RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 NCAPH2Q6IBW4 605 aa13.04□□□□□ -0.32
SYNE2-207ENST00000458046 SLC44A5Q8NCS7 719 aa13.04□□□□□ -0.32
SYNE2-207ENST00000458046 PCDHA6Q9UN73 950 aa13.04□□□□□ -0.32
SYNE2-207ENST00000458046 PCDHA8Q9Y5H6 950 aa13.04□□□□□ -0.32
SYNE2-207ENST00000458046 TNRC6CQ9HCJ0 1690 aaKnown RBP13.04□□□□□ -0.32
SYNE2-207ENST00000458046 A6NCN8 305 aa13.03□□□□□ -0.32
SYNE2-207ENST00000458046 H3BQF6 201 aa13.03□□□□□ -0.32
SYNE2-207ENST00000458046 ENC1O14682 589 aa13.03□□□□□ -0.32
SYNE2-207ENST00000458046 MYL1P05976 194 aa13.03□□□□□ -0.32
SYNE2-207ENST00000458046 PIK3CAP42336 1068 aa13.03□□□□□ -0.32
SYNE2-207ENST00000458046 SLC35G1Q2M3R5 365 aa13.03□□□□□ -0.32
SYNE2-207ENST00000458046 MB21D1Q8N884 522 aa13.03□□□□□ -0.32
SYNE2-207ENST00000458046 ABCB6Q9NP58 842 aa13.03□□□□□ -0.32
SYNE2-207ENST00000458046 STX8Q9UNK0 236 aa13.03□□□□□ -0.32
SYNE2-207ENST00000458046 REXO2Q9Y3B8 237 aaKnown RBP13.03□□□□□ -0.32
SYNE2-207ENST00000458046 SBF2Q86WG5 1849 aa13.03□□□□□ -0.32
SYNE2-207ENST00000458046 CYTH3O43739 400 aa13.03□□□□□ -0.32
SYNE2-207ENST00000458046 NDUFA10O95299 355 aa13.03□□□□□ -0.32
SYNE2-207ENST00000458046 HNRNPH2P55795 449 aaKnown RBP13.03□□□□□ -0.32
SYNE2-207ENST00000458046 RACK1P63244 317 aaKnown RBP13.03□□□□□ -0.32
SYNE2-207ENST00000458046 DALRD3Q5D0E6 543 aaKnown RBP13.03□□□□□ -0.32
SYNE2-207ENST00000458046 BEND6Q5SZJ8 279 aaPredicted RBP13.03□□□□□ -0.32
SYNE2-207ENST00000458046 SNX32Q86XE0 403 aa13.03□□□□□ -0.32
SYNE2-207ENST00000458046 MYO1HQ8N1T3 1032 aa13.03□□□□□ -0.32
SYNE2-207ENST00000458046 SH3RF3Q8TEJ3 882 aaPredicted RBP13.03□□□□□ -0.32
SYNE2-207ENST00000458046 LRRC15Q8TF66 581 aa13.03□□□□□ -0.32
SYNE2-207ENST00000458046 TRIM47Q96LD4 638 aa13.03□□□□□ -0.32
SYNE2-207ENST00000458046 PAIP2Q9BPZ3 127 aaKnown RBP13.03□□□□□ -0.32
SYNE2-207ENST00000458046 MAD2L2Q9UI95 211 aa13.03□□□□□ -0.32
SYNE2-207ENST00000458046 LUC7L2Q9Y383 392 aaKnown RBP13.03□□□□□ -0.32
SYNE2-207ENST00000458046 DAAM1Q9Y4D1 1078 aa13.03□□□□□ -0.32
SYNE2-207ENST00000458046 CTAGE15A4D2H0 777 aa13.02□□□□□ -0.32
SYNE2-207ENST00000458046 CTAGE8P0CG41 777 aa13.02□□□□□ -0.32
SYNE2-207ENST00000458046 FOSL1P15407 271 aa13.02□□□□□ -0.32
SYNE2-207ENST00000458046 PAX7P23759 505 aa13.02□□□□□ -0.32
SYNE2-207ENST00000458046 PPP2R5AQ15172 486 aa13.02□□□□□ -0.32
SYNE2-207ENST00000458046 DIXDC1Q155Q3 683 aa13.02□□□□□ -0.32
SYNE2-207ENST00000458046 FAM98CQ17RN3 349 aaKnown RBP13.02□□□□□ -0.32
SYNE2-207ENST00000458046 FAM83BQ5T0W9 1011 aa13.02□□□□□ -0.32
SYNE2-207ENST00000458046 C12orf60Q5U649 245 aa13.02□□□□□ -0.32
SYNE2-207ENST00000458046 CTAGE6Q86UF2 777 aa13.02□□□□□ -0.32
SYNE2-207ENST00000458046 CTAGE4Q8IX94 777 aa13.02□□□□□ -0.32
SYNE2-207ENST00000458046 NOA1Q8NC60 698 aaKnown RBP13.02□□□□□ -0.32
SYNE2-207ENST00000458046 OR8K1Q8NGG5 319 aa13.02□□□□□ -0.32
SYNE2-207ENST00000458046 SETDB2Q96T68 719 aa13.02□□□□□ -0.32
SYNE2-207ENST00000458046 PDE11AQ9HCR9 933 aa13.02□□□□□ -0.32
SYNE2-207ENST00000458046 HDAC6Q9UBN7 1215 aa13.02□□□□□ -0.32
SYNE2-207ENST00000458046 MYO6Q9UM54 1294 aa13.02□□□□□ -0.32
SYNE2-207ENST00000458046 MYH13Q9UKX3 1938 aa13.02□□□□□ -0.33
SYNE2-207ENST00000458046 TSPY3P0CV98 308 aa13.02□□□□□ -0.33
SYNE2-207ENST00000458046 TSPY8P0CW00 308 aa13.02□□□□□ -0.33
SYNE2-207ENST00000458046 VSNL1P62760 191 aa13.02□□□□□ -0.33
SYNE2-207ENST00000458046 TRIM14Q14142 442 aa13.02□□□□□ -0.33
SYNE2-207ENST00000458046 ELOAQ14241 798 aaKnown RBP13.02□□□□□ -0.33
SYNE2-207ENST00000458046 SLC10A5Q5PT55 438 aa13.02□□□□□ -0.33
SYNE2-207ENST00000458046 RC3H1Q5TC82 1133 aaKnown RBP13.02□□□□□ -0.33
SYNE2-207ENST00000458046 DGKHQ86XP1 1220 aa13.02□□□□□ -0.33
SYNE2-207ENST00000458046 SMARCC1Q92922 1105 aaPredicted RBP13.02□□□□□ -0.33
SYNE2-207ENST00000458046 SAP30BPQ9UHR5 308 aaKnown RBP13.02□□□□□ -0.33
SYNE2-207ENST00000458046 PRKAB1Q9Y478 270 aa13.02□□□□□ -0.33
SYNE2-207ENST00000458046 B4DLN1 442 aa13.01□□□□□ -0.33
SYNE2-207ENST00000458046 MAP2K7O14733 419 aa13.01□□□□□ -0.33
SYNE2-207ENST00000458046 KLRC4O43908 158 aa13.01□□□□□ -0.33
SYNE2-207ENST00000458046 GRIK5Q16478 980 aa13.01□□□□□ -0.33
SYNE2-207ENST00000458046 PTF1AQ7RTS3 328 aa13.01□□□□□ -0.33
SYNE2-207ENST00000458046 TGFBRAP1Q8WUH2 860 aa13.01□□□□□ -0.33
SYNE2-207ENST00000458046 TRERF1Q96PN7 1200 aa13.01□□□□□ -0.33
SYNE2-207ENST00000458046 GPCPD1Q9NPB8 672 aa13.01□□□□□ -0.33
SYNE2-207ENST00000458046 SHTN1A0MZ66 631 aa13.01□□□□□ -0.33
SYNE2-207ENST00000458046 M0R2N6 131 aa13.01□□□□□ -0.33
SYNE2-207ENST00000458046 MAP3K7O43318 606 aa13.01□□□□□ -0.33
SYNE2-207ENST00000458046 KLK7P49862 253 aa13.01□□□□□ -0.33
SYNE2-207ENST00000458046 ZNF444Q8N0Y2 327 aaPredicted RBP13.01□□□□□ -0.33
SYNE2-207ENST00000458046 MSANTD4Q8NCY6 345 aa13.01□□□□□ -0.33
SYNE2-207ENST00000458046 RELTQ969Z4 430 aa13.01□□□□□ -0.33
SYNE2-207ENST00000458046 ANKRD2Q9GZV1 360 aa13.01□□□□□ -0.33
SYNE2-207ENST00000458046 SH3GLB2Q9NR46 395 aa13.01□□□□□ -0.33
SYNE2-207ENST00000458046 AGPAT5Q9NUQ2 364 aa13.01□□□□□ -0.33
SYNE2-207ENST00000458046 LGALS16A8MUM7 142 aa13□□□□□ -0.33
SYNE2-207ENST00000458046 PSMA7O14818 248 aa13□□□□□ -0.33
SYNE2-207ENST00000458046 N4BP1O75113 896 aaKnown RBP13□□□□□ -0.33
SYNE2-207ENST00000458046 TUBB2AQ13885 445 aa13□□□□□ -0.33
SYNE2-207ENST00000458046 GRM4Q14833 912 aa13□□□□□ -0.33
SYNE2-207ENST00000458046 LETM2Q2VYF4 491 aa13□□□□□ -0.33
SYNE2-207ENST00000458046 WDR59Q6PJI9 974 aa13□□□□□ -0.33
SYNE2-207ENST00000458046 ZNF507Q8TCN5 953 aa13□□□□□ -0.33
SYNE2-207ENST00000458046 GPR101Q96P66 508 aaPredicted RBP13□□□□□ -0.33
SYNE2-207ENST00000458046 TUBB2BQ9BVA1 445 aa13□□□□□ -0.33
SYNE2-207ENST00000458046 VAT1LQ9HCJ6 419 aa13□□□□□ -0.33
SYNE2-207ENST00000458046 RIC8AQ9NPQ8 531 aa13□□□□□ -0.33
SYNE2-207ENST00000458046 ADAM21Q9UKJ8 722 aa13□□□□□ -0.33
SYNE2-207ENST00000458046 RAB21Q9UL25 225 aa13□□□□□ -0.33
SYNE2-207ENST00000458046 INPP5FQ9Y2H2 1132 aa13□□□□□ -0.33
SYNE2-207ENST00000458046 SRGAP2O75044 1071 aa13□□□□□ -0.33
SYNE2-207ENST00000458046 LDHBP07195 334 aaKnown RBP13□□□□□ -0.33
SYNE2-207ENST00000458046 GLULP15104 373 aa13□□□□□ -0.33
SYNE2-207ENST00000458046 ZNF131P52739 623 aa13□□□□□ -0.33
SYNE2-207ENST00000458046 STIM1Q13586 685 aa13□□□□□ -0.33
SYNE2-207ENST00000458046 WHAMMP3Q1A5X7 153 aa13□□□□□ -0.33
SYNE2-207ENST00000458046 HDXQ7Z353 690 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms