RNA–Protein interactions for RNA: ENST00000450102.6

SCN5A-208, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 6,284 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-208ENST00000450102 TRIM55Q9BYV6 548 aa11.68□□□□□ -0.54
SCN5A-208ENST00000450102 SARS2Q9NP81 518 aaKnown RBP11.68□□□□□ -0.54
SCN5A-208ENST00000450102 SCOCQ9UIL1 159 aa11.68□□□□□ -0.54
SCN5A-208ENST00000450102 ANGPTL2Q9UKU9 493 aa11.68□□□□□ -0.54
SCN5A-208ENST00000450102 TIAM1Q13009 1591 aa11.68□□□□□ -0.54
SCN5A-208ENST00000450102 FANCAO15360 1455 aa11.68□□□□□ -0.54
SCN5A-208ENST00000450102 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.68□□□□□ -0.54
SCN5A-208ENST00000450102 ABCD1P33897 745 aa11.68□□□□□ -0.54
SCN5A-208ENST00000450102 PTGDRQ13258 359 aa11.68□□□□□ -0.54
SCN5A-208ENST00000450102 FAM133BQ5BKY9 247 aaKnown RBP11.68□□□□□ -0.54
SCN5A-208ENST00000450102 TCP11Q8WWU5 503 aa11.68□□□□□ -0.54
SCN5A-208ENST00000450102 OTULINQ96BN8 352 aa11.68□□□□□ -0.54
SCN5A-208ENST00000450102 CDHR1Q96JP9 859 aa11.68□□□□□ -0.54
SCN5A-208ENST00000450102 LRRC37BQ96QE4 947 aa11.68□□□□□ -0.54
SCN5A-208ENST00000450102 MED4Q9NPJ6 270 aa11.68□□□□□ -0.54
SCN5A-208ENST00000450102 FGFR1OP2Q9NVK5 253 aa11.68□□□□□ -0.54
SCN5A-208ENST00000450102 HMGXB3Q12766 1538 aa11.68□□□□□ -0.54
SCN5A-208ENST00000450102 CCT5P48643 541 aa11.68□□□□□ -0.54
SCN5A-208ENST00000450102 MAP3K7CLP57077 242 aa11.68□□□□□ -0.54
SCN5A-208ENST00000450102 BZW1Q7L1Q6 419 aaKnown RBP11.68□□□□□ -0.54
SCN5A-208ENST00000450102 YIPF2Q9BWQ6 316 aa11.68□□□□□ -0.54
SCN5A-208ENST00000450102 TMEM206Q9H813 350 aa11.68□□□□□ -0.54
SCN5A-208ENST00000450102 ZWILCHQ9H900 591 aa11.68□□□□□ -0.54
SCN5A-208ENST00000450102 PPEF1O14829 653 aaPredicted RBP11.68□□□□□ -0.54
SCN5A-208ENST00000450102 COBLO75128 1261 aa11.68□□□□□ -0.54
SCN5A-208ENST00000450102 ACCSLQ4AC99 568 aa11.68□□□□□ -0.54
SCN5A-208ENST00000450102 SPATA1Q5VX52 437 aa11.68□□□□□ -0.54
SCN5A-208ENST00000450102 FAM49AQ9H0Q0 323 aaPredicted RBP11.68□□□□□ -0.54
SCN5A-208ENST00000450102 GINM1Q9NU53 330 aa11.68□□□□□ -0.54
SCN5A-208ENST00000450102 DONSONQ9NYP3 566 aa11.68□□□□□ -0.54
SCN5A-208ENST00000450102 WARS2Q9UGM6 360 aaKnown RBP11.68□□□□□ -0.54
SCN5A-208ENST00000450102 ABCC1P33527 1531 aa11.68□□□□□ -0.54
SCN5A-208ENST00000450102 PI4K2BG5E9Z4 385 aa11.68□□□□□ -0.54
SCN5A-208ENST00000450102 BRD1O95696 1058 aa11.68□□□□□ -0.54
SCN5A-208ENST00000450102 RLBP1P12271 317 aa11.68□□□□□ -0.54
SCN5A-208ENST00000450102 PSMD2Q13200 908 aa11.68□□□□□ -0.54
SCN5A-208ENST00000450102 RRM2BQ7LG56 351 aa11.68□□□□□ -0.54
SCN5A-208ENST00000450102 NLRP4Q96MN2 994 aa11.68□□□□□ -0.54
SCN5A-208ENST00000450102 FSD1LQ9BXM9 530 aa11.68□□□□□ -0.54
SCN5A-208ENST00000450102 WDR11Q9BZH6 1224 aa11.68□□□□□ -0.54
SCN5A-208ENST00000450102 PRDM5Q9NQX1 630 aaPredicted RBP11.68□□□□□ -0.54
SCN5A-208ENST00000450102 CLCA2Q9UQC9 943 aa11.68□□□□□ -0.54
SCN5A-208ENST00000450102 TRPM2O94759 1503 aa11.67□□□□□ -0.54
SCN5A-208ENST00000450102 ESRRAP11474 423 aaPredicted RBP11.67□□□□□ -0.54
SCN5A-208ENST00000450102 SKOR1P84550 965 aa11.67□□□□□ -0.54
SCN5A-208ENST00000450102 ANO4Q32M45 955 aa11.67□□□□□ -0.54
SCN5A-208ENST00000450102 GRAMD1BQ3KR37 738 aa11.67□□□□□ -0.54
SCN5A-208ENST00000450102 SCN4BQ8IWT1 228 aa11.67□□□□□ -0.54
SCN5A-208ENST00000450102 LGR6Q9HBX8 967 aa11.67□□□□□ -0.54
SCN5A-208ENST00000450102 EXOC1LA0A1B0GW35 172 aa11.67□□□□□ -0.54
SCN5A-208ENST00000450102 ARHGEF9O43307 516 aa11.67□□□□□ -0.54
SCN5A-208ENST00000450102 SLCO1A2P46721 670 aa11.67□□□□□ -0.54
SCN5A-208ENST00000450102 COPB1P53618 953 aaKnown RBP11.67□□□□□ -0.54
SCN5A-208ENST00000450102 CACNB1Q02641 598 aaPredicted RBP11.67□□□□□ -0.54
SCN5A-208ENST00000450102 OCA2Q04671 838 aa11.67□□□□□ -0.54
SCN5A-208ENST00000450102 C10orf76Q5T2E6 689 aa11.67□□□□□ -0.54
SCN5A-208ENST00000450102 OR9Q1Q8NGQ5 310 aa11.67□□□□□ -0.54
SCN5A-208ENST00000450102 MAN1A2O60476 641 aa11.67□□□□□ -0.54
SCN5A-208ENST00000450102 MCF2P10911 925 aa11.67□□□□□ -0.54
SCN5A-208ENST00000450102 SURF1Q15526 300 aa11.67□□□□□ -0.54
SCN5A-208ENST00000450102 BTN2A2Q8WVV5 523 aa11.67□□□□□ -0.54
SCN5A-208ENST00000450102 LARP4BQ92615 738 aaKnown RBP11.67□□□□□ -0.54
SCN5A-208ENST00000450102 PBXIP1Q96AQ6 731 aa11.67□□□□□ -0.54
SCN5A-208ENST00000450102 CLIC6Q96NY7 704 aa11.67□□□□□ -0.54
SCN5A-208ENST00000450102 TUBGCP2Q9BSJ2 902 aa11.67□□□□□ -0.54
SCN5A-208ENST00000450102 ING2Q9H160 280 aa11.67□□□□□ -0.54
SCN5A-208ENST00000450102 EPB41L5Q9HCM4 733 aa11.67□□□□□ -0.54
SCN5A-208ENST00000450102 MAP3K19Q56UN5 1328 aa11.67□□□□□ -0.54
SCN5A-208ENST00000450102 IQANK1A0A1B0GTG1 560 aa11.67□□□□□ -0.54
SCN5A-208ENST00000450102 PRPF4O43172 522 aaKnown RBP eCLIP11.67□□□□□ -0.54
SCN5A-208ENST00000450102 GFPT2O94808 682 aa11.67□□□□□ -0.54
SCN5A-208ENST00000450102 MYL1P05976 194 aa11.67□□□□□ -0.54
SCN5A-208ENST00000450102 PSAPP07602 524 aa11.67□□□□□ -0.54
SCN5A-208ENST00000450102 SLC10A4Q96EP9 437 aa11.67□□□□□ -0.54
SCN5A-208ENST00000450102 ZNF274Q96GC6 653 aaPredicted RBP11.67□□□□□ -0.54
SCN5A-208ENST00000450102 FANCLQ9NW38 375 aa11.67□□□□□ -0.54
SCN5A-208ENST00000450102 IREB2P48200 963 aaKnown RBP11.67□□□□□ -0.54
SCN5A-208ENST00000450102 E2F5Q15329 346 aa11.67□□□□□ -0.54
SCN5A-208ENST00000450102 TADA2BQ86TJ2 420 aa11.67□□□□□ -0.54
SCN5A-208ENST00000450102 FAF2Q96CS3 445 aa11.67□□□□□ -0.54
SCN5A-208ENST00000450102 CCDC17Q96LX7 622 aa11.67□□□□□ -0.54
SCN5A-208ENST00000450102 CASS4Q9NQ75 786 aa11.67□□□□□ -0.54
SCN5A-208ENST00000450102 AFF4Q9UHB7 1163 aaKnown RBP11.67□□□□□ -0.54
SCN5A-208ENST00000450102 E5RI56 91 aa11.66□□□□□ -0.54
SCN5A-208ENST00000450102 MEIS1O00470 390 aa11.66□□□□□ -0.54
SCN5A-208ENST00000450102 POLE2P56282 527 aa11.66□□□□□ -0.54
SCN5A-208ENST00000450102 THEMIS2Q5TEJ8 643 aa11.66□□□□□ -0.54
SCN5A-208ENST00000450102 PYROXD1Q8WU10 500 aa11.66□□□□□ -0.54
SCN5A-208ENST00000450102 TSR3Q9UJK0 312 aaKnown RBP11.66□□□□□ -0.54
SCN5A-208ENST00000450102 GDF11O95390 407 aa11.66□□□□□ -0.54
SCN5A-208ENST00000450102 LRRC41Q15345 812 aa11.66□□□□□ -0.54
SCN5A-208ENST00000450102 ASPRV1Q53RT3 343 aa11.66□□□□□ -0.54
SCN5A-208ENST00000450102 PDXDC2PQ6P474 469 aa11.66□□□□□ -0.54
SCN5A-208ENST00000450102 STX19Q8N4C7 294 aa11.66□□□□□ -0.54
SCN5A-208ENST00000450102 HIPK4Q8NE63 616 aa11.66□□□□□ -0.54
SCN5A-208ENST00000450102 ASIC4Q96FT7 647 aa11.66□□□□□ -0.54
SCN5A-208ENST00000450102 CYTH2Q99418 400 aa11.66□□□□□ -0.54
SCN5A-208ENST00000450102 SNX5Q9Y5X3 404 aa11.66□□□□□ -0.54
SCN5A-208ENST00000450102 ZBTB7BO15156 539 aaPredicted RBP11.66□□□□□ -0.54
SCN5A-208ENST00000450102 TRIM60Q495X7 471 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms