RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 ASTE1Q2TB18 679 aaPredicted RBP20.35■□□□□ 0.85
PTPA-223ENST00000452489 PREBQ9HCU5 417 aa20.35■□□□□ 0.85
PTPA-223ENST00000452489 FGFR1OP2Q9NVK5 253 aa20.35■□□□□ 0.85
PTPA-223ENST00000452489 AMACRQ9UHK6 382 aa20.35■□□□□ 0.85
PTPA-223ENST00000452489 PARP4Q9UKK3 1724 aaKnown RBP20.35■□□□□ 0.85
PTPA-223ENST00000452489 ATP6V1G1O75348 118 aa20.34■□□□□ 0.85
PTPA-223ENST00000452489 TPBGLP0DKB5 382 aa20.34■□□□□ 0.85
PTPA-223ENST00000452489 MYH6P13533 1939 aa20.34■□□□□ 0.85
PTPA-223ENST00000452489 GM2AP17900 193 aa20.34■□□□□ 0.85
PTPA-223ENST00000452489 DTNBP1Q96EV8 351 aa20.34■□□□□ 0.85
PTPA-223ENST00000452489 GOLPH3Q9H4A6 298 aa20.34■□□□□ 0.85
PTPA-223ENST00000452489 MMRN2Q9H8L6 949 aa20.34■□□□□ 0.85
PTPA-223ENST00000452489 ZWILCHQ9H900 591 aa20.34■□□□□ 0.85
PTPA-223ENST00000452489 PHF24Q9UPV7 400 aa20.34■□□□□ 0.85
PTPA-223ENST00000452489 RNMTO43148 476 aaKnown RBP20.34■□□□□ 0.85
PTPA-223ENST00000452489 LIFRP42702 1097 aa20.34■□□□□ 0.85
PTPA-223ENST00000452489 TMEM62Q0P6H9 643 aa20.34■□□□□ 0.85
PTPA-223ENST00000452489 KIAA0753Q2KHM9 967 aa20.34■□□□□ 0.85
PTPA-223ENST00000452489 AZI2Q9H6S1 392 aa20.34■□□□□ 0.85
PTPA-223ENST00000452489 ABCF2Q9UG63 623 aa20.34■□□□□ 0.85
PTPA-223ENST00000452489 TOPAZ1Q8N9V7 1692 aa20.34■□□□□ 0.85
PTPA-223ENST00000452489 BHMG1C9JSJ3 638 aaPredicted RBP20.33■□□□□ 0.85
PTPA-223ENST00000452489 H0Y3Z8 333 aa20.33■□□□□ 0.85
PTPA-223ENST00000452489 PABPC1LQ4VXU2 614 aaKnown RBP20.33■□□□□ 0.85
PTPA-223ENST00000452489 TDRD12Q587J7 1177 aaKnown RBP20.33■□□□□ 0.85
PTPA-223ENST00000452489 ACBD5Q5T8D3 534 aaPredicted RBP20.33■□□□□ 0.85
PTPA-223ENST00000452489 ANKRD40Q6AI12 368 aa20.33■□□□□ 0.85
PTPA-223ENST00000452489 APBB1IPQ7Z5R6 666 aaPredicted RBP20.33■□□□□ 0.85
PTPA-223ENST00000452489 SCFD2Q8WU76 684 aa20.33■□□□□ 0.85
PTPA-223ENST00000452489 NDNQ99608 321 aa20.33■□□□□ 0.85
PTPA-223ENST00000452489 GPR108Q9NPR9 543 aa20.33■□□□□ 0.85
PTPA-223ENST00000452489 DISP2A7MBM2 1401 aa20.33■□□□□ 0.85
PTPA-223ENST00000452489 PDLIM1O00151 329 aa20.33■□□□□ 0.84
PTPA-223ENST00000452489 ATP2C1P98194 919 aaPredicted RBP20.33■□□□□ 0.84
PTPA-223ENST00000452489 AKAP4Q5JQC9 854 aa20.33■□□□□ 0.84
PTPA-223ENST00000452489 TTC38Q5R3I4 469 aa20.33■□□□□ 0.84
PTPA-223ENST00000452489 ZSCAN29Q8IWY8 852 aaPredicted RBP20.33■□□□□ 0.84
PTPA-223ENST00000452489 DNAJC9Q8WXX5 260 aa20.33■□□□□ 0.84
PTPA-223ENST00000452489 CELF4Q9BZC1 486 aaKnown RBP20.33■□□□□ 0.84
PTPA-223ENST00000452489 TRIM31Q9BZY9 425 aa20.33■□□□□ 0.84
PTPA-223ENST00000452489 SIK3Q9Y2K2 1263 aa20.33■□□□□ 0.84
PTPA-223ENST00000452489 TACC3Q9Y6A5 838 aa20.33■□□□□ 0.84
PTPA-223ENST00000452489 SLC4A4Q9Y6R1 1079 aa20.33■□□□□ 0.84
PTPA-223ENST00000452489 CEP104O60308 925 aa20.32■□□□□ 0.84
PTPA-223ENST00000452489 ACADSP16219 412 aa20.32■□□□□ 0.84
PTPA-223ENST00000452489 PDE6CP51160 858 aa20.32■□□□□ 0.84
PTPA-223ENST00000452489 LRRC14Q15048 493 aa20.32■□□□□ 0.84
PTPA-223ENST00000452489 HOOK3Q86VS8 718 aa20.32■□□□□ 0.84
PTPA-223ENST00000452489 GBP7Q8N8V2 638 aaPredicted RBP20.32■□□□□ 0.84
PTPA-223ENST00000452489 STK32AQ8WU08 396 aa20.32■□□□□ 0.84
PTPA-223ENST00000452489 DDX23Q9BUQ8 820 aaKnown RBP20.32■□□□□ 0.84
PTPA-223ENST00000452489 PUS3Q9BZE2 481 aaKnown RBP20.32■□□□□ 0.84
PTPA-223ENST00000452489 PPP1R12CQ9BZL4 782 aa20.32■□□□□ 0.84
PTPA-223ENST00000452489 ETNK1Q9HBU6 452 aa20.32■□□□□ 0.84
PTPA-223ENST00000452489 GALNT8Q9NY28 637 aa20.32■□□□□ 0.84
PTPA-223ENST00000452489 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.32■□□□□ 0.84
PTPA-223ENST00000452489 TTI1O43156 1089 aa20.32■□□□□ 0.84
PTPA-223ENST00000452489 ITGA4P13612 1032 aa20.32■□□□□ 0.84
PTPA-223ENST00000452489 KRT2P35908 639 aa20.32■□□□□ 0.84
PTPA-223ENST00000452489 PTDSS1P48651 473 aaKnown RBP20.32■□□□□ 0.84
PTPA-223ENST00000452489 ANKRD13DQ6ZTN6 518 aa20.32■□□□□ 0.84
PTPA-223ENST00000452489 OSCARQ8IYS5 282 aa20.32■□□□□ 0.84
PTPA-223ENST00000452489 SUPT20HQ8NEM7 779 aa20.32■□□□□ 0.84
PTPA-223ENST00000452489 FAM136AQ96C01 138 aa20.32■□□□□ 0.84
PTPA-223ENST00000452489 RMDN2Q96LZ7 410 aa20.32■□□□□ 0.84
PTPA-223ENST00000452489 VCXQ9H320 206 aa20.32■□□□□ 0.84
PTPA-223ENST00000452489 EPB41L4BQ9H329 900 aa20.32■□□□□ 0.84
PTPA-223ENST00000452489 CCDC134Q9H6E4 229 aa20.32■□□□□ 0.84
PTPA-223ENST00000452489 KLRC4O43908 158 aa20.31■□□□□ 0.84
PTPA-223ENST00000452489 IL15P40933 162 aaPredicted RBP20.31■□□□□ 0.84
PTPA-223ENST00000452489 NAB2Q15742 525 aa20.31■□□□□ 0.84
PTPA-223ENST00000452489 NGDNQ8NEJ9 315 aaKnown RBP20.31■□□□□ 0.84
PTPA-223ENST00000452489 TAF4BQ92750 862 aa20.31■□□□□ 0.84
PTPA-223ENST00000452489 OPTNQ96CV9 577 aa20.31■□□□□ 0.84
PTPA-223ENST00000452489 TRAPPC9Q96Q05 1148 aa20.31■□□□□ 0.84
PTPA-223ENST00000452489 CYP39A1Q9NYL5 469 aa20.31■□□□□ 0.84
PTPA-223ENST00000452489 SUN1O94901 812 aa20.31■□□□□ 0.84
PTPA-223ENST00000452489 FOXO4P98177 505 aa20.31■□□□□ 0.84
PTPA-223ENST00000452489 CMPK2Q5EBM0 449 aa20.31■□□□□ 0.84
PTPA-223ENST00000452489 HGSNATQ68CP4 663 aa20.31■□□□□ 0.84
PTPA-223ENST00000452489 ASAP3Q8TDY4 903 aa20.31■□□□□ 0.84
PTPA-223ENST00000452489 BAP1Q92560 729 aa20.31■□□□□ 0.84
PTPA-223ENST00000452489 PLIN2Q99541 437 aa20.31■□□□□ 0.84
PTPA-223ENST00000452489 PACSIN1Q9BY11 444 aa20.31■□□□□ 0.84
PTPA-223ENST00000452489 DIP2CQ9Y2E4 1556 aa20.31■□□□□ 0.84
PTPA-223ENST00000452489 TCP11X1B4DZS4 312 aa20.3■□□□□ 0.84
PTPA-223ENST00000452489 TULP1O00294 542 aaPredicted RBP20.3■□□□□ 0.84
PTPA-223ENST00000452489 CASP7P55210 303 aa20.3■□□□□ 0.84
PTPA-223ENST00000452489 EIF3BP55884 814 aaKnown RBP20.3■□□□□ 0.84
PTPA-223ENST00000452489 DIXDC1Q155Q3 683 aa20.3■□□□□ 0.84
PTPA-223ENST00000452489 UBAP2Q5T6F2 1119 aaKnown RBP20.3■□□□□ 0.84
PTPA-223ENST00000452489 CCNJLQ8IV13 435 aa20.3■□□□□ 0.84
PTPA-223ENST00000452489 TRIM42Q8IWZ5 723 aa20.3■□□□□ 0.84
PTPA-223ENST00000452489 MGARPQ8TDB4 240 aa20.3■□□□□ 0.84
PTPA-223ENST00000452489 PIGOQ8TEQ8 1089 aa20.3■□□□□ 0.84
PTPA-223ENST00000452489 NUDCD1Q96RS6 583 aa20.3■□□□□ 0.84
PTPA-223ENST00000452489 CCDC113Q9H0I3 377 aa20.3■□□□□ 0.84
PTPA-223ENST00000452489 DBN1Q16643 649 aa20.3■□□□□ 0.84
PTPA-223ENST00000452489 TSNAXIP1Q2TAA8 658 aa20.3■□□□□ 0.84
PTPA-223ENST00000452489 ANKLE1Q8NAG6 615 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms