RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 MTMR9Q96QG7 549 aa10.05□□□□□ -0.8
VPS50-207ENST00000458530 PARK7Q99497 189 aaKnown RBP10.05□□□□□ -0.8
VPS50-207ENST00000458530 LRRC27Q9C0I9 530 aa10.05□□□□□ -0.8
VPS50-207ENST00000458530 NT5C3AQ9H0P0 336 aa10.05□□□□□ -0.8
VPS50-207ENST00000458530 RBSNQ9H1K0 784 aa10.05□□□□□ -0.8
VPS50-207ENST00000458530 RAVER2Q9HCJ3 691 aaKnown RBP10.05□□□□□ -0.8
VPS50-207ENST00000458530 RMND1Q9NWS8 449 aa10.05□□□□□ -0.8
VPS50-207ENST00000458530 STK17AQ9UEE5 414 aa10.05□□□□□ -0.8
VPS50-207ENST00000458530 LRWD1Q9UFC0 647 aa10.05□□□□□ -0.8
VPS50-207ENST00000458530 FBXO40Q9UH90 709 aa10.05□□□□□ -0.8
VPS50-207ENST00000458530 SERTAD1Q9UHV2 236 aa10.05□□□□□ -0.8
VPS50-207ENST00000458530 PNMA3Q9UL41 463 aa10.05□□□□□ -0.8
VPS50-207ENST00000458530 ADAMTS5Q9UNA0 930 aa10.05□□□□□ -0.8
VPS50-207ENST00000458530 SLC45A1Q9Y2W3 748 aa10.05□□□□□ -0.8
VPS50-207ENST00000458530 MRVI1Q9Y6F6 885 aa10.05□□□□□ -0.8
VPS50-207ENST00000458530 KIAA1217Q5T5P2 1943 aa10.05□□□□□ -0.8
VPS50-207ENST00000458530 GOLGA6L19H0YKK7 550 aa10.04□□□□□ -0.8
VPS50-207ENST00000458530 SLC37A4O43826 429 aa10.04□□□□□ -0.8
VPS50-207ENST00000458530 CYP2C8P10632 490 aa10.04□□□□□ -0.8
VPS50-207ENST00000458530 ELNP15502 786 aa10.04□□□□□ -0.8
VPS50-207ENST00000458530 HOXA7P31268 230 aaPredicted RBP10.04□□□□□ -0.8
VPS50-207ENST00000458530 HOXA13P31271 388 aaPredicted RBP10.04□□□□□ -0.8
VPS50-207ENST00000458530 TECP42680 631 aa10.04□□□□□ -0.8
VPS50-207ENST00000458530 PSEN2P49810 448 aa10.04□□□□□ -0.8
VPS50-207ENST00000458530 ZNF165P49910 485 aa10.04□□□□□ -0.8
VPS50-207ENST00000458530 NLRP12P59046 1061 aa10.04□□□□□ -0.8
VPS50-207ENST00000458530 AMPD3Q01432 767 aa10.04□□□□□ -0.8
VPS50-207ENST00000458530 CT47A1Q5JQC4 288 aaPredicted RBP10.04□□□□□ -0.8
VPS50-207ENST00000458530 SNRNP48Q6IEG0 339 aaKnown RBP10.04□□□□□ -0.8
VPS50-207ENST00000458530 XRRA1Q6P2D8 792 aa10.04□□□□□ -0.8
VPS50-207ENST00000458530 NIPA1Q7RTP0 329 aa10.04□□□□□ -0.8
VPS50-207ENST00000458530 KCTD17Q8N5Z5 321 aa10.04□□□□□ -0.8
VPS50-207ENST00000458530 CHST13Q8NET6 341 aa10.04□□□□□ -0.8
VPS50-207ENST00000458530 DIS3LQ8TF46 1054 aaKnown RBP10.04□□□□□ -0.8
VPS50-207ENST00000458530 CRYGNQ8WXF5 182 aa10.04□□□□□ -0.8
VPS50-207ENST00000458530 PAWRQ96IZ0 340 aaKnown RBP10.04□□□□□ -0.8
VPS50-207ENST00000458530 DEFB118Q96PH6 123 aa10.04□□□□□ -0.8
VPS50-207ENST00000458530 TRERF1Q96PN7 1200 aa10.04□□□□□ -0.8
VPS50-207ENST00000458530 ACAD9Q9H845 621 aa10.04□□□□□ -0.8
VPS50-207ENST00000458530 TTC12Q9H892 705 aaPredicted RBP10.04□□□□□ -0.8
VPS50-207ENST00000458530 KCNMB3Q9NPA1 279 aa10.04□□□□□ -0.8
VPS50-207ENST00000458530 RNF146Q9NTX7 359 aa10.04□□□□□ -0.8
VPS50-207ENST00000458530 TUBE1Q9UJT0 475 aa10.04□□□□□ -0.8
VPS50-207ENST00000458530 PCDHA12Q9UN75 941 aa10.04□□□□□ -0.8
VPS50-207ENST00000458530 AGTPBP1Q9UPW5 1226 aa10.04□□□□□ -0.8
VPS50-207ENST00000458530 SPDYE16A6NNV3 312 aaPredicted RBP10.03□□□□□ -0.8
VPS50-207ENST00000458530 BECN2A8MW95 431 aa10.03□□□□□ -0.8
VPS50-207ENST00000458530 XRCC6P12956 609 aaKnown RBP eCLIP10.03□□□□□ -0.8
VPS50-207ENST00000458530 CCDC173Q0VFZ6 552 aa10.03□□□□□ -0.8
VPS50-207ENST00000458530 IL17AQ16552 155 aa10.03□□□□□ -0.8
VPS50-207ENST00000458530 PRR16Q569H4 304 aa10.03□□□□□ -0.8
VPS50-207ENST00000458530 FAM109BQ6ICB4 259 aaPredicted RBP10.03□□□□□ -0.8
VPS50-207ENST00000458530 LBX2Q6XYB7 198 aa10.03□□□□□ -0.8
VPS50-207ENST00000458530 RNF207Q6ZRF8 634 aa10.03□□□□□ -0.8
VPS50-207ENST00000458530 NECAB2Q7Z6G3 386 aa10.03□□□□□ -0.8
VPS50-207ENST00000458530 TDHQ8IZJ6 230 aa10.03□□□□□ -0.8
VPS50-207ENST00000458530 RNF214Q8ND24 703 aa10.03□□□□□ -0.8
VPS50-207ENST00000458530 CLEC4DQ8WXI8 215 aa10.03□□□□□ -0.8
VPS50-207ENST00000458530 GSDMAQ96QA5 445 aa10.03□□□□□ -0.8
VPS50-207ENST00000458530 BPIFA3Q9BQP9 254 aa10.03□□□□□ -0.8
VPS50-207ENST00000458530 TCEAL9Q9UHQ7 104 aa10.03□□□□□ -0.8
VPS50-207ENST00000458530 PFASO15067 1338 aa10.03□□□□□ -0.8
VPS50-207ENST00000458530 FRMPD4Q14CM0 1322 aa10.03□□□□□ -0.8
VPS50-207ENST00000458530 RPTORQ8N122 1335 aa10.03□□□□□ -0.8
VPS50-207ENST00000458530 WDR81Q562E7 1941 aa10.02□□□□□ -0.81
VPS50-207ENST00000458530 SMTNL1A8MU46 457 aa10.02□□□□□ -0.81
VPS50-207ENST00000458530 B4DLN1 442 aa10.02□□□□□ -0.81
VPS50-207ENST00000458530 NFIBO00712 420 aa10.02□□□□□ -0.81
VPS50-207ENST00000458530 STAM2O75886 525 aa10.02□□□□□ -0.81
VPS50-207ENST00000458530 SLC25A27O95847 323 aa10.02□□□□□ -0.81
VPS50-207ENST00000458530 TFRCP02786 760 aaKnown RBP10.02□□□□□ -0.81
VPS50-207ENST00000458530 STAT3P40763 770 aa10.02□□□□□ -0.81
VPS50-207ENST00000458530 MAGEA10P43363 369 aaPredicted RBP10.02□□□□□ -0.81
VPS50-207ENST00000458530 PNOCQ13519 176 aa10.02□□□□□ -0.81
VPS50-207ENST00000458530 KARSQ15046 597 aaKnown RBP10.02□□□□□ -0.81
VPS50-207ENST00000458530 E2F4Q16254 413 aa10.02□□□□□ -0.81
VPS50-207ENST00000458530 CEP55Q53EZ4 464 aa10.02□□□□□ -0.81
VPS50-207ENST00000458530 NT5DC1Q5TFE4 455 aa10.02□□□□□ -0.81
VPS50-207ENST00000458530 DMRTA1Q5VZB9 504 aa10.02□□□□□ -0.81
VPS50-207ENST00000458530 PCNX4Q63HM2 1172 aa10.02□□□□□ -0.81
VPS50-207ENST00000458530 PDXDC2PQ6P474 469 aa10.02□□□□□ -0.81
VPS50-207ENST00000458530 USP49Q70CQ1 688 aa10.02□□□□□ -0.81
VPS50-207ENST00000458530 PLA2G4DQ86XP0 818 aa10.02□□□□□ -0.81
VPS50-207ENST00000458530 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.02□□□□□ -0.81
VPS50-207ENST00000458530 MLKLQ8NB16 471 aa10.02□□□□□ -0.81
VPS50-207ENST00000458530 REPS2Q8NFH8 660 aa10.02□□□□□ -0.81
VPS50-207ENST00000458530 ETNPPLQ8TBG4 499 aa10.02□□□□□ -0.81
VPS50-207ENST00000458530 SNX29Q8TEQ0 813 aa10.02□□□□□ -0.81
VPS50-207ENST00000458530 PAGE5Q96GU1 130 aa10.02□□□□□ -0.81
VPS50-207ENST00000458530 MPHOSPH6Q99547 160 aaKnown RBP10.02□□□□□ -0.81
VPS50-207ENST00000458530 WDR11Q9BZH6 1224 aa10.02□□□□□ -0.81
VPS50-207ENST00000458530 DNAJC25Q9H1X3 360 aa10.02□□□□□ -0.81
VPS50-207ENST00000458530 HOMER2Q9NSB8 354 aa10.02□□□□□ -0.81
VPS50-207ENST00000458530 ZNF214Q9UL59 606 aaPredicted RBP10.02□□□□□ -0.81
VPS50-207ENST00000458530 DOCK3Q8IZD9 2030 aa10.02□□□□□ -0.81
VPS50-207ENST00000458530 LCTP09848 1927 aa10.01□□□□□ -0.81
VPS50-207ENST00000458530 ZNFX1Q9P2E3 1918 aaKnown RBP10.01□□□□□ -0.81
VPS50-207ENST00000458530 PLCG1P19174 1290 aa10.01□□□□□ -0.81
VPS50-207ENST00000458530 CCND2P30279 289 aa10.01□□□□□ -0.81
VPS50-207ENST00000458530 PBX2P40425 430 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms