RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 GPNMBQ14956 572 aa25.08■■□□□ 1.61
CPSF7-208ENST00000450000 RSPH3Q86UC2 560 aa25.08■■□□□ 1.61
CPSF7-208ENST00000450000 CCDC12Q8WUD4 166 aaPredicted RBP25.08■■□□□ 1.61
CPSF7-208ENST00000450000 SEPT8Q92599 483 aa25.08■■□□□ 1.61
CPSF7-208ENST00000450000 MXRA8Q9BRK3 442 aa25.08■■□□□ 1.61
CPSF7-208ENST00000450000 COL25A1Q9BXS0 654 aaPredicted RBP25.08■■□□□ 1.61
CPSF7-208ENST00000450000 SMARCAD1Q9H4L7 1026 aa25.08■■□□□ 1.61
CPSF7-208ENST00000450000 JPH1Q9HDC5 661 aaPredicted RBP25.08■■□□□ 1.61
CPSF7-208ENST00000450000 SNX14Q9Y5W7 946 aa25.08■■□□□ 1.61
CPSF7-208ENST00000450000 SCN5AQ14524 2016 aa25.08■■□□□ 1.61
CPSF7-208ENST00000450000 STXBP3O00186 592 aa25.07■■□□□ 1.6
CPSF7-208ENST00000450000 AMHP03971 560 aa25.07■■□□□ 1.6
CPSF7-208ENST00000450000 MARK3P27448 753 aa25.07■■□□□ 1.6
CPSF7-208ENST00000450000 CDC27P30260 824 aa25.07■■□□□ 1.6
CPSF7-208ENST00000450000 ADD1P35611 737 aaKnown RBP25.07■■□□□ 1.6
CPSF7-208ENST00000450000 PPFIA1Q13136 1202 aa25.07■■□□□ 1.6
CPSF7-208ENST00000450000 USP38Q8NB14 1042 aa25.07■■□□□ 1.6
CPSF7-208ENST00000450000 IL27Q8NEV9 243 aa25.07■■□□□ 1.6
CPSF7-208ENST00000450000 PGBD1Q96JS3 809 aa25.07■■□□□ 1.6
CPSF7-208ENST00000450000 ANO3Q9BYT9 981 aa25.07■■□□□ 1.6
CPSF7-208ENST00000450000 TANC1Q9C0D5 1861 aa25.06■■□□□ 1.6
CPSF7-208ENST00000450000 DEFB103AP81534 67 aa25.06■■□□□ 1.6
CPSF7-208ENST00000450000 SKIV2LQ15477 1246 aaKnown RBP25.06■■□□□ 1.6
CPSF7-208ENST00000450000 FAM117BQ6P1L5 589 aa25.06■■□□□ 1.6
CPSF7-208ENST00000450000 DBF4BQ8NFT6 615 aa25.06■■□□□ 1.6
CPSF7-208ENST00000450000 LMBR1Q8WVP7 490 aa25.06■■□□□ 1.6
CPSF7-208ENST00000450000 RAD9AQ99638 391 aa25.06■■□□□ 1.6
CPSF7-208ENST00000450000 KCNH7Q9NS40 1196 aa25.06■■□□□ 1.6
CPSF7-208ENST00000450000 SLC9A2Q9UBY0 812 aa25.06■■□□□ 1.6
CPSF7-208ENST00000450000 SCG2P13521 617 aa25.05■■□□□ 1.6
CPSF7-208ENST00000450000 RPS6KB1P23443 525 aa25.05■■□□□ 1.6
CPSF7-208ENST00000450000 TAP1Q03518 808 aa25.05■■□□□ 1.6
CPSF7-208ENST00000450000 FUT2Q10981 343 aa25.05■■□□□ 1.6
CPSF7-208ENST00000450000 CEP55Q53EZ4 464 aa25.05■■□□□ 1.6
CPSF7-208ENST00000450000 TAF2Q6P1X5 1199 aa25.05■■□□□ 1.6
CPSF7-208ENST00000450000 TRAF7Q6Q0C0 670 aa25.05■■□□□ 1.6
CPSF7-208ENST00000450000 MYOCDQ8IZQ8 938 aa25.05■■□□□ 1.6
CPSF7-208ENST00000450000 KCNB2Q92953 911 aa25.05■■□□□ 1.6
CPSF7-208ENST00000450000 C6orf50Q9HD87 102 aa25.05■■□□□ 1.6
CPSF7-208ENST00000450000 TELO2Q9Y4R8 837 aa25.05■■□□□ 1.6
CPSF7-208ENST00000450000 GSTTP1A0A1W2PQM5 241 aa25.04■■□□□ 1.6
CPSF7-208ENST00000450000 HOXC8P31273 242 aa25.04■■□□□ 1.6
CPSF7-208ENST00000450000 MBTPS1Q14703 1052 aa25.04■■□□□ 1.6
CPSF7-208ENST00000450000 PFKFB3Q16875 520 aaPredicted RBP25.04■■□□□ 1.6
CPSF7-208ENST00000450000 JAKMIP3Q5VZ66 844 aa25.04■■□□□ 1.6
CPSF7-208ENST00000450000 MCTP2Q6DN12 878 aa25.04■■□□□ 1.6
CPSF7-208ENST00000450000 TYW1BQ6NUM6 668 aa25.04■■□□□ 1.6
CPSF7-208ENST00000450000 TMCO2Q7Z6W1 182 aaPredicted RBP25.04■■□□□ 1.6
CPSF7-208ENST00000450000 FAM217BQ9NTX9 383 aaPredicted RBP25.04■■□□□ 1.6
CPSF7-208ENST00000450000 THEGQ9P2T0 379 aa25.04■■□□□ 1.6
CPSF7-208ENST00000450000 TRIP12Q14669 1992 aaPredicted RBP25.04■■□□□ 1.6
CPSF7-208ENST00000450000 GJB5O95377 273 aa25.03■■□□□ 1.6
CPSF7-208ENST00000450000 IGBP1P78318 339 aa25.03■■□□□ 1.6
CPSF7-208ENST00000450000 GRIK4Q16099 956 aa25.03■■□□□ 1.6
CPSF7-208ENST00000450000 TJAP1Q5JTD0 557 aa25.03■■□□□ 1.6
CPSF7-208ENST00000450000 TMEM260Q9NX78 707 aa25.03■■□□□ 1.6
CPSF7-208ENST00000450000 TRPC6Q9Y210 931 aa25.03■■□□□ 1.6
CPSF7-208ENST00000450000 RFXAPO00287 272 aa25.02■■□□□ 1.6
CPSF7-208ENST00000450000 GNA11P29992 359 aa25.02■■□□□ 1.6
CPSF7-208ENST00000450000 PLEKHG4Q58EX7 1191 aa25.02■■□□□ 1.6
CPSF7-208ENST00000450000 APBB2Q92870 758 aa25.02■■□□□ 1.6
CPSF7-208ENST00000450000 TCEAL9Q9UHQ7 104 aa25.02■■□□□ 1.6
CPSF7-208ENST00000450000 TUBE1Q9UJT0 475 aa25.02■■□□□ 1.6
CPSF7-208ENST00000450000 RRN3P2A6NIE6 340 aa25.01■■□□□ 1.59
CPSF7-208ENST00000450000 SREBF1P36956 1147 aa25.01■■□□□ 1.59
CPSF7-208ENST00000450000 CYP2W1Q8TAV3 490 aa25.01■■□□□ 1.59
CPSF7-208ENST00000450000 BICD2Q8TD16 824 aa25.01■■□□□ 1.59
CPSF7-208ENST00000450000 ATXN2LQ8WWM7 1075 aaKnown RBP25.01■■□□□ 1.59
CPSF7-208ENST00000450000 PRDM6Q9NQX0 595 aa25.01■■□□□ 1.59
CPSF7-208ENST00000450000 INSL6Q9Y581 213 aa25.01■■□□□ 1.59
CPSF7-208ENST00000450000 NFASCO94856 1347 aa25.01■■□□□ 1.59
CPSF7-208ENST00000450000 PRPF3O43395 683 aaKnown RBP25■■□□□ 1.59
CPSF7-208ENST00000450000 RPLP2P05387 115 aaKnown RBP25■■□□□ 1.59
CPSF7-208ENST00000450000 ARP10275 920 aa25■■□□□ 1.59
CPSF7-208ENST00000450000 ACTR2P61160 394 aa25■■□□□ 1.59
CPSF7-208ENST00000450000 TCTN1Q2MV58 587 aa25■■□□□ 1.59
CPSF7-208ENST00000450000 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25■■□□□ 1.59
CPSF7-208ENST00000450000 PLA2G4DQ86XP0 818 aa25■■□□□ 1.59
CPSF7-208ENST00000450000 REXO1Q8N1G1 1221 aaKnown RBP25■■□□□ 1.59
CPSF7-208ENST00000450000 CCDC148Q8NFR7 591 aa25■■□□□ 1.59
CPSF7-208ENST00000450000 IFIH1Q9BYX4 1025 aaKnown RBP25■■□□□ 1.59
CPSF7-208ENST00000450000 AGO4Q9HCK5 861 aaKnown RBP25■■□□□ 1.59
CPSF7-208ENST00000450000 MTUS1Q9ULD2 1270 aa25■■□□□ 1.59
CPSF7-208ENST00000450000 LCHNA4D1U4 455 aa24.99■■□□□ 1.59
CPSF7-208ENST00000450000 M0QZ92 97 aa24.99■■□□□ 1.59
CPSF7-208ENST00000450000 DDX39AO00148 427 aaKnown RBP24.99■■□□□ 1.59
CPSF7-208ENST00000450000 BACH1O14867 736 aa24.99■■□□□ 1.59
CPSF7-208ENST00000450000 EPB41L2O43491 1005 aaKnown RBP24.99■■□□□ 1.59
CPSF7-208ENST00000450000 STAT5BP51692 787 aa24.99■■□□□ 1.59
CPSF7-208ENST00000450000 MRPS5P82675 430 aaKnown RBP24.99■■□□□ 1.59
CPSF7-208ENST00000450000 FBXL16Q8N461 479 aa24.99■■□□□ 1.59
CPSF7-208ENST00000450000 PHKBQ93100 1093 aa24.99■■□□□ 1.59
CPSF7-208ENST00000450000 TGS1Q96RS0 853 aaKnown RBP24.99■■□□□ 1.59
CPSF7-208ENST00000450000 SLC26A6Q9BXS9 759 aa24.99■■□□□ 1.59
CPSF7-208ENST00000450000 CYP46A1Q9Y6A2 500 aa24.99■■□□□ 1.59
CPSF7-208ENST00000450000 ESYT2A0FGR8 921 aa24.98■■□□□ 1.59
CPSF7-208ENST00000450000 MEIS1O00470 390 aa24.98■■□□□ 1.59
CPSF7-208ENST00000450000 UPP2O95045 317 aa24.98■■□□□ 1.59
CPSF7-208ENST00000450000 CLK2P49760 499 aaKnown RBP24.98■■□□□ 1.59
CPSF7-208ENST00000450000 CCT2P78371 535 aaKnown RBP24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms