RNA–Protein interactions for RNA: ENST00000457270.5

TOP3B-214, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 2,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-214ENST00000457270 DDX42Q86XP3 938 aaKnown RBP eCLIP15.43■□□□□ 0.06
TOP3B-214ENST00000457270 ATXN2LQ8WWM7 1075 aaKnown RBP15.43■□□□□ 0.06
TOP3B-214ENST00000457270 ANKRD27Q96NW4 1050 aa15.43■□□□□ 0.06
TOP3B-214ENST00000457270 PACSIN2Q9UNF0 486 aaPredicted RBP15.43■□□□□ 0.06
TOP3B-214ENST00000457270 DUOX1Q9NRD9 1551 aa15.43■□□□□ 0.06
TOP3B-214ENST00000457270 C1orf167Q5SNV9 1468 aa15.43■□□□□ 0.06
TOP3B-214ENST00000457270 A6NHS1 94 aa15.43■□□□□ 0.06
TOP3B-214ENST00000457270 LUC7L3O95232 432 aaKnown RBP15.43■□□□□ 0.06
TOP3B-214ENST00000457270 FLT3P36888 993 aa15.43■□□□□ 0.06
TOP3B-214ENST00000457270 RPS6KA1Q15418 735 aa15.43■□□□□ 0.06
TOP3B-214ENST00000457270 SLC18A3Q16572 532 aa15.43■□□□□ 0.06
TOP3B-214ENST00000457270 CCDC178Q5BJE1 867 aa15.43■□□□□ 0.06
TOP3B-214ENST00000457270 SRBD1Q8N5C6 995 aaKnown RBP15.43■□□□□ 0.06
TOP3B-214ENST00000457270 FAM89AQ96GI7 184 aa15.43■□□□□ 0.06
TOP3B-214ENST00000457270 NLRP2Q9NX02 1062 aa15.43■□□□□ 0.06
TOP3B-214ENST00000457270 LAD1O00515 517 aa15.42■□□□□ 0.06
TOP3B-214ENST00000457270 FCER1AP12319 257 aa15.42■□□□□ 0.06
TOP3B-214ENST00000457270 RNASE9P60153 205 aaKnown RBP15.42■□□□□ 0.06
TOP3B-214ENST00000457270 GNPTABQ3T906 1256 aa15.42■□□□□ 0.06
TOP3B-214ENST00000457270 CWF19L1Q69YN2 538 aaKnown RBP15.42■□□□□ 0.06
TOP3B-214ENST00000457270 HOOK3Q86VS8 718 aa15.42■□□□□ 0.06
TOP3B-214ENST00000457270 MFN1Q8IWA4 741 aa15.42■□□□□ 0.06
TOP3B-214ENST00000457270 ANKS1AQ92625 1134 aa15.42■□□□□ 0.06
TOP3B-214ENST00000457270 PAPOLBQ9NRJ5 636 aaKnown RBP15.42■□□□□ 0.06
TOP3B-214ENST00000457270 SAMD15Q9P1V8 674 aa15.42■□□□□ 0.06
TOP3B-214ENST00000457270 CEP72Q9P209 647 aa15.42■□□□□ 0.06
TOP3B-214ENST00000457270 ADAMTS3O15072 1205 aa15.42■□□□□ 0.06
TOP3B-214ENST00000457270 DIAPH2O60879 1101 aa15.42■□□□□ 0.06
TOP3B-214ENST00000457270 MMP13P45452 471 aa15.42■□□□□ 0.06
TOP3B-214ENST00000457270 USP11P51784 963 aa15.42■□□□□ 0.06
TOP3B-214ENST00000457270 SEPT2Q15019 361 aa15.42■□□□□ 0.06
TOP3B-214ENST00000457270 SFMBT2Q5VUG0 894 aa15.42■□□□□ 0.06
TOP3B-214ENST00000457270 BLIDQ8IZY5 108 aa15.42■□□□□ 0.06
TOP3B-214ENST00000457270 KIAA0895Q8NCT3 520 aa15.42■□□□□ 0.06
TOP3B-214ENST00000457270 MDM1Q8TC05 714 aa15.42■□□□□ 0.06
TOP3B-214ENST00000457270 TSC22D3Q99576 134 aa15.42■□□□□ 0.06
TOP3B-214ENST00000457270 SLITRK6Q9H5Y7 841 aa15.42■□□□□ 0.06
TOP3B-214ENST00000457270 FLT1P17948 1338 aa15.42■□□□□ 0.06
TOP3B-214ENST00000457270 TNS3Q68CZ2 1445 aa15.42■□□□□ 0.06
TOP3B-214ENST00000457270 GOLGA6L10A0A0M3HER8 536 aa15.42■□□□□ 0.06
TOP3B-214ENST00000457270 KCNK3O14649 394 aa15.42■□□□□ 0.06
TOP3B-214ENST00000457270 TLR2O60603 784 aa15.42■□□□□ 0.06
TOP3B-214ENST00000457270 PPFIA2O75334 1257 aa15.42■□□□□ 0.06
TOP3B-214ENST00000457270 MMEP08473 750 aa15.42■□□□□ 0.06
TOP3B-214ENST00000457270 FGFR2P21802 821 aa15.42■□□□□ 0.06
TOP3B-214ENST00000457270 ZNF131P52739 623 aa15.42■□□□□ 0.06
TOP3B-214ENST00000457270 ASIC1P78348 528 aa15.42■□□□□ 0.06
TOP3B-214ENST00000457270 EZH1Q92800 747 aaPredicted RBP15.42■□□□□ 0.06
TOP3B-214ENST00000457270 TXLNGYQ9BZA5 131 aa15.42■□□□□ 0.06
TOP3B-214ENST00000457270 ATP6V0A2Q9Y487 856 aa15.42■□□□□ 0.06
TOP3B-214ENST00000457270 MYH1P12882 1939 aa15.41■□□□□ 0.06
TOP3B-214ENST00000457270 CHN1P15882 459 aa15.41■□□□□ 0.06
TOP3B-214ENST00000457270 PUM3Q15397 648 aaKnown RBP15.41■□□□□ 0.06
TOP3B-214ENST00000457270 PGM2Q96G03 612 aa15.41■□□□□ 0.06
TOP3B-214ENST00000457270 AK8Q96MA6 479 aa15.41■□□□□ 0.06
TOP3B-214ENST00000457270 GREM2Q9H772 168 aa15.41■□□□□ 0.06
TOP3B-214ENST00000457270 FAM114A2Q9NRY5 505 aa15.41■□□□□ 0.06
TOP3B-214ENST00000457270 CHCHD3Q9NX63 227 aaKnown RBP15.41■□□□□ 0.06
TOP3B-214ENST00000457270 AGAP1Q9UPQ3 857 aa15.41■□□□□ 0.06
TOP3B-214ENST00000457270 KCPQ6ZWJ8 1503 aa15.41■□□□□ 0.06
TOP3B-214ENST00000457270 TRPM3Q9HCF6 1732 aaPredicted RBP15.41■□□□□ 0.06
TOP3B-214ENST00000457270 PGRMC1O00264 195 aaKnown RBP15.41■□□□□ 0.06
TOP3B-214ENST00000457270 LINGO3P0C6S8 592 aa15.41■□□□□ 0.06
TOP3B-214ENST00000457270 PLCG1P19174 1290 aa15.41■□□□□ 0.06
TOP3B-214ENST00000457270 DHX9Q08211 1270 aaKnown RBP15.41■□□□□ 0.06
TOP3B-214ENST00000457270 KIAA0753Q2KHM9 967 aa15.41■□□□□ 0.06
TOP3B-214ENST00000457270 THEMISQ8N1K5 641 aaPredicted RBP15.41■□□□□ 0.06
TOP3B-214ENST00000457270 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.41■□□□□ 0.068e-9■■□□□ 12.6
TOP3B-214ENST00000457270 SH3GLB2Q9NR46 395 aa15.41■□□□□ 0.06
TOP3B-214ENST00000457270 PNMA2Q9UL42 364 aa15.41■□□□□ 0.06
TOP3B-214ENST00000457270 G3BP2Q9UN86 482 aaKnown RBP15.41■□□□□ 0.06
TOP3B-214ENST00000457270 COQ9O75208 318 aa15.4■□□□□ 0.06
TOP3B-214ENST00000457270 ZBTB48P10074 688 aaPredicted RBP15.4■□□□□ 0.06
TOP3B-214ENST00000457270 GNAT1P11488 350 aa15.4■□□□□ 0.06
TOP3B-214ENST00000457270 FERP16591 822 aa15.4■□□□□ 0.06
TOP3B-214ENST00000457270 NCALDP61601 193 aa15.4■□□□□ 0.06
TOP3B-214ENST00000457270 AMPD3Q01432 767 aa15.4■□□□□ 0.06
TOP3B-214ENST00000457270 RASGRF1Q13972 1273 aa15.4■□□□□ 0.06
TOP3B-214ENST00000457270 FOXR2Q6PJQ5 311 aa15.4■□□□□ 0.06
TOP3B-214ENST00000457270 B4GALNT2Q8NHY0 566 aa15.4■□□□□ 0.06
TOP3B-214ENST00000457270 PLIN2Q99541 437 aa15.4■□□□□ 0.06
TOP3B-214ENST00000457270 TMEM60Q9H2L4 133 aa15.4■□□□□ 0.06
TOP3B-214ENST00000457270 DAPK3O43293 454 aa15.4■□□□□ 0.06
TOP3B-214ENST00000457270 SMIM24O75264 130 aa15.4■□□□□ 0.06
TOP3B-214ENST00000457270 NUDT17P0C025 328 aa15.4■□□□□ 0.06
TOP3B-214ENST00000457270 RARAP10276 462 aa15.4■□□□□ 0.06
TOP3B-214ENST00000457270 RANBP1P43487 201 aa15.4■□□□□ 0.06
TOP3B-214ENST00000457270 ALDH5A1P51649 535 aaPredicted RBP15.4■□□□□ 0.06
TOP3B-214ENST00000457270 KCNMA1Q12791 1236 aa15.4■□□□□ 0.06
TOP3B-214ENST00000457270 GALNTL6Q49A17 601 aa15.4■□□□□ 0.06
TOP3B-214ENST00000457270 LRRC34Q8IZ02 419 aa15.4■□□□□ 0.06
TOP3B-214ENST00000457270 TEX9Q8N6V9 391 aa15.4■□□□□ 0.06
TOP3B-214ENST00000457270 NSRP1Q9H0G5 558 aaKnown RBP15.4■□□□□ 0.06
TOP3B-214ENST00000457270 FAM205AQ6ZU69 1335 aa15.39■□□□□ 0.06
TOP3B-214ENST00000457270 PCP11498 1178 aaKnown RBP15.39■□□□□ 0.05
TOP3B-214ENST00000457270 HOXA7P31268 230 aaPredicted RBP15.39■□□□□ 0.05
TOP3B-214ENST00000457270 KCNJ2P63252 427 aa15.39■□□□□ 0.05
TOP3B-214ENST00000457270 ROR2Q01974 943 aaKnown RBP15.39■□□□□ 0.05
TOP3B-214ENST00000457270 LRRC63Q05C16 580 aa15.39■□□□□ 0.05
TOP3B-214ENST00000457270 FAM133BQ5BKY9 247 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms