RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 MKRN4PQ13434 485 aaPredicted RBP26.1■■□□□ 1.77
PTPN4-207ENST00000460162 TMCO2Q7Z6W1 182 aaPredicted RBP26.1■■□□□ 1.77
PTPN4-207ENST00000460162 LMBR1Q8WVP7 490 aa26.1■■□□□ 1.77
PTPN4-207ENST00000460162 ARNTL2Q8WYA1 636 aa26.1■■□□□ 1.77
PTPN4-207ENST00000460162 TSPYL2Q9H2G4 693 aaPredicted RBP26.1■■□□□ 1.77
PTPN4-207ENST00000460162 SETD4Q9NVD3 440 aa26.1■■□□□ 1.77
PTPN4-207ENST00000460162 REV3LO60673 3130 aa26.1■■□□□ 1.77
PTPN4-207ENST00000460162 NRCAMQ92823 1304 aa26.1■■□□□ 1.77
PTPN4-207ENST00000460162 PRRC2BQ5JSZ5 2229 aaKnown RBP26.1■■□□□ 1.77
PTPN4-207ENST00000460162 LCHNA4D1U4 455 aa26.09■■□□□ 1.77
PTPN4-207ENST00000460162 GOLGA8AA7E2F4 631 aa26.09■■□□□ 1.77
PTPN4-207ENST00000460162 GOLGA8BA8MQT2 603 aa26.09■■□□□ 1.77
PTPN4-207ENST00000460162 ADAM17P78536 824 aa26.09■■□□□ 1.77
PTPN4-207ENST00000460162 PLEKHG4Q58EX7 1191 aa26.09■■□□□ 1.77
PTPN4-207ENST00000460162 MICALL1Q8N3F8 863 aa26.09■■□□□ 1.77
PTPN4-207ENST00000460162 DBF4BQ8NFT6 615 aa26.09■■□□□ 1.77
PTPN4-207ENST00000460162 RAD9AQ99638 391 aa26.09■■□□□ 1.77
PTPN4-207ENST00000460162 RIC8AQ9NPQ8 531 aa26.09■■□□□ 1.77
PTPN4-207ENST00000460162 JADE2Q9NQC1 790 aa26.09■■□□□ 1.77
PTPN4-207ENST00000460162 MTCH2Q9Y6C9 303 aa26.09■■□□□ 1.77
PTPN4-207ENST00000460162 KLF18A0A0U1RQI7 1052 aa26.08■■□□□ 1.77
PTPN4-207ENST00000460162 ARHGAP4P98171 946 aa26.08■■□□□ 1.77
PTPN4-207ENST00000460162 TYW1BQ6NUM6 668 aa26.08■■□□□ 1.77
PTPN4-207ENST00000460162 SEPT1Q8WYJ6 367 aa26.08■■□□□ 1.77
PTPN4-207ENST00000460162 COL4A6Q14031 1691 aa26.07■■□□□ 1.76
PTPN4-207ENST00000460162 RFXAPO00287 272 aa26.07■■□□□ 1.76
PTPN4-207ENST00000460162 AMHP03971 560 aa26.07■■□□□ 1.76
PTPN4-207ENST00000460162 CTSHP09668 335 aa26.07■■□□□ 1.76
PTPN4-207ENST00000460162 ADCY7P51828 1080 aa26.07■■□□□ 1.76
PTPN4-207ENST00000460162 SEPT8Q92599 483 aa26.07■■□□□ 1.76
PTPN4-207ENST00000460162 ASB2Q96Q27 587 aa26.07■■□□□ 1.76
PTPN4-207ENST00000460162 ERAP1Q9NZ08 941 aa26.07■■□□□ 1.76
PTPN4-207ENST00000460162 FOSP01100 380 aaPredicted RBP26.06■■□□□ 1.76
PTPN4-207ENST00000460162 MRPS5P82675 430 aaKnown RBP26.06■■□□□ 1.76
PTPN4-207ENST00000460162 GLT8D2Q9H1C3 349 aa26.06■■□□□ 1.76
PTPN4-207ENST00000460162 JPH1Q9HDC5 661 aaPredicted RBP26.06■■□□□ 1.76
PTPN4-207ENST00000460162 BARHL2Q9NY43 387 aa26.06■■□□□ 1.76
PTPN4-207ENST00000460162 PKD2L1Q9P0L9 805 aa26.06■■□□□ 1.76
PTPN4-207ENST00000460162 GSTTP1A0A1W2PQM5 241 aa26.05■■□□□ 1.76
PTPN4-207ENST00000460162 STXBP3O00186 592 aa26.05■■□□□ 1.76
PTPN4-207ENST00000460162 PPFIA1Q13136 1202 aa26.05■■□□□ 1.76
PTPN4-207ENST00000460162 AP3B2Q13367 1082 aa26.05■■□□□ 1.76
PTPN4-207ENST00000460162 FAM26DQ5JW98 314 aa26.05■■□□□ 1.76
PTPN4-207ENST00000460162 TAF2Q6P1X5 1199 aa26.05■■□□□ 1.76
PTPN4-207ENST00000460162 SPRED2Q7Z698 418 aa26.05■■□□□ 1.76
PTPN4-207ENST00000460162 RPAINQ86UA6 219 aa26.05■■□□□ 1.76
PTPN4-207ENST00000460162 KCNB2Q92953 911 aa26.05■■□□□ 1.76
PTPN4-207ENST00000460162 MXRA8Q9BRK3 442 aa26.05■■□□□ 1.76
PTPN4-207ENST00000460162 ANO3Q9BYT9 981 aa26.05■■□□□ 1.76
PTPN4-207ENST00000460162 V9GY48 417 aaPredicted RBP26.05■■□□□ 1.76
PTPN4-207ENST00000460162 NID2Q14112 1375 aa26.05■■□□□ 1.76
PTPN4-207ENST00000460162 FGD1P98174 961 aa26.04■■□□□ 1.76
PTPN4-207ENST00000460162 GRB10Q13322 594 aa26.04■■□□□ 1.76
PTPN4-207ENST00000460162 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.04■■□□□ 1.76
PTPN4-207ENST00000460162 MYOCDQ8IZQ8 938 aa26.04■■□□□ 1.76
PTPN4-207ENST00000460162 APBB2Q92870 758 aa26.04■■□□□ 1.76
PTPN4-207ENST00000460162 GLG1Q92896 1179 aa26.04■■□□□ 1.76
PTPN4-207ENST00000460162 SMARCAD1Q9H4L7 1026 aa26.04■■□□□ 1.76
PTPN4-207ENST00000460162 KCNH7Q9NS40 1196 aa26.04■■□□□ 1.76
PTPN4-207ENST00000460162 FAM217BQ9NTX9 383 aaPredicted RBP26.04■■□□□ 1.76
PTPN4-207ENST00000460162 INSL6Q9Y581 213 aa26.04■■□□□ 1.76
PTPN4-207ENST00000460162 MUC3AQ02505 3323 aa26.03■■□□□ 1.76
PTPN4-207ENST00000460162 LINC01553A4QN01 128 aa26.03■■□□□ 1.76
PTPN4-207ENST00000460162 CDC27P30260 824 aa26.03■■□□□ 1.76
PTPN4-207ENST00000460162 HSPA4P34932 840 aa26.03■■□□□ 1.76
PTPN4-207ENST00000460162 ERVK-21P61565 698 aa26.03■■□□□ 1.76
PTPN4-207ENST00000460162 CCDC136Q96JN2 1154 aa26.03■■□□□ 1.76
PTPN4-207ENST00000460162 TGS1Q96RS0 853 aaKnown RBP26.03■■□□□ 1.76
PTPN4-207ENST00000460162 SLC9A2Q9UBY0 812 aa26.03■■□□□ 1.76
PTPN4-207ENST00000460162 TUBE1Q9UJT0 475 aa26.03■■□□□ 1.76
PTPN4-207ENST00000460162 NFASCO94856 1347 aa26.03■■□□□ 1.76
PTPN4-207ENST00000460162 CCDC196A0A1B0GTZ2 297 aa26.02■■□□□ 1.76
PTPN4-207ENST00000460162 SMCO2A6NFE2 343 aa26.02■■□□□ 1.76
PTPN4-207ENST00000460162 LPXNO60711 386 aa26.02■■□□□ 1.76
PTPN4-207ENST00000460162 MARK3P27448 753 aa26.02■■□□□ 1.76
PTPN4-207ENST00000460162 SREBF1P36956 1147 aa26.02■■□□□ 1.76
PTPN4-207ENST00000460162 CLK2P49760 499 aaKnown RBP26.02■■□□□ 1.76
PTPN4-207ENST00000460162 METAP2P50579 478 aaKnown RBP eCLIP26.02■■□□□ 1.76
PTPN4-207ENST00000460162 HTRA4P83105 476 aaPredicted RBP26.02■■□□□ 1.76
PTPN4-207ENST00000460162 GRIK4Q16099 956 aa26.02■■□□□ 1.76
PTPN4-207ENST00000460162 FAM117BQ6P1L5 589 aa26.02■■□□□ 1.76
PTPN4-207ENST00000460162 PGBD1Q96JS3 809 aa26.02■■□□□ 1.76
PTPN4-207ENST00000460162 SDF4Q9BRK5 362 aa26.02■■□□□ 1.76
PTPN4-207ENST00000460162 MBLAC1A4D2B0 266 aaPredicted RBP26.01■■□□□ 1.75
PTPN4-207ENST00000460162 XIRP2A4UGR9 3374 aa26.01■■□□□ 1.75
PTPN4-207ENST00000460162 RPLP2P05387 115 aaKnown RBP26.01■■□□□ 1.75
PTPN4-207ENST00000460162 SKIV2LQ15477 1246 aaKnown RBP26.01■■□□□ 1.75
PTPN4-207ENST00000460162 AAK1Q2M2I8 961 aa26.01■■□□□ 1.75
PTPN4-207ENST00000460162 CEP55Q53EZ4 464 aa26.01■■□□□ 1.75
PTPN4-207ENST00000460162 IL27Q8NEV9 243 aa26.01■■□□□ 1.75
PTPN4-207ENST00000460162 JAKMIP1Q96N16 626 aaKnown RBP26.01■■□□□ 1.75
PTPN4-207ENST00000460162 IFIH1Q9BYX4 1025 aaKnown RBP26.01■■□□□ 1.75
PTPN4-207ENST00000460162 LMCD1Q9NZU5 365 aa26.01■■□□□ 1.75
PTPN4-207ENST00000460162 NAP1L2Q9ULW6 460 aaPredicted RBP26.01■■□□□ 1.75
PTPN4-207ENST00000460162 PFKFB3Q16875 520 aaPredicted RBP26■■□□□ 1.75
PTPN4-207ENST00000460162 KRT40Q6A162 431 aa26■■□□□ 1.75
PTPN4-207ENST00000460162 BLOC1S2Q6QNY1 142 aa26■■□□□ 1.75
PTPN4-207ENST00000460162 Q6ZUG5 572 aa26■■□□□ 1.75
PTPN4-207ENST00000460162 RSPH3Q86UC2 560 aa26■■□□□ 1.75
PTPN4-207ENST00000460162 SP7Q8TDD2 431 aaPredicted RBP26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms