RNA–Protein interactions for RNA: ENST00000457104.6

VEGFA-210, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-210ENST00000457104 MXRA8Q9BRK3 442 aa14.17□□□□□ -0.14
VEGFA-210ENST00000457104 ANO3Q9BYT9 981 aa14.17□□□□□ -0.14
VEGFA-210ENST00000457104 SETD4Q9NVD3 440 aa14.17□□□□□ -0.14
VEGFA-210ENST00000457104 TMEM260Q9NX78 707 aa14.17□□□□□ -0.14
VEGFA-210ENST00000457104 VCANP13611 3396 aa14.17□□□□□ -0.14
VEGFA-210ENST00000457104 MYH9P35579 1960 aaKnown RBP14.16□□□□□ -0.14
VEGFA-210ENST00000457104 CCDC196A0A1B0GTZ2 297 aa14.16□□□□□ -0.14
VEGFA-210ENST00000457104 FOSP01100 380 aaPredicted RBP14.16□□□□□ -0.14
VEGFA-210ENST00000457104 SCG2P13521 617 aa14.16□□□□□ -0.14
VEGFA-210ENST00000457104 SREBF1P36956 1147 aa14.16□□□□□ -0.14
VEGFA-210ENST00000457104 WDR5P61964 334 aaKnown RBP14.16□□□□□ -0.14
VEGFA-210ENST00000457104 ADGRE1Q14246 886 aa14.16□□□□□ -0.14
VEGFA-210ENST00000457104 CNKSR3Q6P9H4 555 aa14.16□□□□□ -0.14
VEGFA-210ENST00000457104 HERC6Q8IVU3 1022 aa14.16□□□□□ -0.14
VEGFA-210ENST00000457104 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.16□□□□□ -0.143e-13■■□□□ 13.7
VEGFA-210ENST00000457104 USP38Q8NB14 1042 aa14.16□□□□□ -0.14
VEGFA-210ENST00000457104 OSBPL7Q9BZF2 842 aa14.16□□□□□ -0.14
VEGFA-210ENST00000457104 ZSWIM6Q9HCJ5 1215 aa14.16□□□□□ -0.14
VEGFA-210ENST00000457104 KCNH7Q9NS40 1196 aa14.16□□□□□ -0.14
VEGFA-210ENST00000457104 PKD2L1Q9P0L9 805 aa14.16□□□□□ -0.14
VEGFA-210ENST00000457104 MEIS1O00470 390 aa14.15□□□□□ -0.14
VEGFA-210ENST00000457104 PRPF3O43395 683 aaKnown RBP14.15□□□□□ -0.14
VEGFA-210ENST00000457104 ARHGEF15O94989 841 aa14.15□□□□□ -0.14
VEGFA-210ENST00000457104 CA3P07451 260 aa14.15□□□□□ -0.14
VEGFA-210ENST00000457104 ARP10275 920 aa14.15□□□□□ -0.14
VEGFA-210ENST00000457104 PSMA5P28066 241 aa14.15□□□□□ -0.14
VEGFA-210ENST00000457104 PDIA3P30101 505 aaKnown RBP14.15□□□□□ -0.14
VEGFA-210ENST00000457104 THPOP40225 353 aa14.15□□□□□ -0.14
VEGFA-210ENST00000457104 MKRN4PQ13434 485 aaPredicted RBP14.15□□□□□ -0.14
VEGFA-210ENST00000457104 TOB2Q14106 344 aaPredicted RBP14.15□□□□□ -0.14
VEGFA-210ENST00000457104 PPP2R2DQ66LE6 453 aa14.15□□□□□ -0.14
VEGFA-210ENST00000457104 RUFY3Q7L099 469 aa14.15□□□□□ -0.14
VEGFA-210ENST00000457104 LMBR1Q8WVP7 490 aa14.15□□□□□ -0.14
VEGFA-210ENST00000457104 CRYGNQ8WXF5 182 aa14.15□□□□□ -0.14
VEGFA-210ENST00000457104 SEPT1Q8WYJ6 367 aa14.15□□□□□ -0.14
VEGFA-210ENST00000457104 PHKBQ93100 1093 aa14.15□□□□□ -0.14
VEGFA-210ENST00000457104 PCYT2Q99447 389 aa14.15□□□□□ -0.14
VEGFA-210ENST00000457104 ZMYND12Q9H0C1 365 aa14.15□□□□□ -0.14
VEGFA-210ENST00000457104 EHMT1Q9H9B1 1298 aa14.15□□□□□ -0.14
VEGFA-210ENST00000457104 ZNF215Q9UL58 517 aaPredicted RBP14.15□□□□□ -0.14
VEGFA-210ENST00000457104 EVPLQ92817 2033 aa14.14□□□□□ -0.15
VEGFA-210ENST00000457104 ABHD14A-ACY1A0A1B0GW23 586 aa14.14□□□□□ -0.15
VEGFA-210ENST00000457104 ESYT2A0FGR8 921 aa14.14□□□□□ -0.15
VEGFA-210ENST00000457104 RSPH10B2B2RC85 870 aa14.14□□□□□ -0.15
VEGFA-210ENST00000457104 DLL1O00548 723 aa14.14□□□□□ -0.15
VEGFA-210ENST00000457104 RSPH10BP0C881 870 aa14.14□□□□□ -0.15
VEGFA-210ENST00000457104 DEFB103AP81534 67 aa14.14□□□□□ -0.15
VEGFA-210ENST00000457104 ITGB3BPQ13352 177 aaPredicted RBP14.14□□□□□ -0.15
VEGFA-210ENST00000457104 AP3B2Q13367 1082 aa14.14□□□□□ -0.15
VEGFA-210ENST00000457104 CEP55Q53EZ4 464 aa14.14□□□□□ -0.15
VEGFA-210ENST00000457104 TMCO2Q7Z6W1 182 aaPredicted RBP14.14□□□□□ -0.15
VEGFA-210ENST00000457104 GLT8D2Q9H1C3 349 aa14.14□□□□□ -0.15
VEGFA-210ENST00000457104 NCOA5Q9HCD5 579 aaKnown RBP14.14□□□□□ -0.15
VEGFA-210ENST00000457104 PPP4R2Q9NY27 417 aa14.14□□□□□ -0.15
VEGFA-210ENST00000457104 NFASCO94856 1347 aa14.14□□□□□ -0.15
VEGFA-210ENST00000457104 NRCAMQ92823 1304 aa14.14□□□□□ -0.15
VEGFA-210ENST00000457104 COL4A4P53420 1690 aaPredicted RBP14.14□□□□□ -0.15
VEGFA-210ENST00000457104 PPFIA3O75145 1194 aa14.13□□□□□ -0.15
VEGFA-210ENST00000457104 LGR5O75473 907 aa14.13□□□□□ -0.15
VEGFA-210ENST00000457104 GNAT1P11488 350 aa14.13□□□□□ -0.15
VEGFA-210ENST00000457104 IFNAR1P17181 557 aa14.13□□□□□ -0.15
VEGFA-210ENST00000457104 KCNJ6P48051 423 aa14.13□□□□□ -0.15
VEGFA-210ENST00000457104 ARHGAP4P98171 946 aa14.13□□□□□ -0.15
VEGFA-210ENST00000457104 TAP1Q03518 808 aa14.13□□□□□ -0.15
VEGFA-210ENST00000457104 IKBKEQ14164 716 aa14.13□□□□□ -0.15
VEGFA-210ENST00000457104 PLEKHG4Q58EX7 1191 aa14.13□□□□□ -0.15
VEGFA-210ENST00000457104 JAKMIP3Q5VZ66 844 aa14.13□□□□□ -0.15
VEGFA-210ENST00000457104 DBF4BQ8NFT6 615 aa14.13□□□□□ -0.15
VEGFA-210ENST00000457104 GAS2L1Q99501 681 aaPredicted RBP14.13□□□□□ -0.15
VEGFA-210ENST00000457104 TM6SF1Q9BZW5 370 aa14.13□□□□□ -0.15
VEGFA-210ENST00000457104 SMARCAD1Q9H4L7 1026 aa14.13□□□□□ -0.15
VEGFA-210ENST00000457104 AGO4Q9HCK5 861 aaKnown RBP14.13□□□□□ -0.15
VEGFA-210ENST00000457104 JPH1Q9HDC5 661 aaPredicted RBP14.13□□□□□ -0.15
VEGFA-210ENST00000457104 ERAP1Q9NZ08 941 aa14.13□□□□□ -0.15
VEGFA-210ENST00000457104 SLC9A2Q9UBY0 812 aa14.13□□□□□ -0.15
VEGFA-210ENST00000457104 EMSYQ7Z589 1322 aa14.13□□□□□ -0.15
VEGFA-210ENST00000457104 CUL9Q8IWT3 2517 aa14.12□□□□□ -0.15
VEGFA-210ENST00000457104 XIRP2A4UGR9 3374 aa14.12□□□□□ -0.15
VEGFA-210ENST00000457104 IGLV3-22A0A075B6J6 115 aa14.12□□□□□ -0.15
VEGFA-210ENST00000457104 FAM86B1E9PN63 330 aa14.12□□□□□ -0.15
VEGFA-210ENST00000457104 CAND2O75155 1236 aa14.12□□□□□ -0.15
VEGFA-210ENST00000457104 ATG7O95352 703 aa14.12□□□□□ -0.15
VEGFA-210ENST00000457104 CYP3A4P08684 503 aa14.12□□□□□ -0.15
VEGFA-210ENST00000457104 FAM86B2P0C5J1 330 aa14.12□□□□□ -0.15
VEGFA-210ENST00000457104 MARK3P27448 753 aa14.12□□□□□ -0.15
VEGFA-210ENST00000457104 ACTR2P61160 394 aa14.12□□□□□ -0.15
VEGFA-210ENST00000457104 CCT2P78371 535 aaKnown RBP14.12□□□□□ -0.15
VEGFA-210ENST00000457104 FAM26DQ5JW98 314 aa14.12□□□□□ -0.15
VEGFA-210ENST00000457104 MARCH8Q5T0T0 291 aa14.12□□□□□ -0.15
VEGFA-210ENST00000457104 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.12□□□□□ -0.155e-35■■■□□ 16.9
VEGFA-210ENST00000457104 RUFY4Q6ZNE9 571 aa14.12□□□□□ -0.15
VEGFA-210ENST00000457104 NIPA1Q7RTP0 329 aa14.12□□□□□ -0.15
VEGFA-210ENST00000457104 SPRED2Q7Z698 418 aa14.12□□□□□ -0.15
VEGFA-210ENST00000457104 GLG1Q92896 1179 aa14.12□□□□□ -0.15
VEGFA-210ENST00000457104 LARP6Q9BRS8 491 aaKnown RBP14.12□□□□□ -0.15
VEGFA-210ENST00000457104 RNF26Q9BY78 433 aaPredicted RBP14.12□□□□□ -0.15
VEGFA-210ENST00000457104 CYP46A1Q9Y6A2 500 aa14.12□□□□□ -0.15
VEGFA-210ENST00000457104 PRRC2BQ5JSZ5 2229 aaKnown RBP14.12□□□□□ -0.15
VEGFA-210ENST00000457104 NLRC5Q86WI3 1866 aa14.12□□□□□ -0.15
VEGFA-210ENST00000457104 LCHNA4D1U4 455 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms