RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 AGPSO00116 658 aa13.49□□□□□ -0.25
UBE3B-204ENST00000449510 ITGA4P13612 1032 aa13.49□□□□□ -0.25
UBE3B-204ENST00000449510 SLC9A1P19634 815 aa13.49□□□□□ -0.25
UBE3B-204ENST00000449510 UBL4BQ8N7F7 174 aa13.49□□□□□ -0.25
UBE3B-204ENST00000449510 MCUR1Q96AQ8 359 aa13.49□□□□□ -0.25
UBE3B-204ENST00000449510 GCNT4Q9P109 453 aa13.49□□□□□ -0.25
UBE3B-204ENST00000449510 FRMD4BQ9Y2L6 1034 aa13.49□□□□□ -0.25
UBE3B-204ENST00000449510 PIK3C2BO00750 1634 aa13.49□□□□□ -0.25
UBE3B-204ENST00000449510 PXDNLA1KZ92 1463 aa13.49□□□□□ -0.25
UBE3B-204ENST00000449510 MYMKA6NI61 221 aa13.49□□□□□ -0.25
UBE3B-204ENST00000449510 ERVV-2B6SEH9 535 aa13.49□□□□□ -0.25
UBE3B-204ENST00000449510 FOXP2O15409 715 aa13.49□□□□□ -0.25
UBE3B-204ENST00000449510 PLCG2P16885 1265 aa13.49□□□□□ -0.25
UBE3B-204ENST00000449510 HSPA2P54652 639 aa13.49□□□□□ -0.25
UBE3B-204ENST00000449510 PKN1Q16512 942 aa13.49□□□□□ -0.25
UBE3B-204ENST00000449510 KCTD1Q719H9 257 aa13.49□□□□□ -0.25
UBE3B-204ENST00000449510 VPS52Q8N1B4 723 aa13.49□□□□□ -0.25
UBE3B-204ENST00000449510 MMGT1Q8N4V1 131 aa13.49□□□□□ -0.25
UBE3B-204ENST00000449510 RAPGEF5Q92565 580 aa13.49□□□□□ -0.25
UBE3B-204ENST00000449510 NAP1L3Q99457 506 aaPredicted RBP13.49□□□□□ -0.25
UBE3B-204ENST00000449510 DNAJC7Q99615 494 aa13.49□□□□□ -0.25
UBE3B-204ENST00000449510 ISCA1Q9BUE6 129 aa13.49□□□□□ -0.25
UBE3B-204ENST00000449510 RFX7Q2KHR2 1363 aa13.49□□□□□ -0.25
UBE3B-204ENST00000449510 ZNF233A6NK53 670 aa13.48□□□□□ -0.25
UBE3B-204ENST00000449510 BAG2O95816 211 aa13.48□□□□□ -0.25
UBE3B-204ENST00000449510 ALDH3A1P30838 453 aa13.48□□□□□ -0.25
UBE3B-204ENST00000449510 KCNJ1P48048 391 aa13.48□□□□□ -0.25
UBE3B-204ENST00000449510 TROAPQ12815 778 aa13.48□□□□□ -0.25
UBE3B-204ENST00000449510 ZYXQ15942 572 aaKnown RBP13.48□□□□□ -0.25
UBE3B-204ENST00000449510 SYCE1Q8N0S2 351 aa13.48□□□□□ -0.25
UBE3B-204ENST00000449510 SGSM3Q96HU1 749 aa13.48□□□□□ -0.25
UBE3B-204ENST00000449510 TLR10Q9BXR5 811 aa13.48□□□□□ -0.25
UBE3B-204ENST00000449510 NUCKS1Q9H1E3 243 aaKnown RBP13.48□□□□□ -0.25
UBE3B-204ENST00000449510 PCIF1Q9H4Z3 704 aa13.48□□□□□ -0.25
UBE3B-204ENST00000449510 VPS37BQ9H9H4 285 aa13.48□□□□□ -0.25
UBE3B-204ENST00000449510 PLAGL2Q9UPG8 496 aa13.48□□□□□ -0.25
UBE3B-204ENST00000449510 USH1CQ9Y6N9 552 aa13.48□□□□□ -0.25
UBE3B-204ENST00000449510 TRIM37O94972 964 aa13.48□□□□□ -0.25
UBE3B-204ENST00000449510 CETN2P41208 172 aa13.48□□□□□ -0.25
UBE3B-204ENST00000449510 KAZNQ674X7 775 aa13.48□□□□□ -0.25
UBE3B-204ENST00000449510 TTI2Q6NXR4 508 aa13.48□□□□□ -0.25
UBE3B-204ENST00000449510 GJB7Q6PEY0 223 aa13.48□□□□□ -0.25
UBE3B-204ENST00000449510 SRRM1Q8IYB3 904 aaKnown RBP13.48□□□□□ -0.25
UBE3B-204ENST00000449510 GLIS3Q8NEA6 775 aa13.48□□□□□ -0.25
UBE3B-204ENST00000449510 SUPT20HQ8NEM7 779 aa13.48□□□□□ -0.25
UBE3B-204ENST00000449510 STMN2Q93045 179 aa13.48□□□□□ -0.25
UBE3B-204ENST00000449510 STAMBPL1Q96FJ0 436 aa13.48□□□□□ -0.25
UBE3B-204ENST00000449510 FAM205AQ6ZU69 1335 aa13.48□□□□□ -0.25
UBE3B-204ENST00000449510 WDR19Q8NEZ3 1342 aa13.48□□□□□ -0.25
UBE3B-204ENST00000449510 RPS8P62241 208 aaKnown RBP13.48□□□□□ -0.25
UBE3B-204ENST00000449510 PDXDC2PQ6P474 469 aa13.48□□□□□ -0.25
UBE3B-204ENST00000449510 PDXDC1Q6P996 788 aa13.48□□□□□ -0.25
UBE3B-204ENST00000449510 PPM1KQ8N3J5 372 aa13.48□□□□□ -0.25
UBE3B-204ENST00000449510 GIMAP8Q8ND71 665 aaPredicted RBP13.48□□□□□ -0.25
UBE3B-204ENST00000449510 ZKSCAN4Q969J2 545 aaPredicted RBP13.48□□□□□ -0.25
UBE3B-204ENST00000449510 ETNK1Q9HBU6 452 aa13.48□□□□□ -0.25
UBE3B-204ENST00000449510 IKBKGQ9Y6K9 419 aa13.48□□□□□ -0.25
UBE3B-204ENST00000449510 ARHGEF28Q8N1W1 1705 aaKnown RBP13.48□□□□□ -0.25
UBE3B-204ENST00000449510 HECW2Q9P2P5 1572 aa13.47□□□□□ -0.25
UBE3B-204ENST00000449510 TXNDC9O14530 226 aa13.47□□□□□ -0.25
UBE3B-204ENST00000449510 STAT3P40763 770 aa13.47□□□□□ -0.25
UBE3B-204ENST00000449510 CASP7P55210 303 aa13.47□□□□□ -0.25
UBE3B-204ENST00000449510 NT5DC1Q5TFE4 455 aa13.47□□□□□ -0.25
UBE3B-204ENST00000449510 HHATQ5VTY9 493 aa13.47□□□□□ -0.25
UBE3B-204ENST00000449510 ADGRA1Q86SQ6 560 aa13.47□□□□□ -0.25
UBE3B-204ENST00000449510 LONP2Q86WA8 852 aa13.47□□□□□ -0.25
UBE3B-204ENST00000449510 SCYL3Q8IZE3 742 aa13.47□□□□□ -0.25
UBE3B-204ENST00000449510 SLC17A8Q8NDX2 589 aa13.47□□□□□ -0.25
UBE3B-204ENST00000449510 PSTPIP2Q9H939 334 aa13.47□□□□□ -0.25
UBE3B-204ENST00000449510 DCP1AQ9NPI6 582 aaPredicted RBP13.47□□□□□ -0.25
UBE3B-204ENST00000449510 DDX20Q9UHI6 824 aaKnown RBP13.47□□□□□ -0.25
UBE3B-204ENST00000449510 PLEKHG1Q9ULL1 1385 aa13.47□□□□□ -0.25
UBE3B-204ENST00000449510 GBP1P32455 592 aa13.47□□□□□ -0.25
UBE3B-204ENST00000449510 AARSP49588 968 aaKnown RBP eCLIP13.47□□□□□ -0.25
UBE3B-204ENST00000449510 GLE1Q53GS7 698 aaKnown RBP13.47□□□□□ -0.25
UBE3B-204ENST00000449510 CAPRIN2Q6IMN6 1127 aaKnown RBP13.47□□□□□ -0.25
UBE3B-204ENST00000449510 DPH6Q7L8W6 267 aa13.47□□□□□ -0.25
UBE3B-204ENST00000449510 TEX2Q8IWB9 1127 aa13.47□□□□□ -0.25
UBE3B-204ENST00000449510 AENQ8WTP8 325 aaKnown RBP13.47□□□□□ -0.25
UBE3B-204ENST00000449510 CUL5Q93034 780 aa13.47□□□□□ -0.25
UBE3B-204ENST00000449510 SAAL1Q96ER3 474 aa13.47□□□□□ -0.25
UBE3B-204ENST00000449510 FAM118BQ9BPY3 351 aa13.47□□□□□ -0.25
UBE3B-204ENST00000449510 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.47□□□□□ -0.25
UBE3B-204ENST00000449510 PDS5AQ29RF7 1337 aaKnown RBP13.47□□□□□ -0.25
UBE3B-204ENST00000449510 POTEB3A0JP26 581 aa13.47□□□□□ -0.25
UBE3B-204ENST00000449510 POTECB2RU33 542 aa13.47□□□□□ -0.25
UBE3B-204ENST00000449510 TCP11X1B4DZS4 312 aa13.47□□□□□ -0.25
UBE3B-204ENST00000449510 PRPHP41219 470 aa13.47□□□□□ -0.25
UBE3B-204ENST00000449510 POTEBQ6S5H4 581 aa13.47□□□□□ -0.25
UBE3B-204ENST00000449510 CADPS2Q86UW7 1296 aa13.47□□□□□ -0.25
UBE3B-204ENST00000449510 ZBTB10Q96DT7 871 aa13.47□□□□□ -0.25
UBE3B-204ENST00000449510 MTRQ99707 1265 aa13.47□□□□□ -0.25
UBE3B-204ENST00000449510 PLVAPQ9BX97 442 aa13.47□□□□□ -0.25
UBE3B-204ENST00000449510 NOD2Q9HC29 1040 aa13.47□□□□□ -0.25
UBE3B-204ENST00000449510 FGFR1OP2Q9NVK5 253 aa13.47□□□□□ -0.25
UBE3B-204ENST00000449510 NOP53Q9NZM5 478 aaKnown RBP13.47□□□□□ -0.25
UBE3B-204ENST00000449510 RNF14Q9UBS8 474 aa13.47□□□□□ -0.25
UBE3B-204ENST00000449510 KIDINS220Q9ULH0 1771 aa13.46□□□□□ -0.25
UBE3B-204ENST00000449510 USP17L15C9J2P7 530 aa13.46□□□□□ -0.25
UBE3B-204ENST00000449510 USP17L13C9JLJ4 530 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms