RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 IFT43Q96FT9 208 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 FAM163AQ96GL9 167 aaPredicted RBP9.42□□□□□ -0.9
LSM5-208ENST00000450169 PBKQ96KB5 322 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 UBAC1Q9BSL1 405 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 MAGEC2Q9UBF1 373 aaPredicted RBP9.42□□□□□ -0.9
LSM5-208ENST00000450169 SALL4Q9UJQ4 1053 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 PNMA2Q9UL42 364 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 PIK3C2AO00443 1686 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 MYH10P35580 1976 aa9.41□□□□□ -0.9
LSM5-208ENST00000450169 TRIM49BA6NDI0 452 aa9.41□□□□□ -0.9
LSM5-208ENST00000450169 GOLGA8AA7E2F4 631 aa9.41□□□□□ -0.9
LSM5-208ENST00000450169 ZNF213O14771 459 aa9.41□□□□□ -0.9
LSM5-208ENST00000450169 ATP6V1G1O75348 118 aa9.41□□□□□ -0.9
LSM5-208ENST00000450169 ACADSP16219 412 aa9.41□□□□□ -0.9
LSM5-208ENST00000450169 PLCG2P16885 1265 aa9.41□□□□□ -0.9
LSM5-208ENST00000450169 PRCPP42785 496 aa9.41□□□□□ -0.9
LSM5-208ENST00000450169 RFX5P48382 616 aaPredicted RBP9.41□□□□□ -0.9
LSM5-208ENST00000450169 DNA2P51530 1060 aa9.41□□□□□ -0.9
LSM5-208ENST00000450169 PABPC1LQ4VXU2 614 aaKnown RBP9.41□□□□□ -0.9
LSM5-208ENST00000450169 CCDC178Q5BJE1 867 aa9.41□□□□□ -0.9
LSM5-208ENST00000450169 OR52E8Q6IFG1 317 aa9.41□□□□□ -0.9
LSM5-208ENST00000450169 ASRGL1Q7L266 308 aa9.41□□□□□ -0.9
LSM5-208ENST00000450169 ANKRD13CQ8N6S4 541 aa9.41□□□□□ -0.9
LSM5-208ENST00000450169 USHBP1Q8N6Y0 703 aa9.41□□□□□ -0.9
LSM5-208ENST00000450169 CABLES1Q8TDN4 633 aa9.41□□□□□ -0.9
LSM5-208ENST00000450169 MTMR8Q96EF0 704 aa9.41□□□□□ -0.9
LSM5-208ENST00000450169 DMAP1Q9NPF5 467 aaPredicted RBP9.41□□□□□ -0.9
LSM5-208ENST00000450169 PICK1Q9NRD5 415 aa9.41□□□□□ -0.9
LSM5-208ENST00000450169 RMND1Q9NWS8 449 aa9.41□□□□□ -0.9
LSM5-208ENST00000450169 NKX1-2Q9UD57 310 aaPredicted RBP9.41□□□□□ -0.9
LSM5-208ENST00000450169 GGT7Q9UJ14 662 aa9.41□□□□□ -0.9
LSM5-208ENST00000450169 ZMYND8Q9ULU4 1186 aaPredicted RBP9.41□□□□□ -0.9
LSM5-208ENST00000450169 KDM3BQ7LBC6 1761 aa9.41□□□□□ -0.9
LSM5-208ENST00000450169 A0A1W2PQJ5 194 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 BUB1O43683 1085 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 AKR1B10O60218 316 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 LCA5LO95447 670 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 DDX58O95786 925 aaKnown RBP9.4□□□□□ -0.9
LSM5-208ENST00000450169 BAG3O95817 575 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 RAD23BP54727 409 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 ENOX2Q16206 610 aaKnown RBP9.4□□□□□ -0.9
LSM5-208ENST00000450169 TSNAXIP1Q2TAA8 658 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 RSBN1LQ6PCB5 846 aaPredicted RBP9.4□□□□□ -0.9
LSM5-208ENST00000450169 C2CD5Q86YS7 1000 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 INPP4AQ96PE3 977 aaPredicted RBP9.4□□□□□ -0.9
LSM5-208ENST00000450169 SELENOSQ9BQE4 189 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 RNPEPL1Q9HAU8 725 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 ARHGAP20Q9P2F6 1191 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 GDAQ9Y2T3 454 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 CD2APQ9Y5K6 639 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 IVNS1ABPQ9Y6Y0 642 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 SOS2Q07890 1332 aaPredicted RBP9.4□□□□□ -0.9
LSM5-208ENST00000450169 MARF1Q9Y4F3 1742 aaKnown RBP9.4□□□□□ -0.9
LSM5-208ENST00000450169 PJA2O43164 708 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 SNX3O60493 162 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 SHBGP04278 402 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 IGKV5-2P06315 115 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 GSTA2P09210 222 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 USP17L8P0C7I0 530 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 CALB2P22676 271 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 HNRNPH3P31942 346 aaKnown RBP9.4□□□□□ -0.9
LSM5-208ENST00000450169 EIF4A3P38919 411 aaKnown RBP9.4□□□□□ -0.9
LSM5-208ENST00000450169 MAGEA1P43355 309 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 CD151P48509 253 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 PLS1Q14651 629 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 FIGNQ5HY92 759 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 TMC3Q7Z5M5 1100 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 LCA5Q86VQ0 697 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 DDX42Q86XP3 938 aaKnown RBP eCLIP9.4□□□□□ -0.9
LSM5-208ENST00000450169 RNF10Q8N5U6 811 aaKnown RBP9.4□□□□□ -0.9
LSM5-208ENST00000450169 USP38Q8NB14 1042 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 DYDC1Q8WWB3 177 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 LPIN2Q92539 896 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 NEUROD6Q96NK8 337 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 NDNQ99608 321 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 TUBGCP2Q9BSJ2 902 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 MYL10Q9BUA6 226 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 NEUROG2Q9H2A3 272 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 CCDC134Q9H6E4 229 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 CABP5Q9NP86 173 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 GALNT8Q9NY28 637 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 ATXN10Q9UBB4 475 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 PLAGL2Q9UPG8 496 aa9.4□□□□□ -0.9
LSM5-208ENST00000450169 MYH7BA7E2Y1 1941 aa9.4□□□□□ -0.91
LSM5-208ENST00000450169 PARP4Q9UKK3 1724 aaKnown RBP9.39□□□□□ -0.91
LSM5-208ENST00000450169 TRIM75PA6NK02 468 aa9.39□□□□□ -0.91
LSM5-208ENST00000450169 F8VZ95 297 aa9.39□□□□□ -0.91
LSM5-208ENST00000450169 ATMINO43313 823 aaPredicted RBP9.39□□□□□ -0.91
LSM5-208ENST00000450169 OAS1P00973 400 aaKnown RBP9.39□□□□□ -0.91
LSM5-208ENST00000450169 GUCY1A2P33402 732 aa9.39□□□□□ -0.91
LSM5-208ENST00000450169 FLT3P36888 993 aa9.39□□□□□ -0.91
LSM5-208ENST00000450169 MAGEA10P43363 369 aaPredicted RBP9.39□□□□□ -0.91
LSM5-208ENST00000450169 MMP13P45452 471 aa9.39□□□□□ -0.91
LSM5-208ENST00000450169 PEX5P50542 639 aa9.39□□□□□ -0.91
LSM5-208ENST00000450169 PDE6CP51160 858 aa9.39□□□□□ -0.91
LSM5-208ENST00000450169 EIF3BP55884 814 aaKnown RBP9.39□□□□□ -0.91
LSM5-208ENST00000450169 RNASE9P60153 205 aaKnown RBP9.39□□□□□ -0.91
LSM5-208ENST00000450169 ZC3H6P61129 1189 aaKnown RBP9.39□□□□□ -0.91
LSM5-208ENST00000450169 FOXB2Q5VYV0 432 aa9.39□□□□□ -0.91
LSM5-208ENST00000450169 CYB5R4Q7L1T6 521 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms