RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 ENPP3O14638 875 aa19.1■□□□□ 0.65
SF3B4-202ENST00000457312 GHRP10912 638 aa19.1■□□□□ 0.65
SF3B4-202ENST00000457312 FAM26DQ5JW98 314 aa19.1■□□□□ 0.65
SF3B4-202ENST00000457312 LINC01599Q8WXQ3 324 aa19.1■□□□□ 0.65
SF3B4-202ENST00000457312 ADAM7Q9H2U9 754 aa19.1■□□□□ 0.65
SF3B4-202ENST00000457312 KAT6AQ92794 2004 aa19.09■□□□□ 0.65
SF3B4-202ENST00000457312 B4DLN1 442 aa19.09■□□□□ 0.65
SF3B4-202ENST00000457312 MRPL12P52815 198 aaKnown RBP19.09■□□□□ 0.65
SF3B4-202ENST00000457312 RCSD1Q6JBY9 416 aa19.09■□□□□ 0.65
SF3B4-202ENST00000457312 AACSQ86V21 672 aa19.09■□□□□ 0.65
SF3B4-202ENST00000457312 DDX41Q9UJV9 622 aaKnown RBP19.09■□□□□ 0.65
SF3B4-202ENST00000457312 PATJQ8NI35 1801 aa19.09■□□□□ 0.65
SF3B4-202ENST00000457312 BCAR3O75815 825 aa19.08■□□□□ 0.64
SF3B4-202ENST00000457312 TGM1P22735 817 aa19.08■□□□□ 0.64
SF3B4-202ENST00000457312 ITIH3Q06033 890 aa19.08■□□□□ 0.64
SF3B4-202ENST00000457312 TPRNQ4KMQ1 711 aa19.08■□□□□ 0.64
SF3B4-202ENST00000457312 CES5AQ6NT32 575 aa19.08■□□□□ 0.64
SF3B4-202ENST00000457312 MIA3Q5JRA6 1907 aa19.08■□□□□ 0.64
SF3B4-202ENST00000457312 NAV2Q8IVL1 2488 aa19.07■□□□□ 0.64
SF3B4-202ENST00000457312 WEE2P0C1S8 567 aa19.07■□□□□ 0.64
SF3B4-202ENST00000457312 SMIM10L2AP0DMW4 78 aa19.07■□□□□ 0.64
SF3B4-202ENST00000457312 SMIM10L2BP0DMW5 78 aa19.07■□□□□ 0.64
SF3B4-202ENST00000457312 TBC1D8BQ0IIM8 1120 aa19.07■□□□□ 0.64
SF3B4-202ENST00000457312 TDGQ13569 410 aa19.07■□□□□ 0.64
SF3B4-202ENST00000457312 LAMC2Q13753 1193 aa19.07■□□□□ 0.64
SF3B4-202ENST00000457312 PLPP4Q5VZY2 271 aa19.07■□□□□ 0.64
SF3B4-202ENST00000457312 ZNF444Q8N0Y2 327 aaPredicted RBP19.07■□□□□ 0.64
SF3B4-202ENST00000457312 PLCD3Q8N3E9 789 aa19.07■□□□□ 0.64
SF3B4-202ENST00000457312 NEDD1Q8NHV4 660 aa19.07■□□□□ 0.64
SF3B4-202ENST00000457312 C16orf70Q9BSU1 422 aa19.07■□□□□ 0.64
SF3B4-202ENST00000457312 EHMT1Q9H9B1 1298 aa19.07■□□□□ 0.64
SF3B4-202ENST00000457312 DLGAP2Q9P1A6 1054 aa19.07■□□□□ 0.64
SF3B4-202ENST00000457312 KRBA1A5PL33 1030 aa19.06■□□□□ 0.64
SF3B4-202ENST00000457312 MINDY4BA8MYZ0 360 aa19.06■□□□□ 0.64
SF3B4-202ENST00000457312 CHRNA1P02708 482 aa19.06■□□□□ 0.64
SF3B4-202ENST00000457312 PMLP29590 882 aa19.06■□□□□ 0.64
SF3B4-202ENST00000457312 MTHFRP42898 656 aa19.06■□□□□ 0.64
SF3B4-202ENST00000457312 PDE12Q6L8Q7 609 aaKnown RBP19.06■□□□□ 0.64
SF3B4-202ENST00000457312 C1orf210Q8IVY1 113 aa19.06■□□□□ 0.64
SF3B4-202ENST00000457312 USP18Q9UMW8 372 aa19.06■□□□□ 0.64
SF3B4-202ENST00000457312 USTQ9Y2C2 406 aa19.06■□□□□ 0.64
SF3B4-202ENST00000457312 SPTLC1O15269 473 aa19.05■□□□□ 0.64
SF3B4-202ENST00000457312 FGF18O76093 207 aa19.05■□□□□ 0.64
SF3B4-202ENST00000457312 GATMP50440 423 aa19.05■□□□□ 0.64
SF3B4-202ENST00000457312 LPIN1Q14693 890 aa19.05■□□□□ 0.64
SF3B4-202ENST00000457312 SPECC1Q5M775 1068 aa19.05■□□□□ 0.64
SF3B4-202ENST00000457312 NPAS4Q8IUM7 802 aa19.05■□□□□ 0.64
SF3B4-202ENST00000457312 CASP10Q92851 521 aa19.05■□□□□ 0.64
SF3B4-202ENST00000457312 RNPEPQ9H4A4 650 aa19.05■□□□□ 0.64
SF3B4-202ENST00000457312 MRS2Q9HD23 443 aa19.05■□□□□ 0.64
SF3B4-202ENST00000457312 PARD6AQ9NPB6 346 aa19.05■□□□□ 0.64
SF3B4-202ENST00000457312 CYP26B1Q9NR63 512 aa19.05■□□□□ 0.64
SF3B4-202ENST00000457312 POTEMA6NI47 508 aa19.04■□□□□ 0.64
SF3B4-202ENST00000457312 STK25O00506 426 aa19.04■□□□□ 0.64
SF3B4-202ENST00000457312 SLC30A4O14863 429 aa19.04■□□□□ 0.64
SF3B4-202ENST00000457312 PPFIA4O75335 1185 aa19.04■□□□□ 0.64
SF3B4-202ENST00000457312 EOMESO95936 686 aa19.04■□□□□ 0.64
SF3B4-202ENST00000457312 PROS1P07225 676 aa19.04■□□□□ 0.64
SF3B4-202ENST00000457312 DCNP07585 359 aaKnown RBP19.04■□□□□ 0.64
SF3B4-202ENST00000457312 SLC16A2P36021 539 aa19.04■□□□□ 0.64
SF3B4-202ENST00000457312 SHC2P98077 582 aa19.04■□□□□ 0.64
SF3B4-202ENST00000457312 ATP8B2P98198 1209 aa19.04■□□□□ 0.64
SF3B4-202ENST00000457312 APOBRQ0VD83 1088 aa19.04■□□□□ 0.64
SF3B4-202ENST00000457312 HSDL1Q3SXM5 330 aa19.04■□□□□ 0.64
SF3B4-202ENST00000457312 TTBK2Q6IQ55 1244 aa19.04■□□□□ 0.64
SF3B4-202ENST00000457312 POTEGQ6S5H5 508 aa19.04■□□□□ 0.64
SF3B4-202ENST00000457312 MAML2Q8IZL2 1156 aaPredicted RBP19.04■□□□□ 0.64
SF3B4-202ENST00000457312 PUS7LQ9H0K6 701 aaKnown RBP19.04■□□□□ 0.64
SF3B4-202ENST00000457312 TBC1D17Q9HA65 648 aa19.04■□□□□ 0.64
SF3B4-202ENST00000457312 SMG5Q9UPR3 1016 aaKnown RBP19.04■□□□□ 0.64
SF3B4-202ENST00000457312 C2orf16Q68DN1 1984 aa19.03■□□□□ 0.64
SF3B4-202ENST00000457312 HIDE1A8MVS5 230 aa19.03■□□□□ 0.64
SF3B4-202ENST00000457312 TSPY3P0CV98 308 aa19.03■□□□□ 0.64
SF3B4-202ENST00000457312 TSPY8P0CW00 308 aa19.03■□□□□ 0.64
SF3B4-202ENST00000457312 UBE3CQ15386 1083 aa19.03■□□□□ 0.64
SF3B4-202ENST00000457312 SYDE2Q5VT97 1194 aa19.03■□□□□ 0.64
SF3B4-202ENST00000457312 KIAA1841Q6NSI8 718 aa19.03■□□□□ 0.64
SF3B4-202ENST00000457312 SECISBP2LQ93073 1101 aaKnown RBP19.03■□□□□ 0.64
SF3B4-202ENST00000457312 PCDHB12Q9Y5F1 795 aa19.03■□□□□ 0.64
SF3B4-202ENST00000457312 HELZ2Q9BYK8 2649 aaKnown RBP19.02■□□□□ 0.64
SF3B4-202ENST00000457312 GSG1L2A8MUP6 293 aa19.02■□□□□ 0.64
SF3B4-202ENST00000457312 NARSO43776 548 aaKnown RBP19.02■□□□□ 0.64
SF3B4-202ENST00000457312 RFX1P22670 979 aa19.02■□□□□ 0.64
SF3B4-202ENST00000457312 MGAT3Q09327 533 aa19.02■□□□□ 0.64
SF3B4-202ENST00000457312 CCDC96Q2M329 555 aa19.02■□□□□ 0.64
SF3B4-202ENST00000457312 BTNL9Q6UXG8 535 aa19.02■□□□□ 0.64
SF3B4-202ENST00000457312 ZNF287Q9HBT7 754 aa19.02■□□□□ 0.64
SF3B4-202ENST00000457312 TMEM260Q9NX78 707 aa19.02■□□□□ 0.64
SF3B4-202ENST00000457312 DBR1Q9UK59 544 aaKnown RBP19.02■□□□□ 0.64
SF3B4-202ENST00000457312 HCFC2Q9Y5Z7 792 aa19.02■□□□□ 0.64
SF3B4-202ENST00000457312 MRVI1Q9Y6F6 885 aa19.02■□□□□ 0.64
SF3B4-202ENST00000457312 SORBS3O60504 671 aa19.01■□□□□ 0.63
SF3B4-202ENST00000457312 RARSP54136 660 aaKnown RBP19.01■□□□□ 0.63
SF3B4-202ENST00000457312 MYSM1Q5VVJ2 828 aa19.01■□□□□ 0.63
SF3B4-202ENST00000457312 NETO1Q8TDF5 533 aa19.01■□□□□ 0.63
SF3B4-202ENST00000457312 SPATA33Q96N06 139 aa19.01■□□□□ 0.63
SF3B4-202ENST00000457312 TCF25Q9BQ70 676 aa19.01■□□□□ 0.63
SF3B4-202ENST00000457312 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.01■□□□□ 0.63
SF3B4-202ENST00000457312 EPB41L4AQ9HCS5 686 aaPredicted RBP19.01■□□□□ 0.63
SF3B4-202ENST00000457312 PAG1Q9NWQ8 432 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms