RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 FAM43BQ6ZT52 329 aaPredicted RBP14.94□□□□□ -0.02
TOP3B-213ENST00000457179 CEP120Q8N960 986 aa14.94□□□□□ -0.02
TOP3B-213ENST00000457179 AENQ8WTP8 325 aaKnown RBP14.94□□□□□ -0.02
TOP3B-213ENST00000457179 LRRC1Q9BTT6 524 aa14.94□□□□□ -0.02
TOP3B-213ENST00000457179 SMARCAL1Q9NZC9 954 aa14.94□□□□□ -0.02
TOP3B-213ENST00000457179 TBC1D7Q9P0N9 293 aa14.94□□□□□ -0.02
TOP3B-213ENST00000457179 COL24A1Q17RW2 1714 aa14.94□□□□□ -0.02
TOP3B-213ENST00000457179 E7EVH7 732 aa14.94□□□□□ -0.02
TOP3B-213ENST00000457179 GCKP35557 465 aa14.94□□□□□ -0.02
TOP3B-213ENST00000457179 PBX1P40424 430 aa14.94□□□□□ -0.02
TOP3B-213ENST00000457179 TRAPPC10P48553 1259 aa14.94□□□□□ -0.02
TOP3B-213ENST00000457179 CALCRLQ16602 461 aa14.94□□□□□ -0.02
TOP3B-213ENST00000457179 ANKS1AQ92625 1134 aa14.94□□□□□ -0.02
TOP3B-213ENST00000457179 TBC1D31Q96DN5 1066 aa14.94□□□□□ -0.02
TOP3B-213ENST00000457179 HAUS2Q9NVX0 235 aa14.94□□□□□ -0.02
TOP3B-213ENST00000457179 EGFRP00533 1210 aa14.93□□□□□ -0.02
TOP3B-213ENST00000457179 LONP1P36776 959 aaKnown RBP14.93□□□□□ -0.02
TOP3B-213ENST00000457179 KLK7P49862 253 aa14.93□□□□□ -0.02
TOP3B-213ENST00000457179 CC2D2BQ6DHV5 1058 aa14.93□□□□□ -0.02
TOP3B-213ENST00000457179 STYK1Q6J9G0 422 aa14.93□□□□□ -0.02
TOP3B-213ENST00000457179 PPANQ9NQ55 473 aaKnown RBP14.93□□□□□ -0.02
TOP3B-213ENST00000457179 LRWD1Q9UFC0 647 aa14.93□□□□□ -0.02
TOP3B-213ENST00000457179 A0A1B0GUL6 1792 aa14.93□□□□□ -0.02
TOP3B-213ENST00000457179 GOLGA6L7A0A1B0GV03 622 aa14.93□□□□□ -0.02
TOP3B-213ENST00000457179 NKRFO15226 690 aaKnown RBP eCLIP14.93□□□□□ -0.02
TOP3B-213ENST00000457179 FCER1AP12319 257 aa14.93□□□□□ -0.02
TOP3B-213ENST00000457179 HPDP32754 393 aaPredicted RBP14.93□□□□□ -0.02
TOP3B-213ENST00000457179 CCDC121Q6ZUS5 278 aa14.93□□□□□ -0.02
TOP3B-213ENST00000457179 KRT25Q7Z3Z0 450 aa14.93□□□□□ -0.02
TOP3B-213ENST00000457179 PARP9Q8IXQ6 854 aa14.93□□□□□ -0.02
TOP3B-213ENST00000457179 NUDT12Q9BQG2 462 aa14.93□□□□□ -0.02
TOP3B-213ENST00000457179 LZTS2Q9BRK4 669 aa14.93□□□□□ -0.02
TOP3B-213ENST00000457179 RWDD2AQ9UIY3 292 aa14.93□□□□□ -0.02
TOP3B-213ENST00000457179 ROBO3Q96MS0 1386 aa14.93□□□□□ -0.02
TOP3B-213ENST00000457179 CASZ1Q86V15 1759 aa14.92□□□□□ -0.02
TOP3B-213ENST00000457179 A0A1W2PRG0 241 aa14.92□□□□□ -0.02
TOP3B-213ENST00000457179 CFBP00751 764 aa14.92□□□□□ -0.02
TOP3B-213ENST00000457179 CRYMQ14894 314 aa14.92□□□□□ -0.02
TOP3B-213ENST00000457179 R3HDM1Q15032 1099 aaKnown RBP14.92□□□□□ -0.02
TOP3B-213ENST00000457179 CDC37Q16543 378 aaPredicted RBP14.92□□□□□ -0.02
TOP3B-213ENST00000457179 ASPRV1Q53RT3 343 aa14.92□□□□□ -0.02
TOP3B-213ENST00000457179 TMED8Q6PL24 325 aaPredicted RBP14.92□□□□□ -0.02
TOP3B-213ENST00000457179 CCDC51Q96ER9 411 aa14.92□□□□□ -0.02
TOP3B-213ENST00000457179 GLIS2Q9BZE0 524 aaPredicted RBP14.92□□□□□ -0.02
TOP3B-213ENST00000457179 KANSL2Q9H9L4 492 aa14.92□□□□□ -0.02
TOP3B-213ENST00000457179 PKD2L1Q9P0L9 805 aa14.92□□□□□ -0.02
TOP3B-213ENST00000457179 SWAP70Q9UH65 585 aa14.92□□□□□ -0.02
TOP3B-213ENST00000457179 DUSP10Q9Y6W6 482 aa14.92□□□□□ -0.02
TOP3B-213ENST00000457179 B4DLN1 442 aa14.92□□□□□ -0.02
TOP3B-213ENST00000457179 OPLAHO14841 1288 aa14.92□□□□□ -0.02
TOP3B-213ENST00000457179 BACH1O14867 736 aa14.92□□□□□ -0.02
TOP3B-213ENST00000457179 RASSF9O75901 435 aa14.92□□□□□ -0.02
TOP3B-213ENST00000457179 NDUFB10O96000 172 aa14.92□□□□□ -0.02
TOP3B-213ENST00000457179 PDE4DQ08499 809 aa14.92□□□□□ -0.02
TOP3B-213ENST00000457179 CYB5D1Q6P9G0 228 aa14.92□□□□□ -0.02
TOP3B-213ENST00000457179 CCT8L2Q96SF2 557 aa14.92□□□□□ -0.02
TOP3B-213ENST00000457179 SLC39A2Q9NP94 309 aa14.92□□□□□ -0.02
TOP3B-213ENST00000457179 HOMER2Q9NSB8 354 aa14.92□□□□□ -0.02
TOP3B-213ENST00000457179 JDP2Q8WYK2 163 aa14.91□□□□□ -0.02
TOP3B-213ENST00000457179 ZIM3Q96PE6 472 aa14.91□□□□□ -0.02
TOP3B-213ENST00000457179 EPN3Q9H201 632 aa14.91□□□□□ -0.02
TOP3B-213ENST00000457179 SUGT1Q9Y2Z0 365 aa14.91□□□□□ -0.02
TOP3B-213ENST00000457179 PNMA6FA0A0J9YX94 578 aa14.91□□□□□ -0.02
TOP3B-213ENST00000457179 TTC26A0AVF1 554 aa14.91□□□□□ -0.02
TOP3B-213ENST00000457179 IRF6O14896 467 aa14.91□□□□□ -0.02
TOP3B-213ENST00000457179 ZBTB5O15062 677 aa14.91□□□□□ -0.02
TOP3B-213ENST00000457179 CXCR5P32302 372 aa14.91□□□□□ -0.02
TOP3B-213ENST00000457179 STAT3P40763 770 aa14.91□□□□□ -0.02
TOP3B-213ENST00000457179 PRR16Q569H4 304 aa14.91□□□□□ -0.02
TOP3B-213ENST00000457179 WLSQ5T9L3 541 aa14.91□□□□□ -0.02
TOP3B-213ENST00000457179 NIM1KQ8IY84 436 aa14.91□□□□□ -0.02
TOP3B-213ENST00000457179 CPXCR1Q8N123 301 aa14.91□□□□□ -0.02
TOP3B-213ENST00000457179 SNX29Q8TEQ0 813 aa14.91□□□□□ -0.02
TOP3B-213ENST00000457179 C7orf43Q8WVR3 580 aa14.91□□□□□ -0.02
TOP3B-213ENST00000457179 CALR3Q96L12 384 aaKnown RBP14.91□□□□□ -0.02
TOP3B-213ENST00000457179 HAUS4Q9H6D7 363 aa14.91□□□□□ -0.02
TOP3B-213ENST00000457179 SH3GLB2Q9NR46 395 aa14.91□□□□□ -0.02
TOP3B-213ENST00000457179 FBXO28Q9NVF7 368 aa14.91□□□□□ -0.02
TOP3B-213ENST00000457179 RMND1Q9NWS8 449 aa14.91□□□□□ -0.02
TOP3B-213ENST00000457179 EHD2Q9NZN4 543 aa14.91□□□□□ -0.02
TOP3B-213ENST00000457179 TBC1D8BQ0IIM8 1120 aa14.91□□□□□ -0.02
TOP3B-213ENST00000457179 SF3A3Q12874 501 aaKnown RBP eCLIP14.91□□□□□ -0.029e-7■■■■□ 23.9
TOP3B-213ENST00000457179 LRRC41Q15345 812 aa14.91□□□□□ -0.02
TOP3B-213ENST00000457179 SPRED3Q2MJR0 410 aa14.91□□□□□ -0.02
TOP3B-213ENST00000457179 ARL6IP4Q66PJ3 421 aaKnown RBP14.91□□□□□ -0.02
TOP3B-213ENST00000457179 SAMD7Q7Z3H4 446 aa14.91□□□□□ -0.02
TOP3B-213ENST00000457179 NLRP14Q86W24 1093 aa14.91□□□□□ -0.02
TOP3B-213ENST00000457179 SPATS2Q86XZ4 545 aaKnown RBP14.91□□□□□ -0.02
TOP3B-213ENST00000457179 IRF2BP1Q8IU81 584 aa14.91□□□□□ -0.02
TOP3B-213ENST00000457179 TBC1D5Q92609 795 aa14.91□□□□□ -0.02
TOP3B-213ENST00000457179 CUL5Q93034 780 aa14.91□□□□□ -0.02
TOP3B-213ENST00000457179 DHX36Q9H2U1 1008 aaKnown RBP14.91□□□□□ -0.02
TOP3B-213ENST00000457179 RIOX1Q9H6W3 641 aa14.91□□□□□ -0.02
TOP3B-213ENST00000457179 TPX2Q9ULW0 747 aaKnown RBP14.91□□□□□ -0.02
TOP3B-213ENST00000457179 HERVK_113P62684 666 aa14.9□□□□□ -0.02
TOP3B-213ENST00000457179 SKOR1P84550 965 aa14.9□□□□□ -0.02
TOP3B-213ENST00000457179 STK4Q13043 487 aa14.9□□□□□ -0.02
TOP3B-213ENST00000457179 TBC1D10BQ4KMP7 808 aaPredicted RBP14.9□□□□□ -0.02
TOP3B-213ENST00000457179 FAM228AQ86W67 206 aa14.9□□□□□ -0.02
TOP3B-213ENST00000457179 CSGALNACT2Q8N6G5 542 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms