 aa4.87□□□□□ -1.63
RFC4-211ENST00000460408 PLEKHO2Q8TD55 490 aa4.87□□□□□ -1.63
RFC4-211ENST00000460408 C8orf49Q96NF6 230 aa4.87□□□□□ -1.63
RFC4-211ENST00000460408 ORAI3Q9BRQ5 295 aa4.87□□□□□ -1.63
RFC4-211ENST00000460408 ALG1Q9BT22 464 aa4.87□□□□□ -1.63
RFC4-211ENST00000460408 MTFR1LQ9H019 292 aa4.87□□□□□ -1.63
RFC4-211ENST00000460408 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.87□□□□□ -1.63
RFC4-211ENST00000460408 X6R8D5 127 aa4.87□□□□□ -1.63
RFC4-211ENST00000460408 H7BY64 318 aa4.86□□□□□ -1.63
RFC4-211ENST00000460408 FPR2P25090 351 aa4.86□□□□□ -1.63
RFC4-211ENST00000460408 RBM10P98175 930 aaKnown RBP4.86□□□□□ -1.63
RFC4-211ENST00000460408 SLC9A5Q14940 896 aa4.86□□□□□ -1.63
RFC4-211ENST00000460408 HABP4Q5JVS0 413 aaKnown RBP4.86□□□□□ -1.63
RFC4-211ENST00000460408 TTLL7Q6ZT98 887 aa4.86□□□□□ -1.63
RFC4-211ENST00000460408 PPM1KQ8N3J5 372 aa4.86□□□□□ -1.63
RFC4-211ENST00000460408 LINC00482Q8N8I6 264 aa4.86□□□□□ -1.63
RFC4-211ENST00000460408 ADAMTS17Q8TE56 1095 aa4.86□□□□□ -1.63
RFC4-211ENST00000460408 LOXL4Q96JB6 756 aa4.86□□□□□ -1.63
RFC4-211ENST00000460408 PUS7Q96PZ0 661 aaKnown RBP4.86□□□□□ -1.63
RFC4-211ENST00000460408 FAM126AQ9BYI3 521 aaPredicted RBP4.86□□□□□ -1.63
RFC4-211ENST00000460408 CELF4Q9BZC1 486 aaKnown RBP4.86□□□□□ -1.63
RFC4-211ENST00000460408 BCAS3Q9H6U6 928 aa4.86□□□□□ -1.63
RFC4-211ENST00000460408 CAAP1Q9H8G2 361 aa4.86□□□□□ -1.63
RFC4-211ENST00000460408 IPPKQ9H8X2 491 aa4.86□□□□□ -1.63
RFC4-211ENST00000460408 PCDH12Q9NPG4 1184 aa4.86□□□□□ -1.63
RFC4-211ENST00000460408 MARCH2Q9P0N8 246 aa4.86□□□□□ -1.63
RFC4-211ENST00000460408 RWDD3Q9Y3V2 267 aa4.86□□□□□ -1.63
RFC4-211ENST00000460408 COL4A3BPQ9Y5P4 624 aa4.86□□□□□ -1.63
RFC4-211ENST00000460408 B4E1Z4 1266 aa4.85□□□□□ -1.63
RFC4-211ENST00000460408 GLRX3O76003 335 aaKnown RBP4.85□□□□□ -1.63
RFC4-211ENST00000460408 JMJD7P0C870 316 aa4.85□□□□□ -1.63
RFC4-211ENST00000460408 PCBP1Q15365 356 aaKnown RBP eCLIP4.85□□□□□ -1.63
RFC4-211ENST00000460408 SEPT7Q16181 437 aaKnown RBP4.85□□□□□ -1.63
RFC4-211ENST00000460408 CNNM4Q6P4Q7 775 aa4.85□□□□□ -1.63
RFC4-211ENST00000460408 CEP68Q76N32 757 aa4.85□□□□□ -1.63
RFC4-211ENST00000460408 CABP7Q86V35 215 aa4.85□□□□□ -1.63
RFC4-211ENST00000460408 RIOX2Q8IUF8 465 aa4.85□□□□□ -1.63
RFC4-211ENST00000460408 TEX2Q8IWB9 1127 aa4.85□□□□□ -1.63
RFC4-211ENST00000460408 ZC3H7AQ8IWR0 971 aaKnown RBP4.85□□□□□ -1.63
RFC4-211ENST00000460408 AFAP1L2Q8N4X5 818 aa4.85□□□□□ -1.63
RFC4-211ENST00000460408 NETO2Q8NC67 525 aa4.85□□□□□ -1.63
RFC4-211ENST00000460408 CHAC2Q8WUX2 184 aa4.85□□□□□ -1.63
RFC4-211ENST00000460408 ZBTB8AQ96BR9 441 aa4.85□□□□□ -1.63
RFC4-211ENST00000460408 PEX11GQ96HA9 241 aa4.85□□□□□ -1.63
RFC4-211ENST00000460408 TMEM169Q96HH4 297 aa4.85□□□□□ -1.63
RFC4-211ENST00000460408 SSBP3Q9BWW4 388 aaPredicted RBP4.85□□□□□ -1.63
RFC4-211ENST00000460408 RXFP1Q9HBX9 757 aa4.85□□□□□ -1.63
RFC4-211ENST00000460408 CLDND1Q9NY35 253 aa4.85□□□□□ -1.63
RFC4-211ENST00000460408 NUDT5Q9UKK9 219 aa4.85□□□□□ -1.63
RFC4-211ENST00000460408 COQ6Q9Y2Z9 468 aa4.85□□□□□ -1.63
RFC4-211ENST00000460408 C22orf46C9J442 243 aa4.84□□□□□ -1.63
RFC4-211ENST00000460408 FAM47E-STBD1D6RA91 191 aa4.84□□□□□ -1.63
RFC4-211ENST00000460408 ZBTB7AO95365 584 aa4.84□□□□□ -1.63
RFC4-211ENST00000460408 NPTXRO95502 500 aa4.84□□□□□ -1.63
RFC4-211ENST00000460408 FUCA1P04066 466 aa4.84□□□□□ -1.63
RFC4-211ENST00000460408 MECP2P51608 486 aaKnown RBP4.84□□□□□ -1.63
RFC4-211ENST00000460408 CDCA2Q69YH5 1023 aaPredicted RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms