RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 PKDCCQ504Y2 493 aa9.41□□□□□ -0.9
LINC01961-201ENST00000449954 NAALADL2Q58DX5 795 aa9.41□□□□□ -0.9
LINC01961-201ENST00000449954 TNNI3KQ59H18 835 aa9.41□□□□□ -0.9
LINC01961-201ENST00000449954 GPR161Q8N6U8 529 aaKnown RBP9.41□□□□□ -0.9
LINC01961-201ENST00000449954 SCFD2Q8WU76 684 aa9.41□□□□□ -0.9
LINC01961-201ENST00000449954 SDR42E1Q8WUS8 393 aa9.41□□□□□ -0.9
LINC01961-201ENST00000449954 SEPT8Q92599 483 aa9.41□□□□□ -0.9
LINC01961-201ENST00000449954 P2RX5Q93086 422 aa9.41□□□□□ -0.9
LINC01961-201ENST00000449954 TRERF1Q96PN7 1200 aa9.41□□□□□ -0.9
LINC01961-201ENST00000449954 RTP3Q9BQQ7 232 aa9.41□□□□□ -0.9
LINC01961-201ENST00000449954 SH2B1Q9NRF2 756 aaPredicted RBP9.41□□□□□ -0.9
LINC01961-201ENST00000449954 NYAP2Q9P242 653 aa9.41□□□□□ -0.9
LINC01961-201ENST00000449954 RALYQ9UKM9 306 aaKnown RBP9.41□□□□□ -0.9
LINC01961-201ENST00000449954 DDX49Q9Y6V7 483 aaKnown RBP9.41□□□□□ -0.9
LINC01961-201ENST00000449954 FPGT-TNNI3KV9GXZ4 949 aa9.41□□□□□ -0.9
LINC01961-201ENST00000449954 LCTP09848 1927 aa9.41□□□□□ -0.9
LINC01961-201ENST00000449954 E9PSI1 815 aa9.4□□□□□ -0.9
LINC01961-201ENST00000449954 LCE2BO14633 110 aa9.4□□□□□ -0.9
LINC01961-201ENST00000449954 SRGAP2BP0DMP2 458 aa9.4□□□□□ -0.9
LINC01961-201ENST00000449954 JUNDP17535 347 aa9.4□□□□□ -0.9
LINC01961-201ENST00000449954 NRIP1P48552 1158 aa9.4□□□□□ -0.9
LINC01961-201ENST00000449954 ALDH5A1P51649 535 aaPredicted RBP9.4□□□□□ -0.9
LINC01961-201ENST00000449954 TRIM71Q2Q1W2 868 aaKnown RBP9.4□□□□□ -0.9
LINC01961-201ENST00000449954 CWF19L1Q69YN2 538 aaKnown RBP9.4□□□□□ -0.9
LINC01961-201ENST00000449954 C7orf31Q8N865 590 aa9.4□□□□□ -0.9
LINC01961-201ENST00000449954 DTWD2Q8NBA8 298 aa9.4□□□□□ -0.9
LINC01961-201ENST00000449954 APBB2Q92870 758 aa9.4□□□□□ -0.9
LINC01961-201ENST00000449954 NEK1Q96PY6 1258 aa9.4□□□□□ -0.9
LINC01961-201ENST00000449954 MPHOSPH6Q99547 160 aaKnown RBP9.4□□□□□ -0.9
LINC01961-201ENST00000449954 KATNAL1Q9BW62 490 aa9.4□□□□□ -0.9
LINC01961-201ENST00000449954 ATP8A2Q9NTI2 1148 aa9.4□□□□□ -0.9
LINC01961-201ENST00000449954 PKD2L1Q9P0L9 805 aa9.4□□□□□ -0.9
LINC01961-201ENST00000449954 ZFYVE26Q68DK2 2539 aa9.39□□□□□ -0.91
LINC01961-201ENST00000449954 SPEGQ15772 3267 aa9.39□□□□□ -0.91
LINC01961-201ENST00000449954 FAM187AA6NFU0 413 aa9.39□□□□□ -0.91
LINC01961-201ENST00000449954 PRR5-ARHGAP8B1AHC4 643 aa9.39□□□□□ -0.91
LINC01961-201ENST00000449954 RSPH10B2B2RC85 870 aa9.39□□□□□ -0.91
LINC01961-201ENST00000449954 CSPG5O95196 566 aa9.39□□□□□ -0.91
LINC01961-201ENST00000449954 GNAI3P08754 354 aa9.39□□□□□ -0.91
LINC01961-201ENST00000449954 RSPH10BP0C881 870 aa9.39□□□□□ -0.91
LINC01961-201ENST00000449954 ALAS1P13196 640 aa9.39□□□□□ -0.91
LINC01961-201ENST00000449954 STAT2P52630 851 aa9.39□□□□□ -0.91
LINC01961-201ENST00000449954 ARHGAP8P85298 464 aa9.39□□□□□ -0.91
LINC01961-201ENST00000449954 PDE4BQ07343 736 aa9.39□□□□□ -0.91
LINC01961-201ENST00000449954 CAMK1Q14012 370 aa9.39□□□□□ -0.91
LINC01961-201ENST00000449954 C12orf60Q5U649 245 aa9.39□□□□□ -0.91
LINC01961-201ENST00000449954 ADGRD2Q7Z7M1 963 aa9.39□□□□□ -0.91
LINC01961-201ENST00000449954 FLCNQ8NFG4 579 aa9.39□□□□□ -0.91
LINC01961-201ENST00000449954 SSH1Q8WYL5 1049 aa9.39□□□□□ -0.91
LINC01961-201ENST00000449954 DDRGK1Q96HY6 314 aa9.39□□□□□ -0.91
LINC01961-201ENST00000449954 CDCA3Q99618 268 aaPredicted RBP9.39□□□□□ -0.91
LINC01961-201ENST00000449954 MEIS3Q99687 375 aa9.39□□□□□ -0.91
LINC01961-201ENST00000449954 RTKNQ9BST9 563 aa9.39□□□□□ -0.91
LINC01961-201ENST00000449954 CDV3Q9UKY7 258 aaKnown RBP9.39□□□□□ -0.91
LINC01961-201ENST00000449954 PLAGL2Q9UPG8 496 aa9.39□□□□□ -0.91
LINC01961-201ENST00000449954 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.38□□□□□ -0.91
LINC01961-201ENST00000449954 DGAT1O75907 488 aa9.38□□□□□ -0.91
LINC01961-201ENST00000449954 MMP3P08254 477 aa9.38□□□□□ -0.91
LINC01961-201ENST00000449954 TXNP10599 105 aaKnown RBP9.38□□□□□ -0.91
LINC01961-201ENST00000449954 CASTP20810 708 aaKnown RBP9.38□□□□□ -0.91
LINC01961-201ENST00000449954 ATXN1P54253 815 aaKnown RBP9.38□□□□□ -0.91
LINC01961-201ENST00000449954 LMNB2Q03252 620 aa9.38□□□□□ -0.91
LINC01961-201ENST00000449954 TTF1Q15361 905 aaPredicted RBP9.38□□□□□ -0.91
LINC01961-201ENST00000449954 NSMFQ6X4W1 530 aa9.38□□□□□ -0.91
LINC01961-201ENST00000449954 FAM160B2Q86V87 743 aa9.38□□□□□ -0.91
LINC01961-201ENST00000449954 GMCL1P1Q8NEA9 526 aa9.38□□□□□ -0.91
LINC01961-201ENST00000449954 ATP8B4Q8TF62 1192 aa9.38□□□□□ -0.91
LINC01961-201ENST00000449954 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.38□□□□□ -0.91
LINC01961-201ENST00000449954 RC3H2Q9HBD1 1191 aaKnown RBP9.38□□□□□ -0.91
LINC01961-201ENST00000449954 HDAC6Q9UBN7 1215 aa9.38□□□□□ -0.91
LINC01961-201ENST00000449954 R4GN57 208 aa9.38□□□□□ -0.91
LINC01961-201ENST00000449954 CAND2O75155 1236 aa9.37□□□□□ -0.91
LINC01961-201ENST00000449954 BMP3P12645 472 aa9.37□□□□□ -0.91
LINC01961-201ENST00000449954 BTG3Q14201 252 aaPredicted RBP9.37□□□□□ -0.91
LINC01961-201ENST00000449954 SLC9C2Q5TAH2 1124 aa9.37□□□□□ -0.91
LINC01961-201ENST00000449954 RBM23Q86U06 439 aaKnown RBP9.37□□□□□ -0.91
LINC01961-201ENST00000449954 LCORLQ8N3X6 602 aa9.37□□□□□ -0.91
LINC01961-201ENST00000449954 CHURC1Q8WUH1 139 aa9.37□□□□□ -0.91
LINC01961-201ENST00000449954 KAT2BQ92831 832 aa9.37□□□□□ -0.91
LINC01961-201ENST00000449954 WNT8BQ93098 351 aa9.37□□□□□ -0.91
LINC01961-201ENST00000449954 BORCS6Q96GS4 357 aa9.37□□□□□ -0.91
LINC01961-201ENST00000449954 TLE6Q9H808 572 aa9.37□□□□□ -0.91
LINC01961-201ENST00000449954 SMC4Q9NTJ3 1288 aa9.37□□□□□ -0.91
LINC01961-201ENST00000449954 DBNLQ9UJU6 430 aaKnown RBP9.37□□□□□ -0.91
LINC01961-201ENST00000449954 BAZ2AQ9UIF9 1905 aaKnown RBP9.37□□□□□ -0.91
LINC01961-201ENST00000449954 MYH4Q9Y623 1939 aa9.37□□□□□ -0.91
LINC01961-201ENST00000449954 ZZEF1O43149 2961 aa9.36□□□□□ -0.91
LINC01961-201ENST00000449954 SOBPA7XYQ1 873 aa9.36□□□□□ -0.91
LINC01961-201ENST00000449954 B4DLN1 442 aa9.36□□□□□ -0.91
LINC01961-201ENST00000449954 F2P00734 622 aa9.36□□□□□ -0.91
LINC01961-201ENST00000449954 ITGB1P05556 798 aa9.36□□□□□ -0.91
LINC01961-201ENST00000449954 PDE6AP16499 860 aa9.36□□□□□ -0.91
LINC01961-201ENST00000449954 HOXB8P17481 243 aaPredicted RBP9.36□□□□□ -0.91
LINC01961-201ENST00000449954 EDNRBP24530 442 aa9.36□□□□□ -0.91
LINC01961-201ENST00000449954 THPOP40225 353 aa9.36□□□□□ -0.91
LINC01961-201ENST00000449954 MRPL12P52815 198 aaKnown RBP9.36□□□□□ -0.91
LINC01961-201ENST00000449954 IKQ13123 557 aaPredicted RBP9.36□□□□□ -0.91
LINC01961-201ENST00000449954 DDX10Q13206 875 aaKnown RBP9.36□□□□□ -0.91
LINC01961-201ENST00000449954 DGKDQ16760 1214 aa9.36□□□□□ -0.91
LINC01961-201ENST00000449954 ALDH1L2Q3SY69 923 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms