RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 ZCWPW1Q9H0M4 648 aa14.76□□□□□ -0.05
SYNGAP1-204ENST00000449372 CNTNAP5Q8WYK1 1306 aa14.76□□□□□ -0.05
SYNGAP1-204ENST00000449372 ECEL1O95672 775 aa14.76□□□□□ -0.05
SYNGAP1-204ENST00000449372 MYBL1P10243 752 aa14.76□□□□□ -0.05
SYNGAP1-204ENST00000449372 TMTC3Q6ZXV5 915 aa14.76□□□□□ -0.05
SYNGAP1-204ENST00000449372 IQCKQ8N0W5 287 aa14.76□□□□□ -0.05
SYNGAP1-204ENST00000449372 CCDC97Q96F63 343 aaPredicted RBP14.76□□□□□ -0.05
SYNGAP1-204ENST00000449372 SLC5A4Q9NY91 659 aa14.76□□□□□ -0.05
SYNGAP1-204ENST00000449372 REXO2Q9Y3B8 237 aaKnown RBP14.76□□□□□ -0.05
SYNGAP1-204ENST00000449372 CCT6AP40227 531 aaKnown RBP14.75□□□□□ -0.05
SYNGAP1-204ENST00000449372 CCDC63Q8NA47 563 aa14.75□□□□□ -0.05
SYNGAP1-204ENST00000449372 OXER1Q8TDS5 423 aa14.75□□□□□ -0.05
SYNGAP1-204ENST00000449372 TRIM47Q96LD4 638 aa14.75□□□□□ -0.05
SYNGAP1-204ENST00000449372 CHP1Q99653 195 aa14.75□□□□□ -0.05
SYNGAP1-204ENST00000449372 KDM4CQ9H3R0 1056 aa14.75□□□□□ -0.05
SYNGAP1-204ENST00000449372 CUEDC2Q9H467 287 aa14.75□□□□□ -0.05
SYNGAP1-204ENST00000449372 GPR75-ASB3A0A0A6YYF3 556 aa14.75□□□□□ -0.05
SYNGAP1-204ENST00000449372 ITGB3BPQ13352 177 aaPredicted RBP14.75□□□□□ -0.05
SYNGAP1-204ENST00000449372 RIPK1Q13546 671 aa14.75□□□□□ -0.05
SYNGAP1-204ENST00000449372 KRT31Q15323 416 aa14.75□□□□□ -0.05
SYNGAP1-204ENST00000449372 CCDC82Q8N4S0 544 aa14.75□□□□□ -0.05
SYNGAP1-204ENST00000449372 ARFGAP2Q8N6H7 521 aa14.75□□□□□ -0.05
SYNGAP1-204ENST00000449372 AGAP11Q8TF27 550 aa14.75□□□□□ -0.05
SYNGAP1-204ENST00000449372 CCT6BQ92526 530 aa14.75□□□□□ -0.05
SYNGAP1-204ENST00000449372 TBC1D5Q92609 795 aa14.75□□□□□ -0.05
SYNGAP1-204ENST00000449372 THAP9Q9H5L6 903 aa14.75□□□□□ -0.05
SYNGAP1-204ENST00000449372 GGA1Q9UJY5 639 aa14.75□□□□□ -0.05
SYNGAP1-204ENST00000449372 GAKO14976 1311 aa14.75□□□□□ -0.05
SYNGAP1-204ENST00000449372 FAM205AQ6ZU69 1335 aa14.75□□□□□ -0.05
SYNGAP1-204ENST00000449372 SNED1Q8TER0 1413 aa14.75□□□□□ -0.05
SYNGAP1-204ENST00000449372 LRRC10BA6NIK2 292 aa14.75□□□□□ -0.05
SYNGAP1-204ENST00000449372 EIF4E1BA6NMX2 242 aaKnown RBP14.75□□□□□ -0.05
SYNGAP1-204ENST00000449372 RNF8O76064 485 aa14.75□□□□□ -0.05
SYNGAP1-204ENST00000449372 UFL1O94874 794 aa14.75□□□□□ -0.05
SYNGAP1-204ENST00000449372 LUC7L3O95232 432 aaKnown RBP14.75□□□□□ -0.05
SYNGAP1-204ENST00000449372 IDEP14735 1019 aa14.75□□□□□ -0.05
SYNGAP1-204ENST00000449372 CDC25AP30304 524 aa14.75□□□□□ -0.05
SYNGAP1-204ENST00000449372 DPYDQ12882 1025 aa14.75□□□□□ -0.05
SYNGAP1-204ENST00000449372 LRRC23Q53EV4 343 aaPredicted RBP14.75□□□□□ -0.05
SYNGAP1-204ENST00000449372 CCDC155Q8N6L0 562 aa14.75□□□□□ -0.05
SYNGAP1-204ENST00000449372 L3MBTL3Q96JM7 780 aaPredicted RBP14.75□□□□□ -0.05
SYNGAP1-204ENST00000449372 VPS16Q9H269 839 aa14.75□□□□□ -0.05
SYNGAP1-204ENST00000449372 ADAMTSL1Q8N6G6 1762 aa14.75□□□□□ -0.05
SYNGAP1-204ENST00000449372 HMGB1P1B2RPK0 211 aaPredicted RBP14.74□□□□□ -0.05
SYNGAP1-204ENST00000449372 PPIP5K2O43314 1243 aa14.74□□□□□ -0.05
SYNGAP1-204ENST00000449372 GHRP10912 638 aa14.74□□□□□ -0.05
SYNGAP1-204ENST00000449372 TRIM21P19474 475 aaKnown RBP14.74□□□□□ -0.05
SYNGAP1-204ENST00000449372 ABCD1P33897 745 aa14.74□□□□□ -0.05
SYNGAP1-204ENST00000449372 CUL4BQ13620 913 aa14.74□□□□□ -0.05
SYNGAP1-204ENST00000449372 FAM47AQ5JRC9 791 aa14.74□□□□□ -0.05
SYNGAP1-204ENST00000449372 MTHFD1LQ6UB35 978 aa14.74□□□□□ -0.05
SYNGAP1-204ENST00000449372 SRBD1Q8N5C6 995 aaKnown RBP14.74□□□□□ -0.05
SYNGAP1-204ENST00000449372 STIM2Q9P246 746 aa14.74□□□□□ -0.05
SYNGAP1-204ENST00000449372 TSKSQ9UJT2 592 aa14.74□□□□□ -0.05
SYNGAP1-204ENST00000449372 VAV2P52735 878 aa14.74□□□□□ -0.05
SYNGAP1-204ENST00000449372 RHBDL3P58872 404 aa14.74□□□□□ -0.05
SYNGAP1-204ENST00000449372 GSTO1P78417 241 aa14.74□□□□□ -0.05
SYNGAP1-204ENST00000449372 NR5A1Q13285 461 aa14.74□□□□□ -0.05
SYNGAP1-204ENST00000449372 TCP11X2Q5H9J9 407 aa14.74□□□□□ -0.05
SYNGAP1-204ENST00000449372 GKAP1Q5VSY0 366 aaPredicted RBP14.74□□□□□ -0.05
SYNGAP1-204ENST00000449372 ZNF662Q6ZS27 426 aa14.74□□□□□ -0.05
SYNGAP1-204ENST00000449372 COL23A1Q86Y22 540 aaPredicted RBP14.74□□□□□ -0.05
SYNGAP1-204ENST00000449372 SP8Q8IXZ3 490 aa14.74□□□□□ -0.05
SYNGAP1-204ENST00000449372 GALNT15Q8N3T1 639 aa14.74□□□□□ -0.05
SYNGAP1-204ENST00000449372 OSBPL1AQ9BXW6 950 aa14.74□□□□□ -0.05
SYNGAP1-204ENST00000449372 TCP11L1Q9NUJ3 509 aa14.74□□□□□ -0.05
SYNGAP1-204ENST00000449372 RNF225M0QZC1 329 aaPredicted RBP14.74□□□□□ -0.05
SYNGAP1-204ENST00000449372 TRAPPC3O43617 180 aa14.74□□□□□ -0.05
SYNGAP1-204ENST00000449372 UBA7P41226 1012 aa14.74□□□□□ -0.05
SYNGAP1-204ENST00000449372 GOPCQ9HD26 462 aa14.74□□□□□ -0.05
SYNGAP1-204ENST00000449372 BACH1O14867 736 aa14.73□□□□□ -0.05
SYNGAP1-204ENST00000449372 EARS2Q5JPH6 523 aaKnown RBP14.73□□□□□ -0.05
SYNGAP1-204ENST00000449372 SH3RF1Q7Z6J0 888 aa14.73□□□□□ -0.05
SYNGAP1-204ENST00000449372 GORASP1Q9BQQ3 440 aa14.73□□□□□ -0.05
SYNGAP1-204ENST00000449372 MCM9Q9NXL9 1143 aa14.73□□□□□ -0.05
SYNGAP1-204ENST00000449372 TAB2Q9NYJ8 693 aa14.73□□□□□ -0.05
SYNGAP1-204ENST00000449372 PCDHGA4Q9Y5G9 962 aa14.73□□□□□ -0.05
SYNGAP1-204ENST00000449372 TMC4Q7Z404 712 aa14.73□□□□□ -0.05
SYNGAP1-204ENST00000449372 TBC1D1Q86TI0 1168 aaPredicted RBP14.73□□□□□ -0.05
SYNGAP1-204ENST00000449372 RBM41Q96IZ5 413 aaKnown RBP14.73□□□□□ -0.05
SYNGAP1-204ENST00000449372 PANK4Q9NVE7 773 aa14.73□□□□□ -0.05
SYNGAP1-204ENST00000449372 MYH8P13535 1937 aa14.73□□□□□ -0.05
SYNGAP1-204ENST00000449372 SRGNP10124 158 aa14.73□□□□□ -0.05
SYNGAP1-204ENST00000449372 NOVP48745 357 aa14.73□□□□□ -0.05
SYNGAP1-204ENST00000449372 GALNT17Q6IS24 598 aa14.73□□□□□ -0.05
SYNGAP1-204ENST00000449372 CPLX4Q7Z7G2 160 aa14.73□□□□□ -0.05
SYNGAP1-204ENST00000449372 PLEKHG4BQ96PX9 1271 aa14.73□□□□□ -0.05
SYNGAP1-204ENST00000449372 ZNF232Q9UNY5 417 aa14.73□□□□□ -0.05
SYNGAP1-204ENST00000449372 CCDC194A0A1B0GVG4 234 aa14.73□□□□□ -0.05
SYNGAP1-204ENST00000449372 A0A1B0GVG6 124 aa14.73□□□□□ -0.05
SYNGAP1-204ENST00000449372 STXBP3O00186 592 aa14.73□□□□□ -0.05
SYNGAP1-204ENST00000449372 RPN1P04843 607 aaKnown RBP14.73□□□□□ -0.05
SYNGAP1-204ENST00000449372 DHTKD1Q96HY7 919 aaPredicted RBP14.73□□□□□ -0.05
SYNGAP1-204ENST00000449372 LRRC27Q9C0I9 530 aa14.73□□□□□ -0.05
SYNGAP1-204ENST00000449372 ATP6V0A2Q9Y487 856 aa14.73□□□□□ -0.05
SYNGAP1-204ENST00000449372 GREB1LQ9C091 1923 aaPredicted RBP14.72□□□□□ -0.05
SYNGAP1-204ENST00000449372 GOLGA6L10A6NI86 522 aa14.72□□□□□ -0.05
SYNGAP1-204ENST00000449372 LAD1O00515 517 aa14.72□□□□□ -0.05
SYNGAP1-204ENST00000449372 ZSCAN9O15535 394 aaPredicted RBP14.72□□□□□ -0.05
SYNGAP1-204ENST00000449372 TCP1P17987 556 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms