RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 ZFYP08048 801 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P4-201ENST00000455362 DPEP1P16444 411 aa6.06□□□□□ -1.44
HMGB1P4-201ENST00000455362 KCNA3P22001 575 aa6.06□□□□□ -1.44
HMGB1P4-201ENST00000455362 NME2P22392 152 aa6.06□□□□□ -1.44
HMGB1P4-201ENST00000455362 TARSP26639 723 aaKnown RBP6.06□□□□□ -1.44
HMGB1P4-201ENST00000455362 POLD1P28340 1107 aa6.06□□□□□ -1.44
HMGB1P4-201ENST00000455362 TGFB2P61812 414 aa6.06□□□□□ -1.44
HMGB1P4-201ENST00000455362 LAMC2Q13753 1193 aa6.06□□□□□ -1.44
HMGB1P4-201ENST00000455362 STAT4Q14765 748 aa6.06□□□□□ -1.44
HMGB1P4-201ENST00000455362 FAM209AQ5JX71 171 aa6.06□□□□□ -1.44
HMGB1P4-201ENST00000455362 ZMYM1Q5SVZ6 1142 aa6.06□□□□□ -1.44
HMGB1P4-201ENST00000455362 ACBD5Q5T8D3 534 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P4-201ENST00000455362 OLFM4Q6UX06 510 aa6.06□□□□□ -1.44
HMGB1P4-201ENST00000455362 KIAA1211Q6ZU35 1233 aa6.06□□□□□ -1.44
HMGB1P4-201ENST00000455362 LHFPL2Q6ZUX7 228 aa6.06□□□□□ -1.44
HMGB1P4-201ENST00000455362 SPICE1Q8N0Z3 855 aa6.06□□□□□ -1.44
HMGB1P4-201ENST00000455362 TDRD7Q8NHU6 1098 aaKnown RBP6.06□□□□□ -1.44
HMGB1P4-201ENST00000455362 TMEM40Q8WWA1 233 aa6.06□□□□□ -1.44
HMGB1P4-201ENST00000455362 GPR101Q96P66 508 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P4-201ENST00000455362 MTA3Q9BTC8 594 aa6.06□□□□□ -1.44
HMGB1P4-201ENST00000455362 GSX2Q9BZM3 304 aa6.06□□□□□ -1.44
HMGB1P4-201ENST00000455362 ZCCHC2Q9C0B9 1178 aaKnown RBP6.06□□□□□ -1.44
HMGB1P4-201ENST00000455362 LSG1Q9H089 658 aaKnown RBP6.06□□□□□ -1.44
HMGB1P4-201ENST00000455362 ZHX3Q9H4I2 956 aa6.06□□□□□ -1.44
HMGB1P4-201ENST00000455362 OBP2AQ9NY56 170 aa6.06□□□□□ -1.44
HMGB1P4-201ENST00000455362 MAP3K20Q9NYL2 800 aaKnown RBP6.06□□□□□ -1.44
HMGB1P4-201ENST00000455362 TRHDEQ9UKU6 1024 aa6.06□□□□□ -1.44
HMGB1P4-201ENST00000455362 DENND2AQ9ULE3 1009 aa6.06□□□□□ -1.44
HMGB1P4-201ENST00000455362 PCDHB10Q9UN67 800 aa6.06□□□□□ -1.44
HMGB1P4-201ENST00000455362 POLR3KQ9Y2Y1 108 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P4-201ENST00000455362 RPS6KL1Q9Y6S9 549 aa6.06□□□□□ -1.44
HMGB1P4-201ENST00000455362 DLEC1Q9Y238 1755 aa6.06□□□□□ -1.44
HMGB1P4-201ENST00000455362 LTBP1Q14766 1721 aa6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 PDS5AQ29RF7 1337 aaKnown RBP6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 DOCK2Q92608 1830 aa6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 TCRBV5S4A2TA0A5A2 114 aa6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 FIGNL2A6NMB9 653 aa6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 MEIS3P2A8K0S8 358 aa6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 VSTM5A8MXK1 200 aa6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 NPTXRO95502 500 aa6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 BMP6P22004 513 aa6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 MAN1A1P33908 653 aa6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 ADD2P35612 726 aa6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 TRAPPC10P48553 1259 aa6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 NEK3P51956 506 aa6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 TMPRSS15P98073 1019 aa6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 PTH1RQ03431 593 aa6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 DHCR24Q15392 516 aa6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 TMEM95Q3KNT9 176 aa6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 SV2CQ496J9 727 aa6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 MCMDC2Q4G0Z9 681 aa6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 SLC9C2Q5TAH2 1124 aa6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 RASIP1Q5U651 963 aa6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 IL31Q6EBC2 164 aa6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 CXorf57Q6NSI4 855 aaKnown RBP6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 ZSCAN25Q6NSZ9 544 aa6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 DPP8Q6V1X1 898 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 UNC5AQ6ZN44 842 aa6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 ZNF804AQ7Z570 1209 aa6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 TAB3Q8N5C8 712 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 TTLL6Q8N841 843 aa6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 USP7Q93009 1102 aa6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 OSBP2Q969R2 916 aa6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 SEC62Q99442 399 aaKnown RBP6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 EMILIN2Q9BXX0 1053 aa6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 BHLHE41Q9C0J9 482 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 PTPRHQ9HD43 1115 aa6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 ATP13A2Q9NQ11 1180 aa6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 HELLSQ9NRZ9 838 aa6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 GMPR2Q9P2T1 348 aaKnown RBP6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 IP6K2Q9UHH9 426 aa6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 LZTS1Q9Y250 596 aa6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 PCDHGC4Q9Y5F7 938 aa6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 GOLGB1Q14789 3259 aaKnown RBP6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 MED23Q9ULK4 1368 aa6.05□□□□□ -1.44
HMGB1P4-201ENST00000455362 RAD50Q92878 1312 aa6.04□□□□□ -1.44
HMGB1P4-201ENST00000455362 FRAT2O75474 233 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P4-201ENST00000455362 IDH1O75874 414 aaKnown RBP6.04□□□□□ -1.44
HMGB1P4-201ENST00000455362 IL1R1P14778 569 aa6.04□□□□□ -1.44
HMGB1P4-201ENST00000455362 PDE6AP16499 860 aa6.04□□□□□ -1.44
HMGB1P4-201ENST00000455362 NFKB1P19838 968 aa6.04□□□□□ -1.44
HMGB1P4-201ENST00000455362 ANP32AP39687 249 aaKnown RBP6.04□□□□□ -1.44
HMGB1P4-201ENST00000455362 PPM1FP49593 454 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P4-201ENST00000455362 SLC7A5Q01650 507 aa6.04□□□□□ -1.44
HMGB1P4-201ENST00000455362 MAP3K12Q12852 859 aa6.04□□□□□ -1.44
HMGB1P4-201ENST00000455362 SFSWAPQ12872 951 aaKnown RBP6.04□□□□□ -1.44
HMGB1P4-201ENST00000455362 HSP90AA2PQ14568 343 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P4-201ENST00000455362 UBE3CQ15386 1083 aa6.04□□□□□ -1.44
HMGB1P4-201ENST00000455362 MAPRE1Q15691 268 aaKnown RBP6.04□□□□□ -1.44
HMGB1P4-201ENST00000455362 SYDE2Q5VT97 1194 aa6.04□□□□□ -1.44
HMGB1P4-201ENST00000455362 ANO1Q5XXA6 986 aa6.04□□□□□ -1.44
HMGB1P4-201ENST00000455362 CCDC129Q6ZRS4 1044 aa6.04□□□□□ -1.44
HMGB1P4-201ENST00000455362 ZNF589Q86UQ0 364 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P4-201ENST00000455362 SULF2Q8IWU5 870 aa6.04□□□□□ -1.44
HMGB1P4-201ENST00000455362 SCUBE1Q8IWY4 988 aa6.04□□□□□ -1.44
HMGB1P4-201ENST00000455362 SMAP1Q8IYB5 467 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P4-201ENST00000455362 CNTD1Q8N815 330 aa6.04□□□□□ -1.44
HMGB1P4-201ENST00000455362 MAP4K1Q92918 833 aa6.04□□□□□ -1.44
HMGB1P4-201ENST00000455362 TTC1Q99614 292 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms