RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 JPH1Q9HDC5 661 aaPredicted RBP21.63■■□□□ 1.05
RPS28-202ENST00000449223 TUFT1Q9NNX1 390 aa21.63■■□□□ 1.05
RPS28-202ENST00000449223 WDR64B1ANS9 1081 aa21.62■■□□□ 1.05
RPS28-202ENST00000449223 CCNE2O96020 404 aa21.62■■□□□ 1.05
RPS28-202ENST00000449223 CCT6AP40227 531 aaKnown RBP21.62■■□□□ 1.05
RPS28-202ENST00000449223 TTLL4Q14679 1199 aa21.62■■□□□ 1.05
RPS28-202ENST00000449223 CATSPER3Q86XQ3 398 aa21.62■■□□□ 1.05
RPS28-202ENST00000449223 LRRC15Q8TF66 581 aa21.62■■□□□ 1.05
RPS28-202ENST00000449223 DHX58Q96C10 678 aa21.62■■□□□ 1.05
RPS28-202ENST00000449223 CCDC34Q96HJ3 373 aa21.62■■□□□ 1.05
RPS28-202ENST00000449223 PANK2Q9BZ23 570 aa21.62■■□□□ 1.05
RPS28-202ENST00000449223 TNMDQ9H2S6 317 aa21.62■■□□□ 1.05
RPS28-202ENST00000449223 PKD2L1Q9P0L9 805 aa21.62■■□□□ 1.05
RPS28-202ENST00000449223 SLC9A2Q9UBY0 812 aa21.62■■□□□ 1.05
RPS28-202ENST00000449223 TCEAL9Q9UHQ7 104 aa21.62■■□□□ 1.05
RPS28-202ENST00000449223 SERTAD1Q9UHV2 236 aa21.62■■□□□ 1.05
RPS28-202ENST00000449223 MED24O75448 989 aa21.61■■□□□ 1.05
RPS28-202ENST00000449223 FARP2O94887 1054 aaPredicted RBP21.61■■□□□ 1.05
RPS28-202ENST00000449223 ARIH2O95376 493 aa21.61■■□□□ 1.05
RPS28-202ENST00000449223 STAT6P42226 847 aa21.61■■□□□ 1.05
RPS28-202ENST00000449223 MDM2Q00987 491 aaPredicted RBP21.61■■□□□ 1.05
RPS28-202ENST00000449223 CAP1Q01518 475 aa21.61■■□□□ 1.05
RPS28-202ENST00000449223 ECM1Q16610 540 aa21.61■■□□□ 1.05
RPS28-202ENST00000449223 ZSCAN23Q3MJ62 389 aa21.61■■□□□ 1.05
RPS28-202ENST00000449223 METTL7BQ6UX53 244 aa21.61■■□□□ 1.05
RPS28-202ENST00000449223 EEPD1Q7L9B9 569 aa21.61■■□□□ 1.05
RPS28-202ENST00000449223 CEP57L1Q8IYX8 460 aa21.61■■□□□ 1.05
RPS28-202ENST00000449223 FLRT1Q9NZU1 646 aa21.61■■□□□ 1.05
RPS28-202ENST00000449223 NRBP1Q9UHY1 535 aa21.61■■□□□ 1.05
RPS28-202ENST00000449223 CHMP2AO43633 222 aa21.6■■□□□ 1.05
RPS28-202ENST00000449223 SLITRK3O94933 977 aa21.6■■□□□ 1.05
RPS28-202ENST00000449223 ATG7O95352 703 aa21.6■■□□□ 1.05
RPS28-202ENST00000449223 CYP2B6P20813 491 aa21.6■■□□□ 1.05
RPS28-202ENST00000449223 MIER3Q7Z3K6 550 aa21.6■■□□□ 1.05
RPS28-202ENST00000449223 RASSF8Q8NHQ8 419 aa21.6■■□□□ 1.05
RPS28-202ENST00000449223 CDK5RAP3Q96JB5 506 aa21.6■■□□□ 1.05
RPS28-202ENST00000449223 BLOC1S4Q9NUP1 217 aa21.6■■□□□ 1.05
RPS28-202ENST00000449223 KBTBD4Q9NVX7 518 aa21.6■■□□□ 1.05
RPS28-202ENST00000449223 POTEB3A0JP26 581 aa21.6■■□□□ 1.05
RPS28-202ENST00000449223 DDX39AO00148 427 aaKnown RBP21.6■■□□□ 1.05
RPS28-202ENST00000449223 P4HBP07237 508 aaKnown RBP21.6■■□□□ 1.05
RPS28-202ENST00000449223 ACVR2BQ13705 512 aa21.6■■□□□ 1.05
RPS28-202ENST00000449223 CELF3Q5SZQ8 465 aaKnown RBP21.6■■□□□ 1.05
RPS28-202ENST00000449223 POTEBQ6S5H4 581 aa21.6■■□□□ 1.05
RPS28-202ENST00000449223 TRMT44Q8IYL2 757 aaKnown RBP21.6■■□□□ 1.05
RPS28-202ENST00000449223 HOOK1Q9UJC3 728 aaKnown RBP21.6■■□□□ 1.05
RPS28-202ENST00000449223 PCDHA10Q9Y5I2 948 aa21.6■■□□□ 1.05
RPS28-202ENST00000449223 LYPLA2O95372 231 aa21.59■■□□□ 1.05
RPS28-202ENST00000449223 MYL1P05976 194 aa21.59■■□□□ 1.05
RPS28-202ENST00000449223 FLT3LGP49771 235 aa21.59■■□□□ 1.05
RPS28-202ENST00000449223 CAMK4Q16566 473 aa21.59■■□□□ 1.05
RPS28-202ENST00000449223 CCL14Q16627 93 aa21.59■■□□□ 1.05
RPS28-202ENST00000449223 LY6KQ17RY6 165 aa21.59■■□□□ 1.05
RPS28-202ENST00000449223 CYFIP1Q7L576 1253 aa21.59■■□□□ 1.05
RPS28-202ENST00000449223 EMID1Q96A84 441 aaPredicted RBP21.59■■□□□ 1.05
RPS28-202ENST00000449223 ERO1AQ96HE7 468 aa21.59■■□□□ 1.05
RPS28-202ENST00000449223 BCAS3Q9H6U6 928 aa21.59■■□□□ 1.05
RPS28-202ENST00000449223 PDGFCQ9NRA1 345 aa21.59■■□□□ 1.05
RPS28-202ENST00000449223 FKTNO75072 461 aa21.58■■□□□ 1.04
RPS28-202ENST00000449223 GGPS1O95749 300 aa21.58■■□□□ 1.04
RPS28-202ENST00000449223 TXNP10599 105 aaKnown RBP21.58■■□□□ 1.04
RPS28-202ENST00000449223 HOXD10P28358 340 aa21.58■■□□□ 1.04
RPS28-202ENST00000449223 ACTR2P61160 394 aa21.58■■□□□ 1.04
RPS28-202ENST00000449223 PRKCZQ05513 592 aa21.58■■□□□ 1.04
RPS28-202ENST00000449223 IQSEC1Q6DN90 963 aa21.58■■□□□ 1.04
RPS28-202ENST00000449223 ABHD15Q6UXT9 468 aa21.58■■□□□ 1.04
RPS28-202ENST00000449223 DNAJC5GQ8N7S2 189 aa21.58■■□□□ 1.04
RPS28-202ENST00000449223 SPATA20Q8TB22 786 aa21.58■■□□□ 1.04
RPS28-202ENST00000449223 LARP4BQ92615 738 aaKnown RBP21.58■■□□□ 1.04
RPS28-202ENST00000449223 PAGE5Q96GU1 130 aa21.58■■□□□ 1.04
RPS28-202ENST00000449223 DYDC2Q96IM9 177 aa21.58■■□□□ 1.04
RPS28-202ENST00000449223 MTRQ99707 1265 aa21.58■■□□□ 1.04
RPS28-202ENST00000449223 RGL1Q9NZL6 768 aa21.58■■□□□ 1.04
RPS28-202ENST00000449223 SRRDQ9UH36 339 aa21.58■■□□□ 1.04
RPS28-202ENST00000449223 GABRQQ9UN88 632 aa21.58■■□□□ 1.04
RPS28-202ENST00000449223 KIAA1024Q9UPX6 916 aa21.58■■□□□ 1.04
RPS28-202ENST00000449223 CEP350Q5VT06 3117 aa21.57■■□□□ 1.04
RPS28-202ENST00000449223 IGKV6D-21A0A0A0MT36 114 aa21.57■■□□□ 1.04
RPS28-202ENST00000449223 POTEFA5A3E0 1075 aa21.57■■□□□ 1.04
RPS28-202ENST00000449223 NKRFO15226 690 aaKnown RBP eCLIP21.57■■□□□ 1.04
RPS28-202ENST00000449223 ECM2O94769 699 aaPredicted RBP21.57■■□□□ 1.04
RPS28-202ENST00000449223 ZNF865P0CJ78 1059 aaPredicted RBP21.57■■□□□ 1.04
RPS28-202ENST00000449223 ZNF445P59923 1031 aa21.57■■□□□ 1.04
RPS28-202ENST00000449223 POSTNQ15063 836 aa21.57■■□□□ 1.04
RPS28-202ENST00000449223 DUSP28Q4G0W2 176 aa21.57■■□□□ 1.04
RPS28-202ENST00000449223 NT5DC1Q5TFE4 455 aa21.57■■□□□ 1.04
RPS28-202ENST00000449223 POTEGQ6S5H5 508 aa21.57■■□□□ 1.04
RPS28-202ENST00000449223 KCNK18Q7Z418 384 aa21.57■■□□□ 1.04
RPS28-202ENST00000449223 CD99L2Q8TCZ2 262 aa21.57■■□□□ 1.04
RPS28-202ENST00000449223 RAD54LQ92698 747 aa21.57■■□□□ 1.04
RPS28-202ENST00000449223 LXNQ9BS40 222 aa21.57■■□□□ 1.04
RPS28-202ENST00000449223 WBP1LQ9NX94 342 aa21.57■■□□□ 1.04
RPS28-202ENST00000449223 QARSP47897 775 aaKnown RBP21.56■■□□□ 1.04
RPS28-202ENST00000449223 CYP4A11Q02928 519 aa21.56■■□□□ 1.04
RPS28-202ENST00000449223 ARHGEF6Q15052 776 aa21.56■■□□□ 1.04
RPS28-202ENST00000449223 ZRSR1Q15695 479 aaKnown RBP21.56■■□□□ 1.04
RPS28-202ENST00000449223 CNNM4Q6P4Q7 775 aa21.56■■□□□ 1.04
RPS28-202ENST00000449223 C4orf19Q8IY42 314 aa21.56■■□□□ 1.04
RPS28-202ENST00000449223 ZNF296Q8WUU4 475 aaPredicted RBP21.56■■□□□ 1.04
RPS28-202ENST00000449223 ZSWIM4Q9H7M6 989 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms