RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 DLGAP5Q15398 846 aa13.35□□□□□ -0.27
COL27A1-202ENST00000451716 LRCH2Q5VUJ6 765 aa13.35□□□□□ -0.27
COL27A1-202ENST00000451716 RSBN1LQ6PCB5 846 aaPredicted RBP13.35□□□□□ -0.27
COL27A1-202ENST00000451716 TMCO3Q6UWJ1 677 aa13.35□□□□□ -0.27
COL27A1-202ENST00000451716 SRGAP1Q7Z6B7 1085 aa13.35□□□□□ -0.27
COL27A1-202ENST00000451716 MBOAT7Q96N66 472 aa13.35□□□□□ -0.27
COL27A1-202ENST00000451716 TSG101Q99816 390 aa13.35□□□□□ -0.27
COL27A1-202ENST00000451716 CRACR2AQ9BSW2 395 aa13.35□□□□□ -0.27
COL27A1-202ENST00000451716 STK32BQ9NY57 414 aa13.35□□□□□ -0.27
COL27A1-202ENST00000451716 ZNF70Q9UC06 446 aaPredicted RBP13.35□□□□□ -0.27
COL27A1-202ENST00000451716 ZNF263O14978 683 aa13.35□□□□□ -0.27
COL27A1-202ENST00000451716 MSH4O15457 936 aa13.35□□□□□ -0.27
COL27A1-202ENST00000451716 SPATA31C1P0DKV0 1188 aa13.35□□□□□ -0.27
COL27A1-202ENST00000451716 STAT2P52630 851 aa13.35□□□□□ -0.27
COL27A1-202ENST00000451716 SLC12A3P55017 1021 aa13.35□□□□□ -0.27
COL27A1-202ENST00000451716 RRAGAQ7L523 313 aa13.35□□□□□ -0.27
COL27A1-202ENST00000451716 C10orf67Q8IYJ2 551 aa13.35□□□□□ -0.27
COL27A1-202ENST00000451716 SLFN12Q8IYM2 578 aa13.35□□□□□ -0.27
COL27A1-202ENST00000451716 RETREG2Q8NC44 543 aa13.35□□□□□ -0.27
COL27A1-202ENST00000451716 SCFD1Q8WVM8 642 aa13.35□□□□□ -0.27
COL27A1-202ENST00000451716 NAP1L4Q99733 375 aaKnown RBP13.35□□□□□ -0.27
COL27A1-202ENST00000451716 GLIS2Q9BZE0 524 aaPredicted RBP13.35□□□□□ -0.27
COL27A1-202ENST00000451716 RGL1Q9NZL6 768 aa13.35□□□□□ -0.27
COL27A1-202ENST00000451716 PCDHA2Q9Y5H9 948 aa13.35□□□□□ -0.27
COL27A1-202ENST00000451716 MACROD2A1Z1Q3 448 aa13.34□□□□□ -0.27
COL27A1-202ENST00000451716 SRGAP2O75044 1071 aa13.34□□□□□ -0.27
COL27A1-202ENST00000451716 SREBF1P36956 1147 aa13.34□□□□□ -0.27
COL27A1-202ENST00000451716 CCDC40Q4G0X9 1142 aa13.34□□□□□ -0.27
COL27A1-202ENST00000451716 ZCWPW2Q504Y3 356 aa13.34□□□□□ -0.27
COL27A1-202ENST00000451716 CCDC65Q8IXS2 484 aa13.34□□□□□ -0.27
COL27A1-202ENST00000451716 GPR161Q8N6U8 529 aaKnown RBP13.34□□□□□ -0.27
COL27A1-202ENST00000451716 JAKMIP2Q96AA8 810 aa13.34□□□□□ -0.27
COL27A1-202ENST00000451716 ARGLU1Q9NWB6 273 aaPredicted RBP13.34□□□□□ -0.27
COL27A1-202ENST00000451716 EML1O00423 815 aa13.34□□□□□ -0.27
COL27A1-202ENST00000451716 PNMA6AP0CW24 399 aaPredicted RBP13.34□□□□□ -0.27
COL27A1-202ENST00000451716 FKBP3Q00688 224 aaKnown RBP13.34□□□□□ -0.27
COL27A1-202ENST00000451716 KRT222Q8N1A0 295 aa13.34□□□□□ -0.27
COL27A1-202ENST00000451716 OGFOD1Q8N543 542 aa13.34□□□□□ -0.27
COL27A1-202ENST00000451716 TTLL6Q8N841 843 aa13.34□□□□□ -0.27
COL27A1-202ENST00000451716 SUPT20HQ8NEM7 779 aa13.34□□□□□ -0.27
COL27A1-202ENST00000451716 MED4Q9NPJ6 270 aa13.34□□□□□ -0.27
COL27A1-202ENST00000451716 NLRC4Q9NPP4 1024 aa13.34□□□□□ -0.27
COL27A1-202ENST00000451716 EMILIN3Q9NT22 766 aa13.34□□□□□ -0.27
COL27A1-202ENST00000451716 FBXO28Q9NVF7 368 aa13.34□□□□□ -0.27
COL27A1-202ENST00000451716 ARHGAP20Q9P2F6 1191 aa13.34□□□□□ -0.27
COL27A1-202ENST00000451716 LRRC53A6NM62 1247 aa13.34□□□□□ -0.27
COL27A1-202ENST00000451716 RSPH10B2B2RC85 870 aa13.34□□□□□ -0.27
COL27A1-202ENST00000451716 CHMP2AO43633 222 aa13.34□□□□□ -0.27
COL27A1-202ENST00000451716 FGFR1OPO95684 399 aaKnown RBP13.34□□□□□ -0.27
COL27A1-202ENST00000451716 ATP1A1P05023 1023 aaKnown RBP13.34□□□□□ -0.27
COL27A1-202ENST00000451716 RHOXF2BP0C7M4 288 aa13.34□□□□□ -0.27
COL27A1-202ENST00000451716 RSPH10BP0C881 870 aa13.34□□□□□ -0.27
COL27A1-202ENST00000451716 CYLC1P35663 651 aaPredicted RBP13.34□□□□□ -0.27
COL27A1-202ENST00000451716 RABGGTAQ92696 567 aa13.34□□□□□ -0.27
COL27A1-202ENST00000451716 CCDC42Q96M95 316 aa13.34□□□□□ -0.27
COL27A1-202ENST00000451716 CAMKK2Q96RR4 588 aa13.34□□□□□ -0.27
COL27A1-202ENST00000451716 RHOXF2Q9BQY4 288 aa13.34□□□□□ -0.27
COL27A1-202ENST00000451716 HAUS4Q9H6D7 363 aa13.34□□□□□ -0.27
COL27A1-202ENST00000451716 COL4A3BPQ9Y5P4 624 aa13.34□□□□□ -0.27
COL27A1-202ENST00000451716 ZRANB2O95218 330 aaKnown RBP eCLIP13.33□□□□□ -0.28
COL27A1-202ENST00000451716 Q4G0T1 1027 aa13.33□□□□□ -0.28
COL27A1-202ENST00000451716 HAUS3Q68CZ6 603 aa13.33□□□□□ -0.28
COL27A1-202ENST00000451716 BTNL9Q6UXG8 535 aa13.33□□□□□ -0.28
COL27A1-202ENST00000451716 ARHGEF10LQ9HCE6 1279 aa13.33□□□□□ -0.28
COL27A1-202ENST00000451716 ZBTB21Q9ULJ3 1066 aa13.33□□□□□ -0.28
COL27A1-202ENST00000451716 MYO6Q9UM54 1294 aa13.33□□□□□ -0.28
COL27A1-202ENST00000451716 DNM3Q9UQ16 869 aa13.33□□□□□ -0.28
COL27A1-202ENST00000451716 JRKLQ9Y4A0 524 aa13.33□□□□□ -0.28
COL27A1-202ENST00000451716 COL4A5P29400 1685 aa13.33□□□□□ -0.28
COL27A1-202ENST00000451716 SHTN1A0MZ66 631 aa13.33□□□□□ -0.28
COL27A1-202ENST00000451716 SFI1A8K8P3 1242 aa13.33□□□□□ -0.28
COL27A1-202ENST00000451716 ZBTB39O15060 712 aa13.33□□□□□ -0.28
COL27A1-202ENST00000451716 IPO7O95373 1038 aaKnown RBP13.33□□□□□ -0.28
COL27A1-202ENST00000451716 KRT83P78385 493 aa13.33□□□□□ -0.28
COL27A1-202ENST00000451716 KCNMA1Q12791 1236 aa13.33□□□□□ -0.28
COL27A1-202ENST00000451716 PIGOQ8TEQ8 1089 aa13.33□□□□□ -0.28
COL27A1-202ENST00000451716 REEP2Q9BRK0 252 aa13.33□□□□□ -0.28
COL27A1-202ENST00000451716 BHMT2Q9H2M3 363 aa13.33□□□□□ -0.28
COL27A1-202ENST00000451716 HERC5Q9UII4 1024 aaKnown RBP13.33□□□□□ -0.28
COL27A1-202ENST00000451716 PLAGL2Q9UPG8 496 aa13.33□□□□□ -0.28
COL27A1-202ENST00000451716 CNTNAP1P78357 1384 aa13.32□□□□□ -0.28
COL27A1-202ENST00000451716 A0A1W2PQJ5 194 aa13.32□□□□□ -0.28
COL27A1-202ENST00000451716 TRIM66O15016 1216 aa13.32□□□□□ -0.28
COL27A1-202ENST00000451716 MAFGO15525 162 aa13.32□□□□□ -0.28
COL27A1-202ENST00000451716 FOSP01100 380 aaPredicted RBP13.32□□□□□ -0.28
COL27A1-202ENST00000451716 DPEP1P16444 411 aa13.32□□□□□ -0.28
COL27A1-202ENST00000451716 RPA1P27694 616 aa13.32□□□□□ -0.28
COL27A1-202ENST00000451716 EIF4A3P38919 411 aaKnown RBP13.32□□□□□ -0.28
COL27A1-202ENST00000451716 AMPD2Q01433 879 aa13.32□□□□□ -0.28
COL27A1-202ENST00000451716 GIT2Q14161 759 aa13.32□□□□□ -0.28
COL27A1-202ENST00000451716 CTTNQ14247 550 aaKnown RBP13.32□□□□□ -0.28
COL27A1-202ENST00000451716 BMS1Q14692 1282 aaKnown RBP13.32□□□□□ -0.28
COL27A1-202ENST00000451716 ZKSCAN8Q15776 578 aaPredicted RBP13.32□□□□□ -0.28
COL27A1-202ENST00000451716 FIGNQ5HY92 759 aa13.32□□□□□ -0.28
COL27A1-202ENST00000451716 CC2D1AQ6P1N0 951 aaPredicted RBP13.32□□□□□ -0.28
COL27A1-202ENST00000451716 MOXD1Q6UVY6 613 aa13.32□□□□□ -0.28
COL27A1-202ENST00000451716 SFR1Q86XK3 245 aa13.32□□□□□ -0.28
COL27A1-202ENST00000451716 CEP112Q8N8E3 955 aa13.32□□□□□ -0.28
COL27A1-202ENST00000451716 NOA1Q8NC60 698 aaKnown RBP13.32□□□□□ -0.28
COL27A1-202ENST00000451716 CAPZA3Q96KX2 299 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms