RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 CD244Q9BZW8 370 aa5.97□□□□□ -1.45
HMGB1P16-201ENST00000447155 PDGFDQ9GZP0 370 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P16-201ENST00000447155 IRF2BPLQ9H1B7 796 aa5.97□□□□□ -1.45
HMGB1P16-201ENST00000447155 METTL14Q9HCE5 456 aaKnown RBP5.97□□□□□ -1.45
HMGB1P16-201ENST00000447155 EMC7Q9NPA0 242 aa5.97□□□□□ -1.45
HMGB1P16-201ENST00000447155 SPTLC3Q9NUV7 552 aa5.97□□□□□ -1.45
HMGB1P16-201ENST00000447155 PALD1Q9ULE6 856 aa5.97□□□□□ -1.45
HMGB1P16-201ENST00000447155 SIT1Q9Y3P8 196 aa5.97□□□□□ -1.45
HMGB1P16-201ENST00000447155 B3GALT1Q9Y5Z6 326 aa5.97□□□□□ -1.45
HMGB1P16-201ENST00000447155 OAS3Q9Y6K5 1087 aaKnown RBP5.97□□□□□ -1.45
HMGB1P16-201ENST00000447155 OR14I1A6ND48 311 aa5.96□□□□□ -1.46
HMGB1P16-201ENST00000447155 BIN1O00499 593 aa5.96□□□□□ -1.46
HMGB1P16-201ENST00000447155 ULK1O75385 1050 aa5.96□□□□□ -1.46
HMGB1P16-201ENST00000447155 SLC9A5Q14940 896 aa5.96□□□□□ -1.46
HMGB1P16-201ENST00000447155 ADGRF1Q5T601 910 aa5.96□□□□□ -1.46
HMGB1P16-201ENST00000447155 DLG3Q92796 817 aa5.96□□□□□ -1.46
HMGB1P16-201ENST00000447155 PUS7LQ9H0K6 701 aaKnown RBP5.96□□□□□ -1.46
HMGB1P16-201ENST00000447155 PCIF1Q9H4Z3 704 aa5.96□□□□□ -1.46
HMGB1P16-201ENST00000447155 RXFP1Q9HBX9 757 aa5.96□□□□□ -1.46
HMGB1P16-201ENST00000447155 ACSS2Q9NR19 701 aa5.96□□□□□ -1.46
HMGB1P16-201ENST00000447155 KCNH7Q9NS40 1196 aa5.96□□□□□ -1.46
HMGB1P16-201ENST00000447155 H2AFY2Q9P0M6 372 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P16-201ENST00000447155 DBR1Q9UK59 544 aaKnown RBP5.96□□□□□ -1.46
HMGB1P16-201ENST00000447155 SPO11Q9Y5K1 396 aa5.96□□□□□ -1.46
HMGB1P16-201ENST00000447155 WASHC2CQ9Y4E1 1318 aa5.96□□□□□ -1.46
HMGB1P16-201ENST00000447155 TCRBV5S2A0A599 114 aa5.95□□□□□ -1.46
HMGB1P16-201ENST00000447155 NUDT19A8MXV4 375 aa5.95□□□□□ -1.46
HMGB1P16-201ENST00000447155 SCDO00767 359 aa5.95□□□□□ -1.46
HMGB1P16-201ENST00000447155 ABLIM1O14639 778 aa5.95□□□□□ -1.46
HMGB1P16-201ENST00000447155 SDHBP21912 280 aa5.95□□□□□ -1.46
HMGB1P16-201ENST00000447155 MAPKAPK2P49137 400 aa5.95□□□□□ -1.46
HMGB1P16-201ENST00000447155 FAPQ12884 760 aa5.95□□□□□ -1.46
HMGB1P16-201ENST00000447155 RAB3GAP1Q15042 981 aa5.95□□□□□ -1.46
HMGB1P16-201ENST00000447155 FSTL4Q6MZW2 842 aa5.95□□□□□ -1.46
HMGB1P16-201ENST00000447155 CC2D1AQ6P1N0 951 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P16-201ENST00000447155 RPTNQ6XPR3 784 aa5.95□□□□□ -1.46
HMGB1P16-201ENST00000447155 IRF2BP1Q8IU81 584 aa5.95□□□□□ -1.46
HMGB1P16-201ENST00000447155 KIAA1958Q8N8K9 716 aa5.95□□□□□ -1.46
HMGB1P16-201ENST00000447155 TTLL11Q8NHH1 800 aa5.95□□□□□ -1.46
HMGB1P16-201ENST00000447155 SLC5A5Q92911 643 aa5.95□□□□□ -1.46
HMGB1P16-201ENST00000447155 TSPAN17Q96FV3 270 aa5.95□□□□□ -1.46
HMGB1P16-201ENST00000447155 TELO2Q9Y4R8 837 aa5.95□□□□□ -1.46
HMGB1P16-201ENST00000447155 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P16-201ENST00000447155 TGM5O43548 720 aa5.94□□□□□ -1.46
HMGB1P16-201ENST00000447155 LTFP02788 710 aa5.94□□□□□ -1.46
HMGB1P16-201ENST00000447155 S100BP04271 92 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P16-201ENST00000447155 CYP17A1P05093 508 aa5.94□□□□□ -1.46
HMGB1P16-201ENST00000447155 GLI1P08151 1106 aa5.94□□□□□ -1.46
HMGB1P16-201ENST00000447155 PTPN1P18031 435 aaKnown RBP5.94□□□□□ -1.46
HMGB1P16-201ENST00000447155 PDE6BP35913 854 aa5.94□□□□□ -1.46
HMGB1P16-201ENST00000447155 KIF11P52732 1056 aa5.94□□□□□ -1.46
HMGB1P16-201ENST00000447155 SESN3P58005 492 aa5.94□□□□□ -1.46
HMGB1P16-201ENST00000447155 PRR5P85299 388 aa5.94□□□□□ -1.46
HMGB1P16-201ENST00000447155 BTBD8Q5XKL5 378 aa5.94□□□□□ -1.46
HMGB1P16-201ENST00000447155 CPZQ66K79 652 aa5.94□□□□□ -1.46
HMGB1P16-201ENST00000447155 IQSEC1Q6DN90 963 aa5.94□□□□□ -1.46
HMGB1P16-201ENST00000447155 ZSWIM9Q86XI8 627 aa5.94□□□□□ -1.46
HMGB1P16-201ENST00000447155 RBM12BQ8IXT5 1001 aaKnown RBP5.94□□□□□ -1.46
HMGB1P16-201ENST00000447155 CLEC4DQ8WXI8 215 aa5.94□□□□□ -1.46
HMGB1P16-201ENST00000447155 RIC8BQ9NVN3 520 aa5.94□□□□□ -1.46
HMGB1P16-201ENST00000447155 ABCC9O60706 1549 aa5.94□□□□□ -1.46
HMGB1P16-201ENST00000447155 FAM90A27PA6NNH2 459 aa5.93□□□□□ -1.46
HMGB1P16-201ENST00000447155 DVL2O14641 736 aa5.93□□□□□ -1.46
HMGB1P16-201ENST00000447155 BUB1BO60566 1050 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P16-201ENST00000447155 KATNA1O75449 491 aa5.93□□□□□ -1.46
HMGB1P16-201ENST00000447155 SLC9A1P19634 815 aa5.93□□□□□ -1.46
HMGB1P16-201ENST00000447155 YBX1P67809 324 aaKnown RBP5.93□□□□□ -1.46
HMGB1P16-201ENST00000447155 PHC1P78364 1004 aa5.93□□□□□ -1.46
HMGB1P16-201ENST00000447155 ITKQ08881 620 aa5.93□□□□□ -1.46
HMGB1P16-201ENST00000447155 MTMR1Q13613 665 aa5.93□□□□□ -1.46
HMGB1P16-201ENST00000447155 SEC23AQ15436 765 aa5.93□□□□□ -1.46
HMGB1P16-201ENST00000447155 DDB1Q16531 1140 aa5.93□□□□□ -1.46
HMGB1P16-201ENST00000447155 KCNMB1Q16558 191 aa5.93□□□□□ -1.46
HMGB1P16-201ENST00000447155 PLEKHN1Q494U1 663 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P16-201ENST00000447155 GPR158Q5T848 1215 aa5.93□□□□□ -1.46
HMGB1P16-201ENST00000447155 OLFML2BQ68BL8 750 aa5.93□□□□□ -1.46
HMGB1P16-201ENST00000447155 ZC3H14Q6PJT7 736 aaKnown RBP5.93□□□□□ -1.46
HMGB1P16-201ENST00000447155 HDGFL2Q7Z4V5 671 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P16-201ENST00000447155 ARRDC4Q8NCT1 418 aa5.93□□□□□ -1.46
HMGB1P16-201ENST00000447155 COG1Q8WTW3 980 aa5.93□□□□□ -1.46
HMGB1P16-201ENST00000447155 ELF4Q99607 663 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P16-201ENST00000447155 TOMM22Q9NS69 142 aa5.93□□□□□ -1.46
HMGB1P16-201ENST00000447155 KLHL14Q9P2G3 628 aa5.93□□□□□ -1.46
HMGB1P16-201ENST00000447155 HRKO00198 91 aa5.92□□□□□ -1.46
HMGB1P16-201ENST00000447155 C4BPAP04003 597 aaKnown RBP5.92□□□□□ -1.46
HMGB1P16-201ENST00000447155 SDHAP31040 664 aa5.92□□□□□ -1.46
HMGB1P16-201ENST00000447155 LSP1P33241 339 aa5.92□□□□□ -1.46
HMGB1P16-201ENST00000447155 HERVK_113P62684 666 aa5.92□□□□□ -1.46
HMGB1P16-201ENST00000447155 TMEM132BQ14DG7 1078 aa5.92□□□□□ -1.46
HMGB1P16-201ENST00000447155 FAM126BQ8IXS8 530 aa5.92□□□□□ -1.46
HMGB1P16-201ENST00000447155 ZZZ3Q8IYH5 903 aa5.92□□□□□ -1.46
HMGB1P16-201ENST00000447155 CNTD1Q8N815 330 aa5.92□□□□□ -1.46
HMGB1P16-201ENST00000447155 MTMR8Q96EF0 704 aa5.92□□□□□ -1.46
HMGB1P16-201ENST00000447155 MENTQ9BUN1 341 aa5.92□□□□□ -1.46
HMGB1P16-201ENST00000447155 ASPSCR1Q9BZE9 553 aa5.92□□□□□ -1.46
HMGB1P16-201ENST00000447155 KLHL42Q9P2K6 505 aa5.92□□□□□ -1.46
HMGB1P16-201ENST00000447155 PRAMEF25A6NGN4 478 aa5.91□□□□□ -1.46
HMGB1P16-201ENST00000447155 K7ESF4 209 aa5.91□□□□□ -1.46
HMGB1P16-201ENST00000447155 ACOT7O00154 380 aa5.91□□□□□ -1.46
HMGB1P16-201ENST00000447155 PRKD3O94806 890 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms