RNA–Protein interactions for RNA: ENST00000447419.6

PTX4-203, Transcript of pentraxin 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTX4, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-203ENST00000447419 UBE2OQ9C0C9 1292 aaKnown RBP23.29■■□□□ 1.32
PTX4-203ENST00000447419 NOD1Q9Y239 953 aa23.29■■□□□ 1.32
PTX4-203ENST00000447419 HAS3O00219 553 aa23.28■■□□□ 1.32
PTX4-203ENST00000447419 CCL23P55773 120 aa23.28■■□□□ 1.32
PTX4-203ENST00000447419 ACTR2P61160 394 aa23.28■■□□□ 1.32
PTX4-203ENST00000447419 PTGISQ16647 500 aa23.28■■□□□ 1.32
PTX4-203ENST00000447419 NIPA1Q7RTP0 329 aa23.28■■□□□ 1.32
PTX4-203ENST00000447419 KATNAL1Q9BW62 490 aa23.28■■□□□ 1.32
PTX4-203ENST00000447419 HIPK3Q9H422 1215 aa23.28■■□□□ 1.32
PTX4-203ENST00000447419 MSH4O15457 936 aa23.28■■□□□ 1.32
PTX4-203ENST00000447419 DHX15O43143 795 aaKnown RBP23.28■■□□□ 1.32
PTX4-203ENST00000447419 USP11P51784 963 aa23.28■■□□□ 1.32
PTX4-203ENST00000447419 SETQ01105 290 aaPredicted RBP23.28■■□□□ 1.32
PTX4-203ENST00000447419 GLG1Q92896 1179 aa23.28■■□□□ 1.32
PTX4-203ENST00000447419 RNPEPQ9H4A4 650 aa23.28■■□□□ 1.32
PTX4-203ENST00000447419 BRMS1Q9HCU9 246 aa23.28■■□□□ 1.32
PTX4-203ENST00000447419 SLC37A4O43826 429 aa23.27■■□□□ 1.32
PTX4-203ENST00000447419 FAM177A1Q8N128 213 aaPredicted RBP23.27■■□□□ 1.32
PTX4-203ENST00000447419 TNFRSF25Q93038 417 aa23.27■■□□□ 1.32
PTX4-203ENST00000447419 PCYT2Q99447 389 aa23.27■■□□□ 1.32
PTX4-203ENST00000447419 GTF2IRD1Q9UHL9 959 aa23.27■■□□□ 1.32
PTX4-203ENST00000447419 NFASCO94856 1347 aa23.27■■□□□ 1.32
PTX4-203ENST00000447419 CHMP2AO43633 222 aa23.26■■□□□ 1.31
PTX4-203ENST00000447419 CCNT1O60563 726 aaKnown RBP23.26■■□□□ 1.31
PTX4-203ENST00000447419 TIMP1P01033 207 aa23.26■■□□□ 1.31
PTX4-203ENST00000447419 SMIM10L2AP0DMW4 78 aa23.26■■□□□ 1.31
PTX4-203ENST00000447419 SMIM10L2BP0DMW5 78 aa23.26■■□□□ 1.31
PTX4-203ENST00000447419 EPHB4P54760 987 aa23.26■■□□□ 1.31
PTX4-203ENST00000447419 HMGN5P82970 282 aaKnown RBP23.26■■□□□ 1.31
PTX4-203ENST00000447419 TRMT1LQ7Z2T5 733 aaKnown RBP23.26■■□□□ 1.31
PTX4-203ENST00000447419 CTAGE1Q96RT6 745 aa23.26■■□□□ 1.31
PTX4-203ENST00000447419 NOC4LQ9BVI4 516 aaKnown RBP23.26■■□□□ 1.31
PTX4-203ENST00000447419 PRO3102Q9H379 93 aa23.26■■□□□ 1.31
PTX4-203ENST00000447419 SETD4Q9NVD3 440 aa23.26■■□□□ 1.31
PTX4-203ENST00000447419 DDX25Q9UHL0 483 aaKnown RBP23.26■■□□□ 1.31
PTX4-203ENST00000447419 SCN10AQ9Y5Y9 1956 aa23.26■■□□□ 1.31
PTX4-203ENST00000447419 WNT7AO00755 349 aa23.25■■□□□ 1.31
PTX4-203ENST00000447419 ATP2B1P20020 1258 aa23.25■■□□□ 1.31
PTX4-203ENST00000447419 NEK8Q86SG6 692 aa23.25■■□□□ 1.31
PTX4-203ENST00000447419 SCLYQ96I15 445 aa23.25■■□□□ 1.31
PTX4-203ENST00000447419 CSF2RAP15509 400 aa23.24■■□□□ 1.31
PTX4-203ENST00000447419 WNT8BQ93098 351 aa23.24■■□□□ 1.31
PTX4-203ENST00000447419 ZBTB10Q96DT7 871 aa23.24■■□□□ 1.31
PTX4-203ENST00000447419 WNT8AQ9H1J5 351 aa23.24■■□□□ 1.31
PTX4-203ENST00000447419 ZNF215Q9UL58 517 aaPredicted RBP23.24■■□□□ 1.31
PTX4-203ENST00000447419 BACH1O14867 736 aa23.23■■□□□ 1.31
PTX4-203ENST00000447419 SUPT20HL2P0C7V6 817 aa23.23■■□□□ 1.31
PTX4-203ENST00000447419 ACRP10323 421 aa23.23■■□□□ 1.31
PTX4-203ENST00000447419 GJB2P29033 226 aa23.23■■□□□ 1.31
PTX4-203ENST00000447419 MCM2P49736 904 aa23.23■■□□□ 1.31
PTX4-203ENST00000447419 PTPN11Q06124 597 aaPredicted RBP23.23■■□□□ 1.31
PTX4-203ENST00000447419 C17orf102A2RUQ5 167 aa23.23■■□□□ 1.31
PTX4-203ENST00000447419 IGBP1P78318 339 aa23.23■■□□□ 1.31
PTX4-203ENST00000447419 FPGSQ05932 587 aa23.23■■□□□ 1.31
PTX4-203ENST00000447419 SAFBQ15424 915 aaKnown RBP eCLIP23.23■■□□□ 1.31
PTX4-203ENST00000447419 Q4G0T1 1027 aa23.23■■□□□ 1.31
PTX4-203ENST00000447419 HABP4Q5JVS0 413 aaKnown RBP23.23■■□□□ 1.31
PTX4-203ENST00000447419 C9orf50Q5SZB4 431 aa23.23■■□□□ 1.31
PTX4-203ENST00000447419 LRCH2Q5VUJ6 765 aa23.23■■□□□ 1.31
PTX4-203ENST00000447419 SESTD1Q86VW0 696 aa23.23■■□□□ 1.31
PTX4-203ENST00000447419 DHX38Q92620 1227 aaKnown RBP23.23■■□□□ 1.31
PTX4-203ENST00000447419 SEZ6LQ9BYH1 1024 aa23.23■■□□□ 1.31
PTX4-203ENST00000447419 AZI2Q9H6S1 392 aa23.23■■□□□ 1.31
PTX4-203ENST00000447419 TBC1D22BQ9NU19 505 aa23.23■■□□□ 1.31
PTX4-203ENST00000447419 FOXD4L1Q9NU39 408 aa23.23■■□□□ 1.31
PTX4-203ENST00000447419 TCEAL9Q9UHQ7 104 aa23.23■■□□□ 1.31
PTX4-203ENST00000447419 SAMM50Q9Y512 469 aa23.23■■□□□ 1.31
PTX4-203ENST00000447419 LTBP2Q14767 1821 aa23.22■■□□□ 1.31
PTX4-203ENST00000447419 CYP3A7-CYP3A51PA0A087WV96 503 aa23.22■■□□□ 1.31
PTX4-203ENST00000447419 TREHO43280 583 aa23.22■■□□□ 1.31
PTX4-203ENST00000447419 GAS7O60861 476 aa23.22■■□□□ 1.31
PTX4-203ENST00000447419 CYP3A7P24462 503 aa23.22■■□□□ 1.31
PTX4-203ENST00000447419 MFSD5Q6N075 450 aa23.22■■□□□ 1.31
PTX4-203ENST00000447419 SWSAP1Q6NVH7 229 aa23.22■■□□□ 1.31
PTX4-203ENST00000447419 POTEDQ86YR6 584 aa23.22■■□□□ 1.31
PTX4-203ENST00000447419 CCDC60Q8IWA6 550 aaPredicted RBP23.22■■□□□ 1.31
PTX4-203ENST00000447419 FBXO18Q8NFZ0 1043 aa23.22■■□□□ 1.31
PTX4-203ENST00000447419 SLC5A5Q92911 643 aa23.22■■□□□ 1.31
PTX4-203ENST00000447419 ATP6V0A1Q93050 837 aa23.22■■□□□ 1.31
PTX4-203ENST00000447419 UNC45AQ9H3U1 944 aa23.22■■□□□ 1.31
PTX4-203ENST00000447419 SMARCAD1Q9H4L7 1026 aa23.22■■□□□ 1.31
PTX4-203ENST00000447419 KIF28PB7ZC32 967 aa23.21■■□□□ 1.31
PTX4-203ENST00000447419 ABHD15Q6UXT9 468 aa23.21■■□□□ 1.31
PTX4-203ENST00000447419 ETNPPLQ8TBG4 499 aa23.21■■□□□ 1.31
PTX4-203ENST00000447419 ERAP1Q9NZ08 941 aa23.21■■□□□ 1.31
PTX4-203ENST00000447419 LAMA3Q16787 3333 aa23.2■■□□□ 1.31
PTX4-203ENST00000447419 LGR5O75473 907 aa23.2■■□□□ 1.3
PTX4-203ENST00000447419 STAT5BP51692 787 aa23.2■■□□□ 1.3
PTX4-203ENST00000447419 GNL2Q13823 731 aaKnown RBP23.2■■□□□ 1.3
PTX4-203ENST00000447419 SHHQ15465 462 aa23.2■■□□□ 1.3
PTX4-203ENST00000447419 LMBR1Q8WVP7 490 aa23.2■■□□□ 1.3
PTX4-203ENST00000447419 TRAPPC12Q8WVT3 735 aa23.2■■□□□ 1.3
PTX4-203ENST00000447419 MBOAT7Q96N66 472 aa23.2■■□□□ 1.3
PTX4-203ENST00000447419 TEKT3Q9BXF9 490 aa23.2■■□□□ 1.3
PTX4-203ENST00000447419 SMC3Q9UQE7 1217 aa23.2■■□□□ 1.3
PTX4-203ENST00000447419 TRPC6Q9Y210 931 aa23.2■■□□□ 1.3
PTX4-203ENST00000447419 EMSYQ7Z589 1322 aa23.19■■□□□ 1.3
PTX4-203ENST00000447419 ATG7O95352 703 aa23.19■■□□□ 1.3
PTX4-203ENST00000447419 BMP8BP34820 402 aa23.19■■□□□ 1.3
PTX4-203ENST00000447419 PPFIA1Q13136 1202 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms